RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 USP17L12C9JPN9 530 aa14.08□□□□□ -0.16
VARS2-208ENST00000477052 USP17L21D6R901 530 aa14.08□□□□□ -0.16
VARS2-208ENST00000477052 PTPREP23469 700 aa14.08□□□□□ -0.16
VARS2-208ENST00000477052 LHX8Q68G74 356 aa14.08□□□□□ -0.16
VARS2-208ENST00000477052 GTF3C2Q8WUA4 911 aaPredicted RBP14.08□□□□□ -0.16
VARS2-208ENST00000477052 CYP2C19P33261 490 aa14.07□□□□□ -0.16
VARS2-208ENST00000477052 CDK8P49336 464 aa14.07□□□□□ -0.16
VARS2-208ENST00000477052 CCNA1P78396 465 aa14.07□□□□□ -0.16
VARS2-208ENST00000477052 ATP2B2Q01814 1243 aa14.07□□□□□ -0.16
VARS2-208ENST00000477052 TMED8Q6PL24 325 aaPredicted RBP14.07□□□□□ -0.16
VARS2-208ENST00000477052 ANKLE1Q8NAG6 615 aa14.07□□□□□ -0.16
VARS2-208ENST00000477052 LRCH3Q96II8 777 aa14.07□□□□□ -0.16
VARS2-208ENST00000477052 MOV10L1Q9BXT6 1211 aaKnown RBP14.07□□□□□ -0.16
VARS2-208ENST00000477052 LRRCC1Q9C099 1032 aa14.07□□□□□ -0.16
VARS2-208ENST00000477052 PUS7LQ9H0K6 701 aaKnown RBP14.07□□□□□ -0.16
VARS2-208ENST00000477052 SLC4A4Q9Y6R1 1079 aa14.07□□□□□ -0.16
VARS2-208ENST00000477052 SLC15A5A6NIM6 579 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 CNGA1P29973 690 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 PLS1Q14651 629 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 COG2Q14746 738 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 C12orf60Q5U649 245 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 ANO1Q5XXA6 986 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 LBX2Q6XYB7 198 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 TMEM179Q6ZVK1 233 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 TRPV1Q8NER1 839 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 ATG4CQ96DT6 458 aa14.06□□□□□ -0.16
VARS2-208ENST00000477052 RAD21O60216 631 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 GLRX3O76003 335 aaKnown RBP14.05□□□□□ -0.16
VARS2-208ENST00000477052 ICA1Q05084 483 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 GRB14Q14449 540 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 LRRC26Q2I0M4 334 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 MFSD14CQ5VZR4 134 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 CTR9Q6PD62 1173 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 TRMT44Q8IYL2 757 aaKnown RBP14.05□□□□□ -0.16
VARS2-208ENST00000477052 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.05□□□□□ -0.161e-10■■■■■ 35.4
VARS2-208ENST00000477052 ATP8A2Q9NTI2 1148 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 FBXO28Q9NVF7 368 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 SWAP70Q9UH65 585 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 IVNS1ABPQ9Y6Y0 642 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 RLFQ13129 1914 aa14.05□□□□□ -0.16
VARS2-208ENST00000477052 MYH8P13535 1937 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 COBLO75128 1261 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 FLOT1O75955 427 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 EEF2P13639 858 aaKnown RBP14.04□□□□□ -0.16
VARS2-208ENST00000477052 ERCC3P19447 782 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 ADORA2AP29274 412 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 DSG3P32926 999 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 MAGEA10P43363 369 aaPredicted RBP14.04□□□□□ -0.16
VARS2-208ENST00000477052 UBE3CQ15386 1083 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 PRAMEF19Q5SWL8 479 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 GDF15Q99988 308 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 SPATC1LQ9H0A9 340 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 ARHGEF10LQ9HCE6 1279 aa14.04□□□□□ -0.16
VARS2-208ENST00000477052 COL6A1P12109 1028 aa14.03□□□□□ -0.16
VARS2-208ENST00000477052 CAPN2P17655 700 aa14.03□□□□□ -0.16
VARS2-208ENST00000477052 C16orf86Q6ZW13 317 aa14.03□□□□□ -0.16
VARS2-208ENST00000477052 DPP9Q86TI2 863 aa14.03□□□□□ -0.16
VARS2-208ENST00000477052 NCAPG2Q86XI2 1143 aa14.03□□□□□ -0.16
VARS2-208ENST00000477052 VCPKMTQ9H867 229 aa14.03□□□□□ -0.16
VARS2-208ENST00000477052 HOXC10Q9NYD6 342 aa14.03□□□□□ -0.16
VARS2-208ENST00000477052 TMX2Q9Y320 296 aa14.03□□□□□ -0.16
VARS2-208ENST00000477052 MYH7P12883 1935 aa14.03□□□□□ -0.16
VARS2-208ENST00000477052 FRMPD3Q5JV73 1810 aa14.02□□□□□ -0.16
VARS2-208ENST00000477052 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.17
VARS2-208ENST00000477052 ATN1P54259 1190 aaPredicted RBP14.02□□□□□ -0.17
VARS2-208ENST00000477052 OSBP2Q969R2 916 aa14.02□□□□□ -0.17
VARS2-208ENST00000477052 STRBPQ96SI9 672 aaKnown RBP14.02□□□□□ -0.17
VARS2-208ENST00000477052 NUP88Q99567 741 aaPredicted RBP14.02□□□□□ -0.17
VARS2-208ENST00000477052 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.02□□□□□ -0.17
VARS2-208ENST00000477052 SENP6Q9GZR1 1112 aaPredicted RBP14.02□□□□□ -0.17
VARS2-208ENST00000477052 CHMP4BQ9H444 224 aaKnown RBP14.02□□□□□ -0.17
VARS2-208ENST00000477052 ECHDC1Q9NTX5 307 aa14.02□□□□□ -0.17
VARS2-208ENST00000477052 DDX20Q9UHI6 824 aaKnown RBP14.02□□□□□ -0.17
VARS2-208ENST00000477052 LAMA3Q16787 3333 aa14.02□□□□□ -0.17
VARS2-208ENST00000477052 GSG1L2A8MUP6 293 aa14.01□□□□□ -0.17
VARS2-208ENST00000477052 MINDY4BA8MYZ0 360 aa14.01□□□□□ -0.17
VARS2-208ENST00000477052 HOXC6P09630 235 aa14.01□□□□□ -0.17
VARS2-208ENST00000477052 MDM2Q00987 491 aaPredicted RBP14.01□□□□□ -0.17
VARS2-208ENST00000477052 TMEM132BQ14DG7 1078 aa14.01□□□□□ -0.17
VARS2-208ENST00000477052 FAM83BQ5T0W9 1011 aa14.01□□□□□ -0.17
VARS2-208ENST00000477052 GJC2Q5T442 439 aaPredicted RBP14.01□□□□□ -0.17
VARS2-208ENST00000477052 ZSCAN25Q6NSZ9 544 aa14.01□□□□□ -0.17
VARS2-208ENST00000477052 AMOTL1Q8IY63 956 aa14.01□□□□□ -0.17
VARS2-208ENST00000477052 OTUD7AQ8TE49 926 aaPredicted RBP14.01□□□□□ -0.17
VARS2-208ENST00000477052 DDRGK1Q96HY6 314 aa14.01□□□□□ -0.17
VARS2-208ENST00000477052 A0A0G2JMZ2 1700 aa14.01□□□□□ -0.17
VARS2-208ENST00000477052 M0R2C6 588 aa14□□□□□ -0.17
VARS2-208ENST00000477052 IGHA2P01877 340 aa14□□□□□ -0.17
VARS2-208ENST00000477052 PGK2P07205 417 aa14□□□□□ -0.17
VARS2-208ENST00000477052 CYBAP13498 195 aa14□□□□□ -0.17
VARS2-208ENST00000477052 LPAR1Q92633 364 aa14□□□□□ -0.17
VARS2-208ENST00000477052 CCDC17Q96LX7 622 aa14□□□□□ -0.17
VARS2-208ENST00000477052 DCTPP1Q9H773 170 aa14□□□□□ -0.17
VARS2-208ENST00000477052 EPB41L4AQ9HCS5 686 aaPredicted RBP14□□□□□ -0.17
VARS2-208ENST00000477052 COL11A1P12107 1806 aaPredicted RBP13.99□□□□□ -0.17
VARS2-208ENST00000477052 PRDM1O75626 825 aa13.99□□□□□ -0.17
VARS2-208ENST00000477052 RASA1P20936 1047 aa13.99□□□□□ -0.17
VARS2-208ENST00000477052 Q7L0L9 218 aa13.99□□□□□ -0.17
VARS2-208ENST00000477052 KBTBD3Q8NAB2 608 aa13.99□□□□□ -0.17
VARS2-208ENST00000477052 CHMP4CQ96CF2 233 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms