RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 HLA-CQ95604 372 aa12.71□□□□□ -0.37
CDHR3-209ENST00000472116 NOL10Q9BSC4 688 aaKnown RBP12.71□□□□□ -0.37
CDHR3-209ENST00000472116 DHX36Q9H2U1 1008 aaKnown RBP12.71□□□□□ -0.37
CDHR3-209ENST00000472116 BRWD1Q9NSI6 2320 aa12.71□□□□□ -0.38
CDHR3-209ENST00000472116 ZDBF2Q9HCK1 2354 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 SIPA1L1O43166 1804 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 REV3LO60673 3130 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 GPR75-ASB3A0A0A6YYF3 556 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 EYA2O00167 538 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 CNMDO75829 334 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 NBPF7P0C2Y1 421 aaPredicted RBP12.7□□□□□ -0.38
CDHR3-209ENST00000472116 ACRP10323 421 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 CSF2RAP15509 400 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 GSTO1P78417 241 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 FOXK2Q01167 660 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 PRAMEF19Q5SWL8 479 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 KAZALD1Q96I82 304 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 ZBTB21Q9ULJ3 1066 aa12.7□□□□□ -0.38
CDHR3-209ENST00000472116 XIRP2A4UGR9 3374 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 CHD9Q3L8U1 2897 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 A0A0G2JMZ2 1700 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 GDF11O95390 407 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 PGK1P00558 417 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 FGBP02675 491 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 ALADP13716 330 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 USP14P54578 494 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 RHBDL3P58872 404 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
CDHR3-209ENST00000472116 TEX11Q8IYF3 940 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDHR3-209ENST00000472116 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 NRBP1Q9UHY1 535 aa12.69□□□□□ -0.38
CDHR3-209ENST00000472116 YBX2Q9Y2T7 364 aaKnown RBP12.69□□□□□ -0.38
CDHR3-209ENST00000472116 FOCADQ5VW36 1801 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 TLR3O15455 904 aaKnown RBP12.68□□□□□ -0.38
CDHR3-209ENST00000472116 PHKA1P46020 1223 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 LBX2Q6XYB7 198 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 CATSPERGQ6ZRH7 1159 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 C16orf59Q7L2K0 433 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 FBXL18Q96ME1 805 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 TSEN34Q9BSV6 310 aaKnown RBP12.68□□□□□ -0.38
CDHR3-209ENST00000472116 PPP1R12CQ9BZL4 782 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 IL23AQ9NPF7 189 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 CEP126Q9P2H0 1117 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 TBX21Q9UL17 535 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 CHD7Q9P2D1 2997 aa12.68□□□□□ -0.38
CDHR3-209ENST00000472116 MYH1P12882 1939 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 MOXD2PA6NHM9 499 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 ST18O60284 1047 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 IGHA2P01877 340 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 SSTR3P32745 418 aaPredicted RBP12.67□□□□□ -0.38
CDHR3-209ENST00000472116 MECOMQ03112 1051 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
CDHR3-209ENST00000472116 ANKRD44Q8N8A2 993 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 VTI1AQ96AJ9 217 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 C12orf42Q96LP6 360 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 GLT1D1Q96MS3 346 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 BTBD7Q9P203 1132 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 PCDHA11Q9Y5I1 949 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 MTCH2Q9Y6C9 303 aa12.67□□□□□ -0.38
CDHR3-209ENST00000472116 PDS5AQ29RF7 1337 aaKnown RBP12.66□□□□□ -0.38
CDHR3-209ENST00000472116 AKR1A1P14550 325 aa12.66□□□□□ -0.38
CDHR3-209ENST00000472116 POU3F3P20264 500 aaPredicted RBP12.66□□□□□ -0.38
CDHR3-209ENST00000472116 ACLYP53396 1101 aa12.66□□□□□ -0.38
CDHR3-209ENST00000472116 SHCBP1Q8NEM2 672 aa12.66□□□□□ -0.38
CDHR3-209ENST00000472116 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
CDHR3-209ENST00000472116 SLC4A7Q9Y6M7 1214 aa12.66□□□□□ -0.38
CDHR3-209ENST00000472116 ZNF318Q5VUA4 2279 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
CDHR3-209ENST00000472116 HLA-DOAP06340 250 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 VCAM1P19320 739 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 RABGGTBP53611 331 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 CCDC102BQ68D86 513 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 OTOP2Q7RTS6 562 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 NCAPG2Q86XI2 1143 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 GJD3Q8N144 294 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 MAML3Q96JK9 1138 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 MOV10L1Q9BXT6 1211 aaKnown RBP12.65□□□□□ -0.38
CDHR3-209ENST00000472116 MROH8Q9H579 483 aa12.65□□□□□ -0.38
CDHR3-209ENST00000472116 ZBBXA8MT70 800 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 COBLO75128 1261 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 VAMP4O75379 141 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 PLCG2P16885 1265 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 ERCC3P19447 782 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 RASGRF1Q13972 1273 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 PLS1Q14651 629 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 TMEM67Q5HYA8 995 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 ABRAQ8N0Z2 381 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 SPATC1LQ9H0A9 340 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 SIL1Q9H173 461 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 HOXC10Q9NYD6 342 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 CNPY2Q9Y2B0 182 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 ROBO3Q96MS0 1386 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 TRANK1O15050 2925 aa12.64□□□□□ -0.39
CDHR3-209ENST00000472116 ELP1O95163 1332 aa12.63□□□□□ -0.39
CDHR3-209ENST00000472116 IL16Q14005 1332 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms