RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
FDPS-208ENST00000470171 NEDD1Q8NHV4 660 aa18.35■□□□□ 0.53
FDPS-208ENST00000470171 CCDC171Q6TFL3 1326 aa18.34■□□□□ 0.53
FDPS-208ENST00000470171 STRNO43815 780 aa18.34■□□□□ 0.53
FDPS-208ENST00000470171 TTLL1O95922 423 aa18.34■□□□□ 0.53
FDPS-208ENST00000470171 COPB2P35606 906 aa18.34■□□□□ 0.53
FDPS-208ENST00000470171 CAP1Q01518 475 aa18.34■□□□□ 0.53
FDPS-208ENST00000470171 NUDT12Q9BQG2 462 aa18.34■□□□□ 0.53
FDPS-208ENST00000470171 RNF41Q9H4P4 317 aaPredicted RBP18.34■□□□□ 0.53
FDPS-208ENST00000470171 MYH1P12882 1939 aa18.33■□□□□ 0.53
FDPS-208ENST00000470171 PLIN4Q96Q06 1357 aa18.33■□□□□ 0.53
FDPS-208ENST00000470171 PHIPQ8WWQ0 1821 aa18.33■□□□□ 0.53
FDPS-208ENST00000470171 LOC285556D6RIA3 1793 aa18.33■□□□□ 0.53
FDPS-208ENST00000470171 IGKV6D-41A0A0C4DH26 115 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 ORC4O43929 436 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 ADCY3O60266 1144 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 FGRP09769 529 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 FDX1P10109 184 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 EVX2Q03828 476 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 SHCBP1Q8NEM2 672 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 TANGO6Q9C0B7 1094 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 CWC22Q9HCG8 908 aaKnown RBP18.33■□□□□ 0.52
FDPS-208ENST00000470171 MTMR4Q9NYA4 1195 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 CTNNA3Q9UI47 895 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 NAV1Q8NEY1 1877 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 CDK5RAP2Q96SN8 1893 aa18.33■□□□□ 0.52
FDPS-208ENST00000470171 FGAP02671 866 aa18.32■□□□□ 0.52
FDPS-208ENST00000470171 HSPD1P10809 573 aaKnown RBP18.32■□□□□ 0.52
FDPS-208ENST00000470171 DSG3P32926 999 aa18.32■□□□□ 0.52
FDPS-208ENST00000470171 SOX10P56693 466 aa18.32■□□□□ 0.52
FDPS-208ENST00000470171 ATP2B2Q01814 1243 aa18.32■□□□□ 0.52
FDPS-208ENST00000470171 NMIQ13287 307 aaPredicted RBP18.32■□□□□ 0.52
FDPS-208ENST00000470171 PLEKHH3Q7Z736 793 aa18.32■□□□□ 0.52
FDPS-208ENST00000470171 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
FDPS-208ENST00000470171 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.529e-12■□□□□ 8.1
FDPS-208ENST00000470171 BIN2Q9UBW5 565 aaPredicted RBP18.32■□□□□ 0.52
FDPS-208ENST00000470171 GJD2Q9UKL4 321 aa18.32■□□□□ 0.52
FDPS-208ENST00000470171 IVNS1ABPQ9Y6Y0 642 aa18.32■□□□□ 0.52
FDPS-208ENST00000470171 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 SPDYE16A6NNV3 312 aaPredicted RBP18.31■□□□□ 0.52
FDPS-208ENST00000470171 FLOT1O75955 427 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 SLC25A27O95847 323 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 RGS2P41220 211 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 TFAP4Q01664 338 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 CCDC178Q5BJE1 867 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 TTC22Q5TAA0 569 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 GMCL1P1Q8NEA9 526 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 MROH8Q9H579 483 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 TXNRD2Q9NNW7 524 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 SLC5A4Q9NY91 659 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 ADAMTS5Q9UNA0 930 aa18.31■□□□□ 0.52
FDPS-208ENST00000470171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.31■□□□□ 0.52
FDPS-208ENST00000470171 RAD50Q92878 1312 aa18.3■□□□□ 0.52
FDPS-208ENST00000470171 SLC15A5A6NIM6 579 aa18.3■□□□□ 0.52
FDPS-208ENST00000470171 TSPY2A6NKD2 308 aa18.3■□□□□ 0.52
FDPS-208ENST00000470171 F5H6K3 240 aa18.3■□□□□ 0.52
FDPS-208ENST00000470171 KLRC3Q07444 240 aa18.3■□□□□ 0.52
FDPS-208ENST00000470171 ABRAQ8N0Z2 381 aa18.3■□□□□ 0.52
FDPS-208ENST00000470171 DSCC1Q9BVC3 393 aa18.3■□□□□ 0.52
FDPS-208ENST00000470171 TCP11L1Q9NUJ3 509 aa18.3■□□□□ 0.52
FDPS-208ENST00000470171 CLIP2Q9UDT6 1046 aa18.3■□□□□ 0.52
FDPS-208ENST00000470171 FOXP2O15409 715 aa18.29■□□□□ 0.52
FDPS-208ENST00000470171 HMGCRP04035 888 aa18.29■□□□□ 0.52
FDPS-208ENST00000470171 GJB1P08034 283 aa18.29■□□□□ 0.52
FDPS-208ENST00000470171 Q3C1V9 767 aa18.29■□□□□ 0.52
FDPS-208ENST00000470171 CCDC129Q6ZRS4 1044 aa18.29■□□□□ 0.52
FDPS-208ENST00000470171 CENPQQ7L2Z9 268 aaPredicted RBP18.29■□□□□ 0.52
FDPS-208ENST00000470171 GPR142Q7Z601 462 aa18.29■□□□□ 0.52
FDPS-208ENST00000470171 PRPF38AQ8NAV1 312 aaKnown RBP18.29■□□□□ 0.52
FDPS-208ENST00000470171 SH3TC2Q8TF17 1288 aa18.29■□□□□ 0.52
FDPS-208ENST00000470171 TTC14Q96N46 770 aa18.29■□□□□ 0.52
FDPS-208ENST00000470171 GABRQQ9UN88 632 aa18.29■□□□□ 0.52
FDPS-208ENST00000470171 ZNF213O14771 459 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 HOXC6P09630 235 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
FDPS-208ENST00000470171 MORN1Q5T089 497 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 RCSD1Q6JBY9 416 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
FDPS-208ENST00000470171 MFSD6Q6ZSS7 791 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 SPICE1Q8N0Z3 855 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 CEP95Q96GE4 821 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 SPATC1LQ9H0A9 340 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 FEM1BQ9UK73 627 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 PPP1R9AQ9ULJ8 1098 aa18.28■□□□□ 0.52
FDPS-208ENST00000470171 SMIM22K7EJ46 135 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 PLA2G6O60733 806 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 PRDM1O75626 825 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 CNMDO75829 334 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 PTPREP23469 700 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 GJA8P48165 433 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 NOVP48745 357 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 AKNAD1Q5T1N1 836 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 STAG1Q8WVM7 1258 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 USP6NLQ92738 828 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 GMCL1Q96IK5 515 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 APBA2Q99767 749 aa18.27■□□□□ 0.52
FDPS-208ENST00000470171 RNF208Q9H0X6 261 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms