RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	SYNGAP1	Q96PV0	1343 aa		18.99	■□□□□ 0.63
HDLBP-238	ENST00000479894	GNAI2	P04899	355 aa		18.98	■□□□□ 0.63
HDLBP-238	ENST00000479894	RAG1	P15918	1043 aa		18.98	■□□□□ 0.63
HDLBP-238	ENST00000479894	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.98	■□□□□ 0.63
HDLBP-238	ENST00000479894	BTBD7	Q9P203	1132 aa		18.98	■□□□□ 0.63
HDLBP-238	ENST00000479894	PHF24	Q9UPV7	400 aa		18.98	■□□□□ 0.63
HDLBP-238	ENST00000479894	PA2G4	Q9UQ80	394 aa	Known RBP	18.98	■□□□□ 0.63
HDLBP-238	ENST00000479894	RLBP1	P12271	317 aa		18.97	■□□□□ 0.63
HDLBP-238	ENST00000479894	PPP4C	P60510	307 aa		18.97	■□□□□ 0.63
HDLBP-238	ENST00000479894	FEZ1	Q99689	392 aa		18.97	■□□□□ 0.63
HDLBP-238	ENST00000479894	SLC5A4	Q9NY91	659 aa		18.97	■□□□□ 0.63
HDLBP-238	ENST00000479894	COG6	Q9Y2V7	657 aa		18.97	■□□□□ 0.63
HDLBP-238	ENST00000479894	FLT1	P17948	1338 aa		18.97	■□□□□ 0.63
HDLBP-238	ENST00000479894	HLA-DOA	P06340	250 aa		18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894	ADORA2A	P29274	412 aa		18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894	ARID4A	P29374	1257 aa	Predicted RBP	18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894	ANO1	Q5XXA6	986 aa		18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894	TBC1D9	Q6ZT07	1266 aa		18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894	IL27	Q8NEV9	243 aa		18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894	FERMT2	Q96AC1	680 aa		18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894	KIAA1683	Q9H0B3	1180 aa		18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894		A0A0G2JMZ2	1700 aa		18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.96	■□□□□ 0.63
HDLBP-238	ENST00000479894	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.95	■□□□□ 0.62
HDLBP-238	ENST00000479894	MYCN	P04198	464 aa	Predicted RBP	18.95	■□□□□ 0.62
HDLBP-238	ENST00000479894	NEFL	P07196	543 aa		18.95	■□□□□ 0.62
HDLBP-238	ENST00000479894	VCAM1	P19320	739 aa		18.95	■□□□□ 0.62
HDLBP-238	ENST00000479894	MAPKAPK5	Q8IW41	473 aa		18.95	■□□□□ 0.62
HDLBP-238	ENST00000479894	TGFBRAP1	Q8WUH2	860 aa		18.95	■□□□□ 0.62
HDLBP-238	ENST00000479894	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.95	■□□□□ 0.62
HDLBP-238	ENST00000479894	GBF1	Q92538	1859 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	PIEZO1	Q92508	2521 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	IGSF3	O75054	1194 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	GH2	P01242	217 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	FAM47A	Q5JRC9	791 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	PI16	Q6UXB8	463 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	SHCBP1	Q8NEM2	672 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	PPM1E	Q8WY54	764 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	TOX2	Q96NM4	488 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	MEIS3	Q99687	375 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	LRP2BP	Q9P2M1	347 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	NRBP1	Q9UHY1	535 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	PALD1	Q9ULE6	856 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	TNN	Q9UQP3	1299 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	CHD9	Q3L8U1	2897 aa		18.94	■□□□□ 0.62
HDLBP-238	ENST00000479894	ZYX	Q15942	572 aa	Known RBP	18.93	■□□□□ 0.62
HDLBP-238	ENST00000479894	TATDN1	Q6P1N9	297 aa		18.93	■□□□□ 0.62
HDLBP-238	ENST00000479894	RNF180	Q86T96	592 aa		18.93	■□□□□ 0.62
HDLBP-238	ENST00000479894	ABRA	Q8N0Z2	381 aa		18.93	■□□□□ 0.62
HDLBP-238	ENST00000479894	TMEM39A	Q9NV64	488 aa		18.93	■□□□□ 0.62
HDLBP-238	ENST00000479894	TFCP2	Q12800	502 aa		18.92	■□□□□ 0.62
HDLBP-238	ENST00000479894	NAA16	Q6N069	864 aa	Predicted RBP	18.92	■□□□□ 0.62
HDLBP-238	ENST00000479894	CCDC174	Q6PII3	467 aa		18.92	■□□□□ 0.62
HDLBP-238	ENST00000479894	ANKRD33	Q7Z3H0	272 aa		18.92	■□□□□ 0.62
HDLBP-238	ENST00000479894	MOV10L1	Q9BXT6	1211 aa	Known RBP	18.92	■□□□□ 0.62
HDLBP-238	ENST00000479894	PBX4	Q9BYU1	374 aa		18.92	■□□□□ 0.62
HDLBP-238	ENST00000479894	XPNPEP3	Q9NQH7	507 aa		18.92	■□□□□ 0.62
HDLBP-238	ENST00000479894	ROBO3	Q96MS0	1386 aa		18.92	■□□□□ 0.62
HDLBP-238	ENST00000479894	PQBP1	O60828	265 aa	Known RBP	18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	COBL	O75128	1261 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	UQCRFS1P1	P0C7P4	283 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	RARB	P10826	455 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	MCAM	P43121	646 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	GORAB	Q5T7V8	394 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	C20orf194	Q5TEA3	1177 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	NEUROD6	Q96NK8	337 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.91	■□□□□ 0.62	5e-14	■□□□□ 9
HDLBP-238	ENST00000479894	SPATC1L	Q9H0A9	340 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	PRDM12	Q9H4Q4	367 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	ZBTB40	Q9NUA8	1239 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	HOXC10	Q9NYD6	342 aa		18.91	■□□□□ 0.62
HDLBP-238	ENST00000479894	PARP14	Q460N5	1801 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894		A0A1W2PQ45	241 aa	Predicted RBP	18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894		A0A1W2PQY0	241 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	HMMR	O75330	724 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	TIMP1	P01033	207 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	FAAP100	Q0VG06	881 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	COG2	Q14746	738 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	RASIP1	Q5U651	963 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	SLC44A5	Q8NCS7	719 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	MAML3	Q96JK9	1138 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	MROH8	Q9H579	483 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	HCN4	Q9Y3Q4	1203 aa		18.9	■□□□□ 0.62
HDLBP-238	ENST00000479894	DCDC2C	A8MYV0	355 aa		18.89	■□□□□ 0.61
HDLBP-238	ENST00000479894	ERCC3	P19447	782 aa		18.89	■□□□□ 0.61
HDLBP-238	ENST00000479894	PPIG	Q13427	754 aa	Known RBP eCLIP	18.89	■□□□□ 0.61	1e-14	■□□□□ 8.4
HDLBP-238	ENST00000479894	MTX1	Q13505	466 aa		18.89	■□□□□ 0.61
HDLBP-238	ENST00000479894	ADGRE1	Q14246	886 aa		18.89	■□□□□ 0.61
HDLBP-238	ENST00000479894	PRAMEF19	Q5SWL8	479 aa		18.89	■□□□□ 0.61
HDLBP-238	ENST00000479894	MFSD5	Q6N075	450 aa		18.89	■□□□□ 0.61
HDLBP-238	ENST00000479894	CCDC129	Q6ZRS4	1044 aa		18.89	■□□□□ 0.61
HDLBP-238	ENST00000479894	TSEN34	Q9BSV6	310 aa	Known RBP	18.89	■□□□□ 0.61
HDLBP-238	ENST00000479894	EHD4	Q9H223	541 aa		18.89	■□□□□ 0.61
HDLBP-238	ENST00000479894	CHD7	Q9P2D1	2997 aa		18.88	■□□□□ 0.61
HDLBP-238	ENST00000479894	RAB3GAP1	Q15042	981 aa		18.88	■□□□□ 0.61
HDLBP-238	ENST00000479894	MB21D1	Q8N884	522 aa		18.88	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms