RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 VCAM1P19320 739 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 GUCY1A2P33402 732 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 SHMT1P34896 483 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 RGS2P41220 211 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 ZYXQ15942 572 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 LBX2Q6XYB7 198 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 Q7L0L9 218 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 TRMT44Q8IYL2 757 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 TDHQ8IZJ6 230 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 MAGEB6Q8N7X4 407 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 KIF1BPQ96EK5 621 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 RIOK1Q9BRS2 568 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 TRIM34Q9BYJ4 488 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 BTBD7Q9P203 1132 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 SERPINB13Q9UIV8 391 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 RABGAP1Q9Y3P9 1069 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 MCM3APO60318 1980 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 REV3LO60673 3130 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 CHD7Q9P2D1 2997 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 SPDYE16A6NNV3 312 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 APBB1O00213 710 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 RAB11FIP3O75154 756 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 MAP2K5Q13163 448 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 GRB14Q14449 540 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 HSP90AB4PQ58FF6 505 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 CATSPERGQ6ZRH7 1159 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 AACSQ86V21 672 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 SLC17A8Q8NDX2 589 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 KIAA1683Q9H0B3 1180 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 MYH4Q9Y623 1939 aa9.62□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 HOXC6P09630 235 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 PTPREP23469 700 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP5P45974 858 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 PLCD1P51178 756 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 GABPAQ06546 454 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 RAB3GAP1Q15042 981 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 ABCB5Q2M3G0 1257 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 CERS3Q8IU89 383 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 DEFB123Q8N688 67 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 TRPV1Q8NER1 839 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 NPLOC4Q8TAT6 608 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 MS4A3Q96HJ5 214 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 FEZ1Q99689 392 aa9.61□□□□□ -0.87
CDC42BPA-210ENST00000462553 A0A1W2PRG0 241 aa9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 SLC15A5A6NIM6 579 aa9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 DLL1O00548 723 aa9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 ATMINO43313 823 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 SMARCA5O60264 1052 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 CYBAP13498 195 aa9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP14P54578 494 aa9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 SEPT2Q15019 361 aa9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 CERKLQ49MI3 558 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 KIAA1755Q5JYT7 1200 aa9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 EDC3Q96F86 508 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 UBE2OQ9C0C9 1292 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 RPAP3Q9H6T3 665 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 DCTPP1Q9H773 170 aa9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 MTMR10Q9NXD2 777 aa9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 DDX20Q9UHI6 824 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-210ENST00000462553 TCRBV5S4A2TA0A5A2 114 aa9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 PDE6AP16499 860 aa9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 CYP2C19P33261 490 aa9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 CCNA1P78396 465 aa9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 MDM2Q00987 491 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 MAP3K12Q12852 859 aa9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 TMED8Q6PL24 325 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 TTC6Q86TZ1 520 aa9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 CCAR1Q8IX12 1150 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 CLASRPQ8N2M8 674 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 SCUBE2Q9NQ36 999 aa9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 STXBP5LQ9Y2K9 1186 aa9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 TRANK1O15050 2925 aa9.59□□□□□ -0.87
CDC42BPA-210ENST00000462553 MYO9BQ13459 2157 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 GLRX3O76003 335 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 CYP2D6P10635 497 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 WDR78Q5VTH9 848 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 MFSD14CQ5VZR4 134 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 CLEC10AQ8IUN9 316 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 LCORLQ8N3X6 602 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 SLC44A5Q8NCS7 719 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 LPAR1Q92633 364 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 GUCD1Q96NT3 240 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 MOV10L1Q9BXT6 1211 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 LRRCC1Q9C099 1032 aa9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 SUPT16HQ9Y5B9 1047 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-210ENST00000462553 ZNF532Q9HCE3 1301 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 MAGEB6P1A0A0J9YX57 407 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 SMIM22K7EJ46 135 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 DNM1LO00429 736 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 IFIT2P09913 472 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms