RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TRIOBPQ9H2D6 2365 aa19.4■□□□□ 0.7
COL1A1-205ENST00000476387 A0A1W2PRG0 241 aa19.4■□□□□ 0.7
COL1A1-205ENST00000476387 TRIM32Q13049 653 aa19.4■□□□□ 0.7
COL1A1-205ENST00000476387 C12orf60Q5U649 245 aa19.4■□□□□ 0.7
COL1A1-205ENST00000476387 B4GALNT3Q6L9W6 998 aa19.4■□□□□ 0.7
COL1A1-205ENST00000476387 CCDC17Q96LX7 622 aa19.4■□□□□ 0.7
COL1A1-205ENST00000476387 APBA2Q99767 749 aa19.4■□□□□ 0.7
COL1A1-205ENST00000476387 COLQQ9Y215 455 aaPredicted RBP19.4■□□□□ 0.7
COL1A1-205ENST00000476387 NR2E3Q9Y5X4 410 aa19.4■□□□□ 0.7
COL1A1-205ENST00000476387 SPDYE16A6NNV3 312 aaPredicted RBP19.39■□□□□ 0.69
COL1A1-205ENST00000476387 ZKSCAN1P17029 563 aaPredicted RBP19.39■□□□□ 0.69
COL1A1-205ENST00000476387 PDE1AP54750 535 aa19.39■□□□□ 0.69
COL1A1-205ENST00000476387 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
COL1A1-205ENST00000476387 OSBP2Q969R2 916 aa19.39■□□□□ 0.69
COL1A1-205ENST00000476387 DYNLL2Q96FJ2 89 aa19.39■□□□□ 0.69
COL1A1-205ENST00000476387 STRBPQ96SI9 672 aaKnown RBP19.39■□□□□ 0.69
COL1A1-205ENST00000476387 CWC22Q9HCG8 908 aaKnown RBP19.39■□□□□ 0.69
COL1A1-205ENST00000476387 STAP2Q9UGK3 403 aa19.39■□□□□ 0.69
COL1A1-205ENST00000476387 USP17L12C9JPN9 530 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 USP17L21D6R901 530 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 IGHDP01880 384 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 PRKAR2AP13861 404 aaKnown RBP19.38■□□□□ 0.69
COL1A1-205ENST00000476387 MAP2K5Q13163 448 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 C16orf86Q6ZW13 317 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 NECAB2Q7Z6G3 386 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 LPAR1Q92633 364 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 SH2D4AQ9H788 454 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 ARHGEF10LQ9HCE6 1279 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 HOXC10Q9NYD6 342 aa19.38■□□□□ 0.69
COL1A1-205ENST00000476387 ARPP21Q9UBL0 812 aaPredicted RBP19.38■□□□□ 0.69
COL1A1-205ENST00000476387 SLC15A5A6NIM6 579 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 GPAA1O43292 621 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 AKR1B1P15121 316 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 GNAT2P19087 354 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 CDK8P49336 464 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 ICA1Q05084 483 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 COG2Q14746 738 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 CHD1LQ86WJ1 897 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 BTBD7Q9P203 1132 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 TMX2Q9Y320 296 aa19.37■□□□□ 0.69
COL1A1-205ENST00000476387 M0R2C6 588 aa19.36■□□□□ 0.69
COL1A1-205ENST00000476387 CTR9Q6PD62 1173 aa19.36■□□□□ 0.69
COL1A1-205ENST00000476387 SIAH1Q8IUQ4 282 aa19.36■□□□□ 0.69
COL1A1-205ENST00000476387 EVI5LQ96CN4 794 aa19.36■□□□□ 0.69
COL1A1-205ENST00000476387 PAWRQ96IZ0 340 aaKnown RBP19.36■□□□□ 0.69
COL1A1-205ENST00000476387 TANGO6Q9C0B7 1094 aa19.36■□□□□ 0.69
COL1A1-205ENST00000476387 OGDHLQ9ULD0 1010 aa19.36■□□□□ 0.69
COL1A1-205ENST00000476387 CYP2D7A0A087X1C5 515 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 EVI5O60447 810 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 APPP05067 770 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 PTPREP23469 700 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 TDO2P48775 406 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 NUCB1Q02818 461 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 CACNB2Q08289 660 aaPredicted RBP19.35■□□□□ 0.69
COL1A1-205ENST00000476387 GRB14Q14449 540 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 GIMAP6Q6P9H5 292 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 MB21D1Q8N884 522 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 DIS3LQ8TF46 1054 aaKnown RBP19.35■□□□□ 0.69
COL1A1-205ENST00000476387 IVNS1ABPQ9Y6Y0 642 aa19.35■□□□□ 0.69
COL1A1-205ENST00000476387 RANBP2P49792 3224 aaKnown RBP19.35■□□□□ 0.69
COL1A1-205ENST00000476387 GSG1L2A8MUP6 293 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 HOXC6P09630 235 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 FXR1P51114 621 aaKnown RBP eCLIP19.34■□□□□ 0.69
COL1A1-205ENST00000476387 CCL14Q16627 93 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 SBK1Q52WX2 424 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 ZMYM1Q5SVZ6 1142 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 WDR78Q5VTH9 848 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 CHRDL2Q6WN34 429 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 NBPF3Q9H094 633 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 VCPKMTQ9H867 229 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 KANSL2Q9H9L4 492 aa19.34■□□□□ 0.69
COL1A1-205ENST00000476387 SMIM22K7EJ46 135 aa19.33■□□□□ 0.68
COL1A1-205ENST00000476387 WDR46O15213 610 aaKnown RBP19.33■□□□□ 0.68
COL1A1-205ENST00000476387 MNX1P50219 401 aaPredicted RBP19.33■□□□□ 0.68
COL1A1-205ENST00000476387 KIAA1755Q5JYT7 1200 aa19.33■□□□□ 0.68
COL1A1-205ENST00000476387 SHCBP1Q8NEM2 672 aa19.33■□□□□ 0.68
COL1A1-205ENST00000476387 SEC62Q99442 399 aaKnown RBP19.33■□□□□ 0.68
COL1A1-205ENST00000476387 NACAP1Q9BZK3 213 aa19.33■□□□□ 0.68
COL1A1-205ENST00000476387 RLFQ13129 1914 aa19.33■□□□□ 0.68
COL1A1-205ENST00000476387 A0A0G2JMZ2 1700 aa19.32■□□□□ 0.68
COL1A1-205ENST00000476387 TRIM6-TRIM34B2RNG4 842 aa19.32■□□□□ 0.68
COL1A1-205ENST00000476387 STRNO43815 780 aa19.32■□□□□ 0.68
COL1A1-205ENST00000476387 DSG3P32926 999 aa19.32■□□□□ 0.68
COL1A1-205ENST00000476387 MFSD14CQ5VZR4 134 aa19.32■□□□□ 0.68
COL1A1-205ENST00000476387 CLEC10AQ8IUN9 316 aa19.32■□□□□ 0.68
COL1A1-205ENST00000476387 MOV10L1Q9BXT6 1211 aaKnown RBP19.32■□□□□ 0.68
COL1A1-205ENST00000476387 SPATC1LQ9H0A9 340 aa19.32■□□□□ 0.68
COL1A1-205ENST00000476387 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
COL1A1-205ENST00000476387 GREB1LQ9C091 1923 aaPredicted RBP19.31■□□□□ 0.68
COL1A1-205ENST00000476387 MINDY4BA8MYZ0 360 aa19.31■□□□□ 0.68
COL1A1-205ENST00000476387 FLOT1O75955 427 aa19.31■□□□□ 0.68
COL1A1-205ENST00000476387 SPICE1Q8N0Z3 855 aa19.31■□□□□ 0.68
COL1A1-205ENST00000476387 PRO3102Q9H379 93 aa19.31■□□□□ 0.68
COL1A1-205ENST00000476387 C11orf49Q9H6J7 331 aa19.31■□□□□ 0.68
COL1A1-205ENST00000476387 EPB41L4AQ9HCS5 686 aaPredicted RBP19.31■□□□□ 0.68
COL1A1-205ENST00000476387 MYH4Q9Y623 1939 aa19.31■□□□□ 0.68
COL1A1-205ENST00000476387 ZNF236Q9UL36 1845 aa19.3■□□□□ 0.68
COL1A1-205ENST00000476387 PATL2C9JE40 543 aaKnown RBP19.3■□□□□ 0.68
COL1A1-205ENST00000476387 EEF2P13639 858 aaKnown RBP19.3■□□□□ 0.68
COL1A1-205ENST00000476387 CCND3P30281 292 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms