RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PAX3P23760 479 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 CCT6AP40227 531 aaKnown RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 GCLCP48506 637 aaPredicted RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 MRPS9P82933 396 aaKnown RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 PPARAQ07869 468 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 GOLGA8FQ08AF8 430 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 GOLGA8DPQ0D2H9 430 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L24Q0WX57 530 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 NMIQ13287 307 aaPredicted RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 CFAP100Q494V2 611 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 XRRA1Q6P2D8 792 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 CROCCP2Q86T23 111 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 FSIP1Q8NA03 581 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 URGCPQ8TCY9 931 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 ERO1AQ96HE7 468 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 PPP1R9BQ96SB3 815 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 NUP58Q9BVL2 599 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 CARD14Q9BXL6 1004 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 LARSQ9P2J5 1176 aaKnown RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 CCPG1Q9ULG6 757 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 STXBP3O00186 592 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 PLSCR1O15162 318 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 CETN3O15182 167 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 MYL1P05976 194 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 SKIP12755 728 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 SFPQP23246 707 aaKnown RBP eCLIP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 JAK3P52333 1124 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 KRT83P78385 493 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 NEDD9Q14511 834 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 NOLC1Q14978 699 aaKnown RBP eCLIP5.16□□□□□ -1.586e-7■■■■□ 22.4
CCNL1-215ENST00000474539 CWF19L2Q2TBE0 894 aaKnown RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 ZNF569Q5MCW4 686 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 SMC1BQ8NDV3 1235 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 RAET1EQ8TD07 263 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 TGFBRAP1Q8WUH2 860 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 BRF1Q92994 677 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 TSGA10Q9BZW7 698 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 GZF1Q9H116 711 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 SLC12A6Q9UHW9 1150 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 PUF60Q9UHX1 559 aaKnown RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 CDC42BPBQ9Y5S2 1711 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 MED23Q9ULK4 1368 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 PRPF6O94906 941 aaKnown RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 MYCLP12524 364 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 BMP3P12645 472 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 VEGFAP15692 232 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 GTF2A2P52657 109 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 FCGRTP55899 365 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 BPIFB4P59827 614 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 UBE2HP62256 183 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 FKBP1BP68106 108 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 TDRD12Q587J7 1177 aaKnown RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 PIGBQ92521 554 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 AAASQ9NRG9 546 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 AATFQ9NY61 560 aaKnown RBP eCLIP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 CWC15Q9P013 229 aaKnown RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 ZBTB1Q9Y2K1 713 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 NR2E3Q9Y5X4 410 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 MANSC4A6NHS7 340 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 BCAMP50895 628 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 ARID5AQ03989 594 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 SRGAP1Q7Z6B7 1085 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 NDUFAF2Q8N183 169 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 SSH3Q8TE77 659 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 SECISBP2LQ93073 1101 aaKnown RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 AK8Q96MA6 479 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 PLA2G12BQ9BX93 195 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 MAF1Q9H063 256 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 OSBPL5Q9H0X9 879 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 METTL14Q9HCE5 456 aaKnown RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 IKBKGQ9Y6K9 419 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 VWDEQ8N2E2 1590 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 CA12O43570 354 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 BCRP11274 1271 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 TFAP4Q01664 338 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 EFHBQ8N7U6 833 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 MIGA1Q8NAN2 632 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 PRPF31Q8WWY3 499 aaKnown RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 CALR3Q96L12 384 aaKnown RBP5.16□□□□□ -1.58
CCNL1-215ENST00000474539 HAUS7Q99871 368 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 LGR6Q9HBX8 967 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 FAM8A1Q9UBU6 413 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 FAM50BQ9Y247 325 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 KIAA1210Q9ULL0 1709 aa5.16□□□□□ -1.58
CCNL1-215ENST00000474539 PNPLA6Q8IY17 1366 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 MROH2AA6NES4 1674 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 FSD2A1L4K1 749 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 TCP10L2B9ZVM9 353 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 POLR3GO15318 223 aaPredicted RBP5.15□□□□□ -1.58
CCNL1-215ENST00000474539 HOXA2O43364 376 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 PSAPP07602 524 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 ELF1P32519 619 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 NASPP49321 788 aaPredicted RBP5.15□□□□□ -1.58
CCNL1-215ENST00000474539 STAT2P52630 851 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 Q6ZUG5 572 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 RUFY3Q7L099 469 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 KIAA0825Q8IV33 1275 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 SMC5Q8IY18 1101 aa5.15□□□□□ -1.58
CCNL1-215ENST00000474539 PDCL2Q8N4E4 241 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms