RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.56□□□□□ -1.04
FNDC3B-208ENST00000476794 PFDN2Q9UHV9 154 aa8.56□□□□□ -1.04
FNDC3B-208ENST00000476794 C9IYK1 514 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 NFKBIBQ15653 356 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 LETMD1Q6P1Q0 360 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 EEPD1Q7L9B9 569 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 CDH24Q86UP0 819 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 FAM20CQ8IXL6 584 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 ST13P5Q8NFI4 369 aaPredicted RBP8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 RIN3Q8TB24 985 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 SH3TC2Q8TF17 1288 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 KCNF1Q9H3M0 494 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 KANSL2Q9H9L4 492 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 CEP131Q9UPN4 1083 aa8.55□□□□□ -1.04
FNDC3B-208ENST00000476794 FAM95CA0A1B0GW59 222 aa8.54□□□□□ -1.04
FNDC3B-208ENST00000476794 SUSD5O60279 629 aa8.54□□□□□ -1.04
FNDC3B-208ENST00000476794 SLITRK5O94991 958 aa8.54□□□□□ -1.04
FNDC3B-208ENST00000476794 CDK5R2Q13319 367 aa8.54□□□□□ -1.04
FNDC3B-208ENST00000476794 SEZ6L2Q6UXD5 910 aa8.54□□□□□ -1.04
FNDC3B-208ENST00000476794 KRTAP1-3Q8IUG1 177 aa8.54□□□□□ -1.04
FNDC3B-208ENST00000476794 DNAJB8Q8NHS0 232 aa8.54□□□□□ -1.04
FNDC3B-208ENST00000476794 RNF112Q9ULX5 631 aa8.54□□□□□ -1.04
FNDC3B-208ENST00000476794 DIAPH1O60610 1272 aaKnown RBP8.53□□□□□ -1.04
FNDC3B-208ENST00000476794 TCEAL1Q15170 157 aa8.53□□□□□ -1.04
FNDC3B-208ENST00000476794 AXDND1Q5T1B0 1012 aaPredicted RBP8.53□□□□□ -1.04
FNDC3B-208ENST00000476794 NBPF11Q86T75 865 aa8.53□□□□□ -1.04
FNDC3B-208ENST00000476794 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
FNDC3B-208ENST00000476794 CCDC144CPQ8IYA2 1237 aa8.53□□□□□ -1.04
FNDC3B-208ENST00000476794 PRDM10Q9NQV6 1147 aa8.53□□□□□ -1.04
FNDC3B-208ENST00000476794 ZMYM5Q9UJ78 669 aa8.53□□□□□ -1.04
FNDC3B-208ENST00000476794 KDM2BQ8NHM5 1336 aa8.53□□□□□ -1.04
FNDC3B-208ENST00000476794 SSRP1Q08945 709 aaKnown RBP8.52□□□□□ -1.05
FNDC3B-208ENST00000476794 TOP6BLQ8N6T0 577 aa8.52□□□□□ -1.05
FNDC3B-208ENST00000476794 SMARCC1Q92922 1105 aaPredicted RBP8.52□□□□□ -1.05
FNDC3B-208ENST00000476794 KREMEN1Q96MU8 473 aa8.52□□□□□ -1.05
FNDC3B-208ENST00000476794 MKRN2Q9H000 416 aaKnown RBP8.52□□□□□ -1.05
FNDC3B-208ENST00000476794 C1GALT1Q9NS00 363 aa8.52□□□□□ -1.05
FNDC3B-208ENST00000476794 SLC10A6Q3KNW5 377 aa8.51□□□□□ -1.05
FNDC3B-208ENST00000476794 NBPF12Q5TAG4 269 aaPredicted RBP8.51□□□□□ -1.05
FNDC3B-208ENST00000476794 EGFLAMQ63HQ2 1017 aa8.51□□□□□ -1.05
FNDC3B-208ENST00000476794 DCAF15Q66K64 600 aa8.51□□□□□ -1.05
FNDC3B-208ENST00000476794 PAOXQ6QHF9 649 aa8.51□□□□□ -1.05
FNDC3B-208ENST00000476794 PRR23CQ6ZRP0 262 aa8.51□□□□□ -1.05
FNDC3B-208ENST00000476794 ZNF662Q6ZS27 426 aa8.51□□□□□ -1.05
FNDC3B-208ENST00000476794 BEND4Q6ZU67 534 aa8.51□□□□□ -1.05
FNDC3B-208ENST00000476794 RBAK-RBAKDNI3L0D1 243 aa8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 DHX15O43143 795 aaKnown RBP8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 EPHX1P07099 455 aa8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 HSD3B2P26439 372 aa8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 ETV3P41162 512 aa8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 SV2CQ496J9 727 aa8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 HEATR6Q6AI08 1181 aaKnown RBP8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 ZNF669Q96BR6 464 aaPredicted RBP8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 FGD4Q96M96 766 aa8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 HAUS7Q99871 368 aa8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 EPN3Q9H201 632 aa8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 SUSD2Q9UGT4 822 aa8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 TPX2Q9ULW0 747 aaKnown RBP8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 COL17A1Q9UMD9 1497 aaPredicted RBP8.5□□□□□ -1.05
FNDC3B-208ENST00000476794 ESYT3A0FGR9 886 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 ANKRD34BA5PLL1 514 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 ENPP3O14638 875 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 CBFA2T2O43439 604 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 LEFTY1O75610 366 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 RNF4P78317 190 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 C2orf27AQ580R0 203 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 THAP3Q8WTV1 239 aaPredicted RBP8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 VWCEQ96DN2 955 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 APBA2Q99767 749 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 FANCLQ9NW38 375 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 LEMD3Q9Y2U8 911 aa8.49□□□□□ -1.05
FNDC3B-208ENST00000476794 SBNO2Q9Y2G9 1366 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 EOMESO95936 686 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 NAT2P11245 290 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 ZNF143P52747 638 aaPredicted RBP8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 SQSTM1Q13501 440 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 GIMAP7Q8NHV1 300 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 RNF141Q8WVD5 230 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 PPP1R14AQ96A00 147 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 FAM83CQ9BQN1 747 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 DUSP23Q9BVJ7 150 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 SPATA9Q9BWV2 254 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 KLHL25Q9H0H3 589 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 CNTNAP4Q9C0A0 1308 aa8.48□□□□□ -1.05
FNDC3B-208ENST00000476794 ANKRD62A6NC57 917 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 IQCA1LA6NCM1 817 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 CLSTN1O94985 981 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 FAM87AP0C7U9 286 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 AUHQ13825 339 aaKnown RBP8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 ADAT2Q7Z6V5 191 aaKnown RBP8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 C7orf61Q8IZ16 206 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 JMYQ8N9B5 988 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 APPBP2Q92624 585 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 ASPNQ9BXN1 380 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 LRP2BPQ9P2M1 347 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 APEX2Q9UBZ4 518 aa8.47□□□□□ -1.05
FNDC3B-208ENST00000476794 FBXL21Q9UKT6 434 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms