RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 ZNF408Q9H9D4 720 aa6.7□□□□□ -1.34
RBM39-231ENST00000477334 TPX2Q9ULW0 747 aaKnown RBP6.7□□□□□ -1.34
RBM39-231ENST00000477334 U3KQE9 123 aa6.7□□□□□ -1.34
RBM39-231ENST00000477334 TNFRSF10CO14798 259 aa6.69□□□□□ -1.34
RBM39-231ENST00000477334 RGS13O14921 159 aa6.69□□□□□ -1.34
RBM39-231ENST00000477334 ACRP10323 421 aa6.69□□□□□ -1.34
RBM39-231ENST00000477334 GUCY2CP25092 1073 aa6.69□□□□□ -1.34
RBM39-231ENST00000477334 GTF2F1P35269 517 aaKnown RBP eCLIP6.69□□□□□ -1.34
RBM39-231ENST00000477334 PLCL1Q15111 1095 aa6.69□□□□□ -1.34
RBM39-231ENST00000477334 SF3A1Q15459 793 aaKnown RBP6.69□□□□□ -1.34
RBM39-231ENST00000477334 IFI16Q16666 785 aaKnown RBP6.69□□□□□ -1.34
RBM39-231ENST00000477334 CEP131Q9UPN4 1083 aa6.69□□□□□ -1.34
RBM39-231ENST00000477334 CNTNAP4Q9C0A0 1308 aa6.69□□□□□ -1.34
RBM39-231ENST00000477334 UBOX5O94941 541 aa6.68□□□□□ -1.34
RBM39-231ENST00000477334 CEACAM5P06731 702 aa6.68□□□□□ -1.34
RBM39-231ENST00000477334 YBX3P16989 372 aaKnown RBP eCLIP6.68□□□□□ -1.34
RBM39-231ENST00000477334 OXCT1P55809 520 aa6.68□□□□□ -1.34
RBM39-231ENST00000477334 PRKCQQ04759 706 aa6.68□□□□□ -1.34
RBM39-231ENST00000477334 BNIP3Q12983 259 aa6.68□□□□□ -1.34
RBM39-231ENST00000477334 ZYXQ15942 572 aaKnown RBP6.68□□□□□ -1.34
RBM39-231ENST00000477334 OR6P1Q8NGX9 317 aa6.68□□□□□ -1.34
RBM39-231ENST00000477334 DNAJB8Q8NHS0 232 aa6.68□□□□□ -1.34
RBM39-231ENST00000477334 DHX38Q92620 1227 aaKnown RBP6.68□□□□□ -1.34
RBM39-231ENST00000477334 ASIC4Q96FT7 647 aa6.68□□□□□ -1.34
RBM39-231ENST00000477334 HEXIM2Q96MH2 286 aaKnown RBP6.68□□□□□ -1.34
RBM39-231ENST00000477334 PRDM5Q9NQX1 630 aaPredicted RBP6.68□□□□□ -1.34
RBM39-231ENST00000477334 VAV3Q9UKW4 847 aa6.68□□□□□ -1.34
RBM39-231ENST00000477334 SMAD7O15105 426 aaKnown RBP6.67□□□□□ -1.34
RBM39-231ENST00000477334 STK10O94804 968 aaKnown RBP6.67□□□□□ -1.34
RBM39-231ENST00000477334 CHMP4BP1P59074 171 aa6.67□□□□□ -1.34
RBM39-231ENST00000477334 ZNF792Q3KQV3 632 aa6.67□□□□□ -1.34
RBM39-231ENST00000477334 INTS3Q68E01 1043 aaKnown RBP6.67□□□□□ -1.34
RBM39-231ENST00000477334 UNC5AQ6ZN44 842 aa6.67□□□□□ -1.34
RBM39-231ENST00000477334 ARHGAP27Q6ZUM4 889 aa6.67□□□□□ -1.34
RBM39-231ENST00000477334 FAM214BQ7L5A3 538 aa6.67□□□□□ -1.34
RBM39-231ENST00000477334 TTC6Q86TZ1 520 aa6.67□□□□□ -1.34
RBM39-231ENST00000477334 GTF2IRD1Q9UHL9 959 aa6.67□□□□□ -1.34
RBM39-231ENST00000477334 A0A1W2PQH9 124 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 CD8BP10966 210 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 ETV3P41162 512 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 SFRP5Q5T4F7 317 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 ZNF746Q6NUN9 644 aaPredicted RBP6.66□□□□□ -1.34
RBM39-231ENST00000477334 TMEM192Q8IY95 271 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 TAB3Q8N5C8 712 aaPredicted RBP6.66□□□□□ -1.34
RBM39-231ENST00000477334 HRASLS5Q96KN8 279 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 KREMEN1Q96MU8 473 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 SLC6A18Q96N87 628 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 TNKS2Q9H2K2 1166 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 PRKAG3Q9UGI9 489 aa6.66□□□□□ -1.34
RBM39-231ENST00000477334 TMEM265A0A087WTH1 108 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 PRR33A8MZF0 331 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 CLEC3AO75596 197 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 PAPLNO95428 1278 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 CBX7O95931 251 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 ITIH2P19823 946 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 FUT4P22083 530 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 CYP7A1P22680 504 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 CCNFP41002 786 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 OGFOD2Q6N063 350 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 ZNF512BQ96KM6 892 aaPredicted RBP6.65□□□□□ -1.34
RBM39-231ENST00000477334 DRC1Q96MC2 740 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.65□□□□□ -1.34
RBM39-231ENST00000477334 PLAGL2Q9UPG8 496 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 MAPK8IP1Q9UQF2 711 aa6.65□□□□□ -1.34
RBM39-231ENST00000477334 LTBP3Q9NS15 1303 aa6.65□□□□□ -1.35
RBM39-231ENST00000477334 GNAT3A8MTJ3 354 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 CD96P40200 585 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 CASP7P55210 303 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 AOC3Q16853 763 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 TNNI3KQ59H18 835 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 TDRD10Q5VZ19 366 aaKnown RBP6.64□□□□□ -1.35
RBM39-231ENST00000477334 ANKS3Q6ZW76 656 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 C19orf47Q8N9M1 422 aaKnown RBP6.64□□□□□ -1.35
RBM39-231ENST00000477334 HNRNPLLQ8WVV9 542 aaKnown RBP6.64□□□□□ -1.35
RBM39-231ENST00000477334 KRTAP4-9Q9BYQ8 210 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 FAM86C1Q9NVL1 165 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 ACTR10Q9NZ32 417 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 USP35Q9P2H5 1018 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 PCDHB10Q9UN67 800 aa6.64□□□□□ -1.35
RBM39-231ENST00000477334 R3HCC1Q9Y3T6 440 aaKnown RBP6.64□□□□□ -1.35
RBM39-231ENST00000477334 IGF2BP3O00425 579 aaKnown RBP eCLIP6.63□□□□□ -1.35
RBM39-231ENST00000477334 BIN1O00499 593 aa6.63□□□□□ -1.35
RBM39-231ENST00000477334 LRRN2O75325 713 aa6.63□□□□□ -1.35
RBM39-231ENST00000477334 LARP1BQ659C4 914 aaKnown RBP6.63□□□□□ -1.35
RBM39-231ENST00000477334 RNF141Q8WVD5 230 aa6.63□□□□□ -1.35
RBM39-231ENST00000477334 DHRS1Q96LJ7 313 aa6.63□□□□□ -1.35
RBM39-231ENST00000477334 SUCOQ9UBS9 1254 aaKnown RBP6.63□□□□□ -1.35
RBM39-231ENST00000477334 ADAMTS6Q9UKP5 1117 aa6.63□□□□□ -1.35
RBM39-231ENST00000477334 SNX11Q9Y5W9 270 aa6.63□□□□□ -1.35
RBM39-231ENST00000477334 C9IYK1 514 aa6.62□□□□□ -1.35
RBM39-231ENST00000477334 RNASE1P07998 156 aaKnown RBP6.62□□□□□ -1.35
RBM39-231ENST00000477334 NBPF12Q5TAG4 269 aaPredicted RBP6.62□□□□□ -1.35
RBM39-231ENST00000477334 CKAP2LQ8IYA6 745 aa6.62□□□□□ -1.35
RBM39-231ENST00000477334 MFSD4AQ8N468 514 aa6.62□□□□□ -1.35
RBM39-231ENST00000477334 VWCEQ96DN2 955 aa6.62□□□□□ -1.35
RBM39-231ENST00000477334 COX4I2Q96KJ9 171 aa6.62□□□□□ -1.35
RBM39-231ENST00000477334 Q96M66 194 aa6.62□□□□□ -1.35
RBM39-231ENST00000477334 DNAJC2Q99543 621 aaKnown RBP6.62□□□□□ -1.35
RBM39-231ENST00000477334 MKRN2Q9H000 416 aaKnown RBP6.62□□□□□ -1.35
RBM39-231ENST00000477334 RC3H2Q9HBD1 1191 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms