RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 PXYLP1Q8TE99 480 aa21.04■□□□□ 0.96
SF1-212ENST00000463343 HTATIP2Q9BUP3 242 aa21.04■□□□□ 0.96
SF1-212ENST00000463343 ZNF287Q9HBT7 754 aa21.04■□□□□ 0.96
SF1-212ENST00000463343 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.04■□□□□ 0.96
SF1-212ENST00000463343 A0A1W2PRG0 241 aa21.03■□□□□ 0.96
SF1-212ENST00000463343 FGRP09769 529 aa21.03■□□□□ 0.96
SF1-212ENST00000463343 HAND2P61296 217 aa21.03■□□□□ 0.96
SF1-212ENST00000463343 PRKCZQ05513 592 aa21.03■□□□□ 0.96
SF1-212ENST00000463343 TREML2Q5T2D2 321 aa21.03■□□□□ 0.96
SF1-212ENST00000463343 CLEC10AQ8IUN9 316 aa21.03■□□□□ 0.96
SF1-212ENST00000463343 PROCA1Q8NCQ7 364 aaPredicted RBP21.03■□□□□ 0.96
SF1-212ENST00000463343 RNF208Q9H0X6 261 aa21.03■□□□□ 0.96
SF1-212ENST00000463343 EMILIN3Q9NT22 766 aa21.03■□□□□ 0.96
SF1-212ENST00000463343 PTPRFP10586 1907 aa21.02■□□□□ 0.96
SF1-212ENST00000463343 PTH1RQ03431 593 aa21.02■□□□□ 0.96
SF1-212ENST00000463343 USP17L2Q6R6M4 530 aa21.02■□□□□ 0.96
SF1-212ENST00000463343 NBPF3Q9H094 633 aa21.02■□□□□ 0.96
SF1-212ENST00000463343 KIAA1683Q9H0B3 1180 aa21.02■□□□□ 0.96
SF1-212ENST00000463343 BIN2Q9UBW5 565 aaPredicted RBP21.02■□□□□ 0.96
SF1-212ENST00000463343 AGTPBP1Q9UPW5 1226 aa21.02■□□□□ 0.96
SF1-212ENST00000463343 FAM47AQ5JRC9 791 aa21.01■□□□□ 0.95
SF1-212ENST00000463343 DPF3Q92784 378 aa21.01■□□□□ 0.95
SF1-212ENST00000463343 ESYT1Q9BSJ8 1104 aa21.01■□□□□ 0.95
SF1-212ENST00000463343 KANSL2Q9H9L4 492 aa21.01■□□□□ 0.95
SF1-212ENST00000463343 TMOD4Q9NZQ9 345 aa21.01■□□□□ 0.95
SF1-212ENST00000463343 ZNF213O14771 459 aa21■□□□□ 0.95
SF1-212ENST00000463343 ORC4O43929 436 aa21■□□□□ 0.95
SF1-212ENST00000463343 ADCY3O60266 1144 aa21■□□□□ 0.95
SF1-212ENST00000463343 ECM2O94769 699 aaPredicted RBP21■□□□□ 0.95
SF1-212ENST00000463343 SGPL1O95470 568 aa21■□□□□ 0.95
SF1-212ENST00000463343 TFAP4Q01664 338 aa21■□□□□ 0.95
SF1-212ENST00000463343 NEDD1Q8NHV4 660 aa21■□□□□ 0.95
SF1-212ENST00000463343 U2AF1L4Q8WU68 220 aaKnown RBP21■□□□□ 0.95
SF1-212ENST00000463343 CTNNA3Q9UI47 895 aa21■□□□□ 0.95
SF1-212ENST00000463343 GABRQQ9UN88 632 aa21■□□□□ 0.95
SF1-212ENST00000463343 IGKV6D-41A0A0C4DH26 115 aa20.99■□□□□ 0.95
SF1-212ENST00000463343 EEF2P13639 858 aaKnown RBP20.99■□□□□ 0.95
SF1-212ENST00000463343 FLT3LGP49771 235 aa20.99■□□□□ 0.95
SF1-212ENST00000463343 USP14P54578 494 aa20.99■□□□□ 0.95
SF1-212ENST00000463343 ICA1Q05084 483 aa20.99■□□□□ 0.95
SF1-212ENST00000463343 ZYXQ15942 572 aaKnown RBP20.99■□□□□ 0.95
SF1-212ENST00000463343 TBC1D10CQ8IV04 446 aa20.99■□□□□ 0.95
SF1-212ENST00000463343 C12orf42Q96LP6 360 aa20.99■□□□□ 0.95
SF1-212ENST00000463343 FEZ1Q99689 392 aa20.99■□□□□ 0.95
SF1-212ENST00000463343 TMX2Q9Y320 296 aa20.99■□□□□ 0.95
SF1-212ENST00000463343 NR2E3Q9Y5X4 410 aa20.99■□□□□ 0.95
SF1-212ENST00000463343 RANBP2P49792 3224 aaKnown RBP20.98■□□□□ 0.95
SF1-212ENST00000463343 CDC45O75419 566 aa20.98■□□□□ 0.95
SF1-212ENST00000463343 AKNAD1Q5T1N1 836 aa20.98■□□□□ 0.95
SF1-212ENST00000463343 SMCR8Q8TEV9 937 aaPredicted RBP20.98■□□□□ 0.95
SF1-212ENST00000463343 PNMA3Q9UL41 463 aa20.98■□□□□ 0.95
SF1-212ENST00000463343 DOCK3Q8IZD9 2030 aa20.98■□□□□ 0.95
SF1-212ENST00000463343 MYH8P13535 1937 aa20.98■□□□□ 0.95
SF1-212ENST00000463343 TNPO2O14787 897 aaKnown RBP20.97■□□□□ 0.95
SF1-212ENST00000463343 RANBP6O60518 1105 aaKnown RBP20.97■□□□□ 0.95
SF1-212ENST00000463343 TSPY3P0CV98 308 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 TSPY8P0CW00 308 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 HOXA7P31268 230 aaPredicted RBP20.97■□□□□ 0.95
SF1-212ENST00000463343 ATP2B2Q01814 1243 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 KIAA1755Q5JYT7 1200 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 MFSD6Q6ZSS7 791 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 STAG1Q8WVM7 1258 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 MAP4K1Q92918 833 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 UNC93B1Q9H1C4 597 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 PRO3102Q9H379 93 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 ARHGEF10LQ9HCE6 1279 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 NYAP2Q9P242 653 aa20.97■□□□□ 0.95
SF1-212ENST00000463343 GCLCP48506 637 aaPredicted RBP20.96■□□□□ 0.95
SF1-212ENST00000463343 PABPC4Q13310 644 aaKnown RBP eCLIP20.96■□□□□ 0.95
SF1-212ENST00000463343 IMMTQ16891 758 aaKnown RBP20.96■□□□□ 0.95
SF1-212ENST00000463343 FAM110CQ1W6H9 321 aa20.96■□□□□ 0.95
SF1-212ENST00000463343 RRP12Q5JTH9 1297 aaKnown RBP20.96■□□□□ 0.95
SF1-212ENST00000463343 CHRDL2Q6WN34 429 aa20.96■□□□□ 0.95
SF1-212ENST00000463343 KIAA1211Q6ZU35 1233 aa20.96■□□□□ 0.95
SF1-212ENST00000463343 COA7Q96BR5 231 aa20.96■□□□□ 0.95
SF1-212ENST00000463343 CEP95Q96GE4 821 aa20.96■□□□□ 0.95
SF1-212ENST00000463343 LSG1Q9H089 658 aaKnown RBP20.96■□□□□ 0.95
SF1-212ENST00000463343 ASCC2Q9H1I8 757 aaPredicted RBP20.96■□□□□ 0.95
SF1-212ENST00000463343 TOMM22Q9NS69 142 aa20.96■□□□□ 0.95
SF1-212ENST00000463343 MTMR4Q9NYA4 1195 aa20.96■□□□□ 0.95
SF1-212ENST00000463343 U3KPZ7 1027 aaPredicted RBP20.96■□□□□ 0.95
SF1-212ENST00000463343 FARP2O94887 1054 aaPredicted RBP20.95■□□□□ 0.94
SF1-212ENST00000463343 PCP11498 1178 aaKnown RBP20.95■□□□□ 0.94
SF1-212ENST00000463343 P2RX7Q99572 595 aaKnown RBP20.95■□□□□ 0.94
SF1-212ENST00000463343 RNF41Q9H4P4 317 aaPredicted RBP20.95■□□□□ 0.94
SF1-212ENST00000463343 PAK6Q9NQU5 681 aaPredicted RBP20.95■□□□□ 0.94
SF1-212ENST00000463343 IL17RBQ9NRM6 502 aa20.95■□□□□ 0.94
SF1-212ENST00000463343 CLIP2Q9UDT6 1046 aa20.95■□□□□ 0.94
SF1-212ENST00000463343 TSPY2A6NKD2 308 aa20.94■□□□□ 0.94
SF1-212ENST00000463343 INHAP05111 366 aa20.94■□□□□ 0.94
SF1-212ENST00000463343 VCAM1P19320 739 aa20.94■□□□□ 0.94
SF1-212ENST00000463343 MKL1Q969V6 931 aa20.94■□□□□ 0.94
SF1-212ENST00000463343 CRISPLD2Q9H0B8 497 aa20.94■□□□□ 0.94
SF1-212ENST00000463343 SH2D4AQ9H788 454 aa20.94■□□□□ 0.94
SF1-212ENST00000463343 VCPKMTQ9H867 229 aa20.94■□□□□ 0.94
SF1-212ENST00000463343 RBM27Q9P2N5 1060 aaKnown RBP20.94■□□□□ 0.94
SF1-212ENST00000463343 PLIN4Q96Q06 1357 aa20.94■□□□□ 0.94
SF1-212ENST00000463343 LOC285556D6RIA3 1793 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 A0A1W2PPC1 479 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 USP17L15C9J2P7 530 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms