RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 OPTNQ96CV9 577 aa17.75■□□□□ 0.43
MCF2L-224ENST00000475524 ZNF274Q96GC6 653 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-224ENST00000475524 WNK4Q96J92 1243 aa17.75■□□□□ 0.43
MCF2L-224ENST00000475524 TCEANC2Q96MN5 208 aa17.75■□□□□ 0.43
MCF2L-224ENST00000475524 VCPKMTQ9H867 229 aa17.75■□□□□ 0.43
MCF2L-224ENST00000475524 GOPCQ9HD26 462 aa17.75■□□□□ 0.43
MCF2L-224ENST00000475524 A0A1W2PRG0 241 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 AK2P54819 239 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 APOA5Q6Q788 366 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 USP17L2Q6R6M4 530 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 CATIPQ7Z7H3 387 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 CLEC10AQ8IUN9 316 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 ZNF654Q8IZM8 581 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 SNX21Q969T3 373 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 CCDC102AQ96A19 550 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 GMCL1Q96IK5 515 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 FEZ1Q99689 392 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 LRRC2Q9BYS8 371 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 SLC12A7Q9Y666 1083 aa17.74■□□□□ 0.43
MCF2L-224ENST00000475524 RASSF10A6NK89 507 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 SNHG28P0DPA3 235 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 TROAPQ12815 778 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 SPP2Q13103 211 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 SPRYD7Q5W111 196 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 NFXL1Q6ZNB6 911 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 PROCA1Q8NCQ7 364 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-224ENST00000475524 ACER1Q8TDN7 264 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 DCAF4Q8WV16 495 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 CHMP4CQ96CF2 233 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 OTUD5Q96G74 571 aa17.73■□□□□ 0.43
MCF2L-224ENST00000475524 ZSCAN31Q96LW9 406 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-224ENST00000475524 ABT1Q9ULW3 272 aaKnown RBP17.73■□□□□ 0.43
MCF2L-224ENST00000475524 A0A0G2JLL6 359 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-224ENST00000475524 F5H6K3 240 aa17.72■□□□□ 0.43
MCF2L-224ENST00000475524 SLC10A3P09131 477 aa17.72■□□□□ 0.43
MCF2L-224ENST00000475524 ECE1P42892 770 aa17.72■□□□□ 0.43
MCF2L-224ENST00000475524 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
MCF2L-224ENST00000475524 KLRC3Q07444 240 aa17.72■□□□□ 0.43
MCF2L-224ENST00000475524 SNAPC2Q13487 334 aa17.72■□□□□ 0.43
MCF2L-224ENST00000475524 PRRT2Q7Z6L0 340 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-224ENST00000475524 RASAL3Q86YV0 1011 aa17.72■□□□□ 0.43
MCF2L-224ENST00000475524 GPHNQ9NQX3 736 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-224ENST00000475524 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-224ENST00000475524 LIMCH1Q9UPQ0 1083 aa17.72■□□□□ 0.43
MCF2L-224ENST00000475524 KLF18A0A0U1RQI7 1052 aa17.71■□□□□ 0.43
MCF2L-224ENST00000475524 IRF6O14896 467 aa17.71■□□□□ 0.43
MCF2L-224ENST00000475524 WDR46O15213 610 aaKnown RBP17.71■□□□□ 0.43
MCF2L-224ENST00000475524 ZBTB43O43298 467 aa17.71■□□□□ 0.43
MCF2L-224ENST00000475524 KIF5BP33176 963 aa17.71■□□□□ 0.43
MCF2L-224ENST00000475524 ZNF157P51786 506 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-224ENST00000475524 GTF2A2P52657 109 aa17.71■□□□□ 0.43
MCF2L-224ENST00000475524 MTMR2Q13614 643 aa17.71■□□□□ 0.43
MCF2L-224ENST00000475524 ASPRV1Q53RT3 343 aa17.71■□□□□ 0.43
MCF2L-224ENST00000475524 GPATCH4Q5T3I0 446 aaKnown RBP17.71■□□□□ 0.43
MCF2L-224ENST00000475524 FASTKD5Q7L8L6 764 aaKnown RBP17.71■□□□□ 0.43
MCF2L-224ENST00000475524 CCDC84Q86UT8 332 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-224ENST00000475524 LRRC47Q8N1G4 583 aaKnown RBP17.71■□□□□ 0.43
MCF2L-224ENST00000475524 SENP2Q9HC62 589 aa17.71■□□□□ 0.43
MCF2L-224ENST00000475524 SH2B1Q9NRF2 756 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-224ENST00000475524 PARP14Q460N5 1801 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 TRIM75PA6NK02 468 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 PLA2G6O60733 806 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 NDUFB10O96000 172 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 PDHBP11177 359 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 GJA5P36382 358 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 APOBRQ0VD83 1088 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 GRM4Q14833 912 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 SLFN13Q68D06 897 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 RBM28Q9NW13 759 aaKnown RBP17.7■□□□□ 0.42
MCF2L-224ENST00000475524 TMOD4Q9NZQ9 345 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
MCF2L-224ENST00000475524 THSD7BQ9C0I4 1608 aa17.69■□□□□ 0.42
MCF2L-224ENST00000475524 MANSC4A6NHS7 340 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-224ENST00000475524 GOLGA8BA8MQT2 603 aa17.69■□□□□ 0.42
MCF2L-224ENST00000475524 CETPP11597 493 aa17.69■□□□□ 0.42
MCF2L-224ENST00000475524 PDIA3P30101 505 aaKnown RBP17.69■□□□□ 0.42
MCF2L-224ENST00000475524 GNAQP50148 359 aa17.69■□□□□ 0.42
MCF2L-224ENST00000475524 INHBEP58166 350 aa17.69■□□□□ 0.42
MCF2L-224ENST00000475524 REM2Q8IYK8 340 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-224ENST00000475524 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-224ENST00000475524 EMILIN3Q9NT22 766 aa17.69■□□□□ 0.42
MCF2L-224ENST00000475524 TPCN1Q9ULQ1 816 aa17.69■□□□□ 0.42
MCF2L-224ENST00000475524 TESPA1A2RU30 521 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-224ENST00000475524 PFKFB2O60825 505 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 PARP1P09874 1014 aaKnown RBP17.68■□□□□ 0.42
MCF2L-224ENST00000475524 SMARCA1P28370 1054 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 SLC1A4P43007 532 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 HMGCS2P54868 508 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 DEFB115Q30KQ5 88 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 FANCBQ8NB91 859 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 MS4A4AQ96JQ5 239 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 LZTS2Q9BRK4 669 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 ZCCHC17Q9NP64 241 aaKnown RBP17.68■□□□□ 0.42
MCF2L-224ENST00000475524 SLC45A1Q9Y2W3 748 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 MYPNQ86TC9 1320 aa17.68■□□□□ 0.42
MCF2L-224ENST00000475524 PALM3A6NDB9 673 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms