RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 NCOA5Q9HCD5 579 aaKnown RBP14.85□□□□□ -0.03
TRAF4-208ENST00000469529 CLIP2Q9UDT6 1046 aa14.85□□□□□ -0.03
TRAF4-208ENST00000469529 PTPDC1A2A3K4 754 aa14.84□□□□□ -0.03
TRAF4-208ENST00000469529 PRPF3O43395 683 aaKnown RBP14.84□□□□□ -0.03
TRAF4-208ENST00000469529 FMNL1O95466 1100 aaPredicted RBP14.84□□□□□ -0.03
TRAF4-208ENST00000469529 GH2P01242 217 aa14.84□□□□□ -0.03
TRAF4-208ENST00000469529 SLURP2P0DP57 97 aa14.84□□□□□ -0.03
TRAF4-208ENST00000469529 RAB3GAP1Q15042 981 aa14.84□□□□□ -0.03
TRAF4-208ENST00000469529 MIGA2Q7L4E1 593 aa14.84□□□□□ -0.03
TRAF4-208ENST00000469529 NBPF11Q86T75 865 aa14.84□□□□□ -0.03
TRAF4-208ENST00000469529 FAM177A1Q8N128 213 aaPredicted RBP14.84□□□□□ -0.03
TRAF4-208ENST00000469529 GMCL1P1Q8NEA9 526 aa14.84□□□□□ -0.03
TRAF4-208ENST00000469529 CTCFLQ8NI51 663 aaPredicted RBP14.84□□□□□ -0.03
TRAF4-208ENST00000469529 RNF26Q9BY78 433 aaPredicted RBP14.84□□□□□ -0.03
TRAF4-208ENST00000469529 RBM27Q9P2N5 1060 aaKnown RBP14.84□□□□□ -0.03
TRAF4-208ENST00000469529 UNCXA6NJT0 531 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 TMEM88BA6NKF7 163 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 FAM196BA6NMK8 535 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 MPHOSPH10O00566 681 aaKnown RBP14.83□□□□□ -0.04
TRAF4-208ENST00000469529 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
TRAF4-208ENST00000469529 SYT1P21579 422 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 SEPT2Q15019 361 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 NOL9Q5SY16 702 aaKnown RBP14.83□□□□□ -0.04
TRAF4-208ENST00000469529 LARP1BQ659C4 914 aaKnown RBP14.83□□□□□ -0.04
TRAF4-208ENST00000469529 TMTC3Q6ZXV5 915 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 CDC37L1Q7L3B6 337 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 NUP133Q8WUM0 1156 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 WASF1Q92558 559 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 MYL10Q9BUA6 226 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 MAD2L2Q9UI95 211 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 ZBTB21Q9ULJ3 1066 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 NAP1L2Q9ULW6 460 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-208ENST00000469529 TMX2Q9Y320 296 aa14.83□□□□□ -0.04
TRAF4-208ENST00000469529 SIPA1L1O43166 1804 aa14.82□□□□□ -0.04
TRAF4-208ENST00000469529 STX6O43752 255 aa14.82□□□□□ -0.04
TRAF4-208ENST00000469529 JAK2O60674 1132 aa14.82□□□□□ -0.04
TRAF4-208ENST00000469529 ICA1Q05084 483 aa14.82□□□□□ -0.04
TRAF4-208ENST00000469529 SSRP1Q08945 709 aaKnown RBP14.82□□□□□ -0.04
TRAF4-208ENST00000469529 MAP3K11Q16584 847 aa14.82□□□□□ -0.04
TRAF4-208ENST00000469529 ASPRV1Q53RT3 343 aa14.82□□□□□ -0.04
TRAF4-208ENST00000469529 GPATCH4Q5T3I0 446 aaKnown RBP14.82□□□□□ -0.04
TRAF4-208ENST00000469529 KRT26Q7Z3Y9 468 aa14.82□□□□□ -0.04
TRAF4-208ENST00000469529 ZDHHC9Q9Y397 364 aa14.82□□□□□ -0.04
TRAF4-208ENST00000469529 WDR33Q9C0J8 1336 aaKnown RBP14.82□□□□□ -0.04
TRAF4-208ENST00000469529 USP2O75604 605 aaPredicted RBP14.81□□□□□ -0.04
TRAF4-208ENST00000469529 DEXIO95424 95 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 PARP1P09874 1014 aaKnown RBP14.81□□□□□ -0.04
TRAF4-208ENST00000469529 PDHBP11177 359 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 RXRAP19793 462 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 USP48Q86UV5 1035 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 TRIM22Q8IYM9 498 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 FAM184AQ8NB25 1140 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 DCAF4Q8WV16 495 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 GMCL1Q96IK5 515 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 WDR18Q9BV38 432 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 SPZ1Q9BXG8 430 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 SH2D4AQ9H788 454 aa14.81□□□□□ -0.04
TRAF4-208ENST00000469529 ORC3Q9UBD5 711 aaPredicted RBP14.81□□□□□ -0.04
TRAF4-208ENST00000469529 GREB1LQ9C091 1923 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-208ENST00000469529 F5H6K3 240 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 PPP1R12BO60237 982 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-208ENST00000469529 PLA2G6O60733 806 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 GDF11O95390 407 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 KLRC3Q07444 240 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 ZNF543Q08ER8 600 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 SCYL3Q8IZE3 742 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 SRBD1Q8N5C6 995 aaKnown RBP14.8□□□□□ -0.04
TRAF4-208ENST00000469529 FBXO18Q8NFZ0 1043 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.8□□□□□ -0.043e-6■■■■□ 21.3
TRAF4-208ENST00000469529 RIOX1Q9H6W3 641 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 ARHGEF10LQ9HCE6 1279 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 MTMR6Q9Y217 621 aa14.8□□□□□ -0.04
TRAF4-208ENST00000469529 A0A1W2PRG0 241 aa14.79□□□□□ -0.04
TRAF4-208ENST00000469529 USP17L5A8MUK1 530 aa14.79□□□□□ -0.04
TRAF4-208ENST00000469529 KLRF2D3W0D1 207 aa14.79□□□□□ -0.04
TRAF4-208ENST00000469529 ZSCAN22P10073 491 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-208ENST00000469529 MAP3K9P80192 1104 aa14.79□□□□□ -0.04
TRAF4-208ENST00000469529 FMR1Q06787 632 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAF4-208ENST00000469529 BTNL9Q6UXG8 535 aa14.79□□□□□ -0.04
TRAF4-208ENST00000469529 KIAA1683Q9H0B3 1180 aa14.79□□□□□ -0.04
TRAF4-208ENST00000469529 SCAF8Q9UPN6 1271 aaKnown RBP14.79□□□□□ -0.04
TRAF4-208ENST00000469529 TRAF5O00463 557 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 PLEKHA8P1O95397 391 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 PKN1Q16512 942 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 SHROOM1Q2M3G4 852 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-208ENST00000469529 SLFN13Q68D06 897 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 RAB11FIP4Q86YS3 637 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 CCDC144CPQ8IYA2 1237 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 STAG2Q8N3U4 1231 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 MTMR8Q96EF0 704 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 DDX11Q96FC9 970 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 SLC26A6Q9BXS9 759 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 SH3GLB2Q9NR46 395 aa14.78□□□□□ -0.04
TRAF4-208ENST00000469529 V9GY48 417 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-208ENST00000469529 PTPRAP18433 802 aa14.77□□□□□ -0.05
TRAF4-208ENST00000469529 NF2P35240 595 aa14.77□□□□□ -0.05
TRAF4-208ENST00000469529 IREB2P48200 963 aaKnown RBP14.77□□□□□ -0.05
TRAF4-208ENST00000469529 AKAP17AQ02040 695 aaKnown RBP14.77□□□□□ -0.05
TRAF4-208ENST00000469529 PKP1Q13835 747 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms