RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CEP131Q9UPN4 1083 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 XDHP47989 1333 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 PLEKHA8P1O95397 391 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 UQCRFS1P1P0C7P4 283 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 USP5P45974 858 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 MAP3K12Q12852 859 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 PUM3Q15397 648 aaKnown RBP13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 HDXQ7Z353 690 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 C10orf67Q8IYJ2 551 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 HNRNPLLQ8WVV9 542 aaKnown RBP13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 ABHD10Q9NUJ1 306 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 TMOD3Q9NYL9 352 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 LTBP4Q8N2S1 1624 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 ERICH2A1L162 156 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 MINDY4BA8MYZ0 360 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 ADGRA1Q86SQ6 560 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 LPIN2Q92539 896 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 IQSEC3Q9UPP2 1182 aaPredicted RBP13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 MAPK8IP1Q9UQF2 711 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 SLIT2O94813 1529 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 TNKSO95271 1327 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 ADAMTS3O15072 1205 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 IL2RBP14784 551 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 CHP1Q99653 195 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 NAPGQ99747 312 aaPredicted RBP13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 LRRIQ3A6PVS8 624 aaPredicted RBP13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 MYO1CO00159 1063 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 BCAMP50895 628 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 CASP8Q14790 479 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 CNGA4Q8IV77 575 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 GOLGA5Q8TBA6 731 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 PIGBQ92521 554 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 NUP88Q99567 741 aaPredicted RBP13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 MTRQ99707 1265 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 PSD3Q9NYI0 1048 aa13.29□□□□□ -0.28
PDZRN3-203ENST00000462146 COL5A2P05997 1499 aaPredicted RBP13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 CYP2D7A0A087X1C5 515 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 N4BP3O15049 544 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 ACTN2P35609 894 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 KRT2P35908 639 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 FILIP1LQ4L180 1135 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 PHF20Q9BVI0 1012 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 PLCH1Q4KWH8 1693 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 ITGB4P16144 1822 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 ENC1O14682 589 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 PPARAQ07869 468 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 SEC23AQ15436 765 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 RRAGBQ5VZM2 374 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 CTAGE1Q96RT6 745 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 UBAC1Q9BSL1 405 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 TTF2Q9UNY4 1162 aaKnown RBP13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 REXO2Q9Y3B8 237 aaKnown RBP13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 NHSL1Q5SYE7 1610 aa13.28□□□□□ -0.28
PDZRN3-203ENST00000462146 LRP5O75197 1615 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 CTAGE15A4D2H0 777 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 CTAGE8P0CG41 777 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 FECHP22830 423 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 SLC20A2Q08357 652 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 CTAGE6Q86UF2 777 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 CTAGE4Q8IX94 777 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 CCDC102AQ96A19 550 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 GSDMAQ96QA5 445 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 ZBTB1Q9Y2K1 713 aa13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 V9GY48 417 aaPredicted RBP13.27□□□□□ -0.28
PDZRN3-203ENST00000462146 CCDC196A0A1B0GTZ2 297 aa13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 PDE8AO60658 829 aa13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 COPB1P53618 953 aaKnown RBP13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 AMPD2Q01433 879 aa13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 EVX2Q03828 476 aa13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 PTGDRQ13258 359 aa13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 SLC4A9Q96Q91 983 aa13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 RNF26Q9BY78 433 aaPredicted RBP13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 PLEKHA4Q9H4M7 779 aa13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 GUCA1BQ9UMX6 200 aa13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 GDAQ9Y2T3 454 aa13.27□□□□□ -0.29
PDZRN3-203ENST00000462146 ERLIN1O75477 346 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 DCCP43146 1447 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 FUT2Q10981 343 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 NPY5RQ15761 445 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 SRLQ86TD4 932 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 ENAHQ8N8S7 591 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 ITIH6Q6UXX5 1313 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 TRIM49BA6NDI0 452 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 SRGAP2O75044 1071 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 SLC5A1P13866 664 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 KRT9P35527 623 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 E2F4Q16254 413 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 IL17AQ16552 155 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 TMTC1Q8IUR5 882 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 NACAP1Q9BZK3 213 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 MYO6Q9UM54 1294 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 RRP15Q9Y3B9 282 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 TTC38Q5R3I4 469 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms