RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	PDLIM7	Q9NR12	457 aa		11.76	□□□□□ -0.53
MCF2L-223	ENST00000473345	SERPINB13	Q9UIV8	391 aa		11.76	□□□□□ -0.53
MCF2L-223	ENST00000473345	ATP11B	Q9Y2G3	1177 aa		11.76	□□□□□ -0.53
MCF2L-223	ENST00000473345	ZNF236	Q9UL36	1845 aa		11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	TAL1	P17542	331 aa	Predicted RBP	11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	ERCC3	P19447	782 aa		11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	USP5	P45974	858 aa		11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	ATP2B2	Q01814	1243 aa		11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	FAM47A	Q5JRC9	791 aa		11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	FERMT2	Q96AC1	680 aa		11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	LENG1	Q96BZ8	264 aa	Predicted RBP	11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	DYNLL2	Q96FJ2	89 aa		11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	TRIM34	Q9BYJ4	488 aa		11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	SEMA6B	Q9H3T3	888 aa		11.75	□□□□□ -0.53
MCF2L-223	ENST00000473345	CDH23	Q9H251	3354 aa		11.74	□□□□□ -0.53
MCF2L-223	ENST00000473345	CYP2D7	A0A087X1C5	515 aa		11.74	□□□□□ -0.53
MCF2L-223	ENST00000473345	TCRBV5S4A2T	A0A5A2	114 aa		11.74	□□□□□ -0.53
MCF2L-223	ENST00000473345	IRX5	P78411	483 aa	Predicted RBP	11.74	□□□□□ -0.53
MCF2L-223	ENST00000473345	CCAR1	Q8IX12	1150 aa	Known RBP	11.74	□□□□□ -0.53
MCF2L-223	ENST00000473345	SDR42E1	Q8WUS8	393 aa		11.74	□□□□□ -0.53
MCF2L-223	ENST00000473345	MYLIP	Q8WY64	445 aa		11.74	□□□□□ -0.53
MCF2L-223	ENST00000473345	ATG4C	Q96DT6	458 aa		11.74	□□□□□ -0.53
MCF2L-223	ENST00000473345	SPATC1L	Q9H0A9	340 aa		11.74	□□□□□ -0.53
MCF2L-223	ENST00000473345	PRKAB2	O43741	272 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	AKR1B1	P15121	316 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	ADCYAP1R1	P41586	468 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	OS9	Q13438	667 aa	Predicted RBP	11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	LRRC41	Q15345	812 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	OLFML2B	Q68BL8	750 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	SPICE1	Q8N0Z3	855 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	LCORL	Q8N3X6	602 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	USP38	Q8NB14	1042 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	FBXO28	Q9NVF7	368 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	EXOC6B	Q9Y2D4	811 aa		11.73	□□□□□ -0.53
MCF2L-223	ENST00000473345	NAV1	Q8NEY1	1877 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	SEPT4	O43236	478 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	PDE6A	P16499	860 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	USP14	P54578	494 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	CCNA1	P78396	465 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	TMEM132B	Q14DG7	1078 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	CEP85	Q6P2H3	762 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	MAML3	Q96JK9	1138 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	CWC22	Q9HCG8	908 aa	Known RBP	11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	IL1RAPL2	Q9NP60	686 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	PRUNE2	Q8WUY3	3088 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	PARP14	Q460N5	1801 aa		11.72	□□□□□ -0.53
MCF2L-223	ENST00000473345	IPO8	O15397	1037 aa	Known RBP	11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	PGK2	P07205	417 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	DSG3	P32926	999 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	TLE2	Q04725	743 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	COG2	Q14746	738 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	ZNF697	Q5TEC3	545 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	ZKSCAN2	Q63HK3	967 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	DPP9	Q86TI2	863 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	TTC6	Q86TZ1	520 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	AACS	Q86V21	672 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	MAFA	Q8NHW3	353 aa	Predicted RBP	11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	PRDM6	Q9NQX0	595 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	IVNS1ABP	Q9Y6Y0	642 aa		11.71	□□□□□ -0.53
MCF2L-223	ENST00000473345	ZNF532	Q9HCE3	1301 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	MAGEB6P1	A0A0J9YX57	407 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	ADCY6	O43306	1168 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	MSC	O60682	206 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	GLRX3	O76003	335 aa	Known RBP	11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	PGK1	P00558	417 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	MYCN	P04198	464 aa	Predicted RBP	11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	SHCBP1	Q8NEM2	672 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	REPS2	Q8NFH8	660 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	TANGO6	Q9C0B7	1094 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	ARMT1	Q9H993	441 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	MCM9	Q9NXL9	1143 aa		11.7	□□□□□ -0.54
MCF2L-223	ENST00000473345	MYADML2	A6NDP7	307 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	MPHOSPH10	O00566	681 aa	Known RBP	11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	POLR3D	P05423	398 aa	Predicted RBP	11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	MAP3K12	Q12852	859 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	PLS1	Q14651	629 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	GRIN2C	Q14957	1233 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	NCAPG2	Q86XI2	1143 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	SIRT2	Q8IXJ6	389 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	CABP5	Q9NP86	173 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	ADAMTS5	Q9UNA0	930 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	PHF24	Q9UPV7	400 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345	TMX2	Q9Y320	296 aa		11.69	□□□□□ -0.54
MCF2L-223	ENST00000473345		A0A1W2PQ45	241 aa	Predicted RBP	11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345		A0A1W2PQY0	241 aa		11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345	RBAK-RBAKDN	I3L0D1	243 aa		11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345	GOLIM4	O00461	696 aa		11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345	STRN	O43815	780 aa		11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345	IGSF3	O75054	1194 aa		11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345	ADAMTS4	O75173	837 aa		11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345	FLOT1	O75955	427 aa		11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345	SMAD3	P84022	425 aa	Known RBP	11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345	ZNF792	Q3KQV3	632 aa		11.68	□□□□□ -0.54
MCF2L-223	ENST00000473345	SLC9C2	Q5TAH2	1124 aa		11.68	□□□□□ -0.54

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