RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ZNF287Q9HBT7 754 aa22.52■■□□□ 1.2
PTCD3-210ENST00000473829 PTCH2Q9Y6C5 1203 aa22.52■■□□□ 1.2
PTCD3-210ENST00000473829 SLC3A2P08195 630 aaKnown RBP22.51■■□□□ 1.19
PTCD3-210ENST00000473829 MFAP1P55081 439 aaKnown RBP22.51■■□□□ 1.19
PTCD3-210ENST00000473829 HAND2P61296 217 aa22.51■■□□□ 1.19
PTCD3-210ENST00000473829 SPICE1Q8N0Z3 855 aa22.51■■□□□ 1.19
PTCD3-210ENST00000473829 CCDC136Q96JN2 1154 aa22.51■■□□□ 1.19
PTCD3-210ENST00000473829 MORF4L1Q9UBU8 362 aa22.51■■□□□ 1.19
PTCD3-210ENST00000473829 FMNL1O95466 1100 aaPredicted RBP22.5■■□□□ 1.19
PTCD3-210ENST00000473829 NEFLP07196 543 aa22.5■■□□□ 1.19
PTCD3-210ENST00000473829 CHMLP26374 656 aa22.5■■□□□ 1.19
PTCD3-210ENST00000473829 FCGRTP55899 365 aa22.5■■□□□ 1.19
PTCD3-210ENST00000473829 ARHGEF6Q15052 776 aa22.5■■□□□ 1.19
PTCD3-210ENST00000473829 CEP95Q96GE4 821 aa22.5■■□□□ 1.19
PTCD3-210ENST00000473829 SH2D4AQ9H788 454 aa22.5■■□□□ 1.19
PTCD3-210ENST00000473829 RBPJLQ9UBG7 517 aa22.5■■□□□ 1.19
PTCD3-210ENST00000473829 DOCK3Q8IZD9 2030 aa22.5■■□□□ 1.19
PTCD3-210ENST00000473829 TFAP4Q01664 338 aa22.49■■□□□ 1.19
PTCD3-210ENST00000473829 TBC1D10CQ8IV04 446 aa22.49■■□□□ 1.19
PTCD3-210ENST00000473829 NEDD1Q8NHV4 660 aa22.49■■□□□ 1.19
PTCD3-210ENST00000473829 NYAP2Q9P242 653 aa22.49■■□□□ 1.19
PTCD3-210ENST00000473829 SRRDQ9UH36 339 aa22.49■■□□□ 1.19
PTCD3-210ENST00000473829 BRCA2P51587 3418 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 PLXNB2O15031 1838 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 SPDYE16A6NNV3 312 aaPredicted RBP22.48■■□□□ 1.19
PTCD3-210ENST00000473829 CNMDO75829 334 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 GNRH1P01148 92 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 FGRP09769 529 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 TSPY3P0CV98 308 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 TSPY8P0CW00 308 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 PRKCZQ05513 592 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 LPAR1Q92633 364 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 PAGR1Q9BTK6 254 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 TANGO6Q9C0B7 1094 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 MTMR4Q9NYA4 1195 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 GABRQQ9UN88 632 aa22.48■■□□□ 1.19
PTCD3-210ENST00000473829 ORC4O43929 436 aa22.47■■□□□ 1.19
PTCD3-210ENST00000473829 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
PTCD3-210ENST00000473829 Q3C1V9 767 aa22.47■■□□□ 1.19
PTCD3-210ENST00000473829 NKX2-3Q8TAU0 364 aa22.47■■□□□ 1.19
PTCD3-210ENST00000473829 DSCC1Q9BVC3 393 aa22.47■■□□□ 1.19
PTCD3-210ENST00000473829 CLIP2Q9UDT6 1046 aa22.47■■□□□ 1.19
PTCD3-210ENST00000473829 MYPNQ86TC9 1320 aa22.47■■□□□ 1.19
PTCD3-210ENST00000473829 RAD50Q92878 1312 aa22.47■■□□□ 1.19
PTCD3-210ENST00000473829 TNPO2O14787 897 aaKnown RBP22.46■■□□□ 1.19
PTCD3-210ENST00000473829 WDR46O15213 610 aaKnown RBP22.46■■□□□ 1.19
PTCD3-210ENST00000473829 NMT2O60551 498 aa22.46■■□□□ 1.19
PTCD3-210ENST00000473829 ERVK-9P63128 1117 aa22.46■■□□□ 1.19
PTCD3-210ENST00000473829 ERVK-24P63145 666 aa22.46■■□□□ 1.19
PTCD3-210ENST00000473829 LBX2Q6XYB7 198 aa22.46■■□□□ 1.19
PTCD3-210ENST00000473829 GOPCQ9HD26 462 aa22.46■■□□□ 1.19
PTCD3-210ENST00000473829 TSPY2A6NKD2 308 aa22.45■■□□□ 1.18
PTCD3-210ENST00000473829 RANBP6O60518 1105 aaKnown RBP22.45■■□□□ 1.18
PTCD3-210ENST00000473829 LRRC47Q8N1G4 583 aaKnown RBP22.45■■□□□ 1.18
PTCD3-210ENST00000473829 GPRC5AQ8NFJ5 357 aa22.45■■□□□ 1.18
PTCD3-210ENST00000473829 GTF3C2Q8WUA4 911 aaPredicted RBP22.45■■□□□ 1.18
PTCD3-210ENST00000473829 NUP88Q99567 741 aaPredicted RBP22.45■■□□□ 1.18
PTCD3-210ENST00000473829 IL17RBQ9NRM6 502 aa22.45■■□□□ 1.18
PTCD3-210ENST00000473829 BTBD7Q9P203 1132 aa22.45■■□□□ 1.18
PTCD3-210ENST00000473829 COL11A1P12107 1806 aaPredicted RBP22.45■■□□□ 1.18
PTCD3-210ENST00000473829 RAD21O60216 631 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 TTLL1O95922 423 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 NDUFB10O96000 172 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 HOXD10P28358 340 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 NEDD4P46934 1319 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 PRMT2P55345 433 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 RRP12Q5JTH9 1297 aaKnown RBP22.44■■□□□ 1.18
PTCD3-210ENST00000473829 FAM83BQ5T0W9 1011 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 STAG1Q8WVM7 1258 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 MKL1Q969V6 931 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 PORCNQ9H237 461 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 TOMM22Q9NS69 142 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 RABGAP1Q9Y3P9 1069 aa22.44■■□□□ 1.18
PTCD3-210ENST00000473829 F5H6K3 240 aa22.43■■□□□ 1.18
PTCD3-210ENST00000473829 FLOT1O75955 427 aa22.43■■□□□ 1.18
PTCD3-210ENST00000473829 KLRC3Q07444 240 aa22.43■■□□□ 1.18
PTCD3-210ENST00000473829 COG2Q14746 738 aa22.43■■□□□ 1.18
PTCD3-210ENST00000473829 AKNAD1Q5T1N1 836 aa22.43■■□□□ 1.18
PTCD3-210ENST00000473829 SH3TC2Q8TF17 1288 aa22.43■■□□□ 1.18
PTCD3-210ENST00000473829 ARMC5Q96C12 935 aa22.43■■□□□ 1.18
PTCD3-210ENST00000473829 FBXO28Q9NVF7 368 aa22.43■■□□□ 1.18
PTCD3-210ENST00000473829 ZNF213O14771 459 aa22.42■■□□□ 1.18
PTCD3-210ENST00000473829 SGSM2O43147 1006 aa22.42■■□□□ 1.18
PTCD3-210ENST00000473829 DSG3P32926 999 aa22.42■■□□□ 1.18
PTCD3-210ENST00000473829 FLT3LGP49771 235 aa22.42■■□□□ 1.18
PTCD3-210ENST00000473829 SOX10P56693 466 aa22.42■■□□□ 1.18
PTCD3-210ENST00000473829 PTH1RQ03431 593 aa22.42■■□□□ 1.18
PTCD3-210ENST00000473829 SLC9C1Q4G0N8 1177 aa22.42■■□□□ 1.18
PTCD3-210ENST00000473829 RUFY2Q8WXA3 655 aa22.42■■□□□ 1.18
PTCD3-210ENST00000473829 ATG4CQ96DT6 458 aa22.42■■□□□ 1.18
PTCD3-210ENST00000473829 NOVP48745 357 aa22.41■■□□□ 1.18
PTCD3-210ENST00000473829 BMP2KLQ5H9B9 411 aa22.41■■□□□ 1.18
PTCD3-210ENST00000473829 SAMD1Q6SPF0 538 aaPredicted RBP22.41■■□□□ 1.18
PTCD3-210ENST00000473829 RAET1EQ8TD07 263 aa22.41■■□□□ 1.18
PTCD3-210ENST00000473829 COA7Q96BR5 231 aa22.41■■□□□ 1.18
PTCD3-210ENST00000473829 HOXC10Q9NYD6 342 aa22.41■■□□□ 1.18
PTCD3-210ENST00000473829 RBBP6Q7Z6E9 1792 aaKnown RBP22.4■■□□□ 1.18
PTCD3-210ENST00000473829 MFSD6Q6ZSS7 791 aa22.4■■□□□ 1.18
PTCD3-210ENST00000473829 RASGRP2Q7LDG7 609 aa22.4■■□□□ 1.18
PTCD3-210ENST00000473829 GMCL1P1Q8NEA9 526 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms