RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
FN1-214ENST00000460217 CLIP2Q9UDT6 1046 aa12.54□□□□□ -0.4
FN1-214ENST00000460217 BRPF3Q9ULD4 1205 aa12.54□□□□□ -0.4
FN1-214ENST00000460217 TPCN1Q9ULQ1 816 aa12.54□□□□□ -0.4
FN1-214ENST00000460217 KLF18A0A0U1RQI7 1052 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 A0A1W2PRG0 241 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 ZBTB43O43298 467 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 PDIA3P30101 505 aaKnown RBP12.53□□□□□ -0.4
FN1-214ENST00000460217 ANP32AP39687 249 aaKnown RBP12.53□□□□□ -0.4
FN1-214ENST00000460217 PPATQ06203 517 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 PPP2R5BQ15173 497 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 LRRC47Q8N1G4 583 aaKnown RBP12.53□□□□□ -0.4
FN1-214ENST00000460217 ZNF280CQ8ND82 737 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 ACER1Q8TDN7 264 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 CLMNQ96JQ2 1002 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.53□□□□□ -0.4
FN1-214ENST00000460217 AFG3L2Q9Y4W6 797 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 ZHX2Q9Y6X8 837 aa12.53□□□□□ -0.4
FN1-214ENST00000460217 BAZ2BQ9UIF8 2168 aaKnown RBP12.52□□□□□ -0.4
FN1-214ENST00000460217 GOLGA8BA8MQT2 603 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 C19orf81C9J6K1 198 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.41
FN1-214ENST00000460217 PFKFB2O60825 505 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 SNHG28P0DPA3 235 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 ECE1P42892 770 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 USP14P54578 494 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 BACE1P56817 501 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 ATP2B2Q01814 1243 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 PPIL2Q13356 520 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 ME3Q16798 604 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 SAPCD2Q86UD0 394 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 HSCBQ8IWL3 235 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 LPAR1Q92633 364 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 CHMP4CQ96CF2 233 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 TMX3Q96JJ7 454 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 VCPKMTQ9H867 229 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 ELP3Q9H9T3 547 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 KCNH4Q9UQ05 1017 aa12.52□□□□□ -0.41
FN1-214ENST00000460217 LOC285556D6RIA3 1793 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 CCDC196A0A1B0GTZ2 297 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 TMEM88BA6NKF7 163 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 USP17L10C9JJH3 530 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 F5H6K3 240 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 CXCL11O14625 94 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 NDUFB10O96000 172 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 PDHBP11177 359 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 HUNKP57058 714 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 KLRC3Q07444 240 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 SPP2Q13103 211 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 BECN1Q14457 450 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 GRM4Q14833 912 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 SH3D19Q5HYK7 790 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 CCDC84Q86UT8 332 aaPredicted RBP12.51□□□□□ -0.41
FN1-214ENST00000460217 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 FANCBQ8NB91 859 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 DCAF4Q8WV16 495 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 SLC10A4Q96EP9 437 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 GMCL1Q96IK5 515 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 HHIPL1Q96JK4 782 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 C12orf42Q96LP6 360 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 FEZ1Q99689 392 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 LARP6Q9BRS8 491 aaKnown RBP12.51□□□□□ -0.41
FN1-214ENST00000460217 SLKQ9H2G2 1235 aaPredicted RBP12.51□□□□□ -0.41
FN1-214ENST00000460217 TLL2Q9Y6L7 1015 aa12.51□□□□□ -0.41
FN1-214ENST00000460217 TRIM75PA6NK02 468 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 DHX16O60231 1041 aaKnown RBP12.5□□□□□ -0.41
FN1-214ENST00000460217 LARGE1O95461 756 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 KIF5BP33176 963 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 METAP2P50579 478 aaKnown RBP eCLIP12.5□□□□□ -0.41
FN1-214ENST00000460217 MTMR2Q13614 643 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 RTN1Q16799 776 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 SLFN13Q68D06 897 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 NOL8Q76FK4 1167 aaKnown RBP12.5□□□□□ -0.41
FN1-214ENST00000460217 CTCFLQ8NI51 663 aaPredicted RBP12.5□□□□□ -0.41
FN1-214ENST00000460217 NUP133Q8WUM0 1156 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 GTF3C6Q969F1 213 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 OPTNQ96CV9 577 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 MYL10Q9BUA6 226 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
FN1-214ENST00000460217 MYH6P13533 1939 aa12.5□□□□□ -0.41
FN1-214ENST00000460217 PARP14Q460N5 1801 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 PALM3A6NDB9 673 aaPredicted RBP12.49□□□□□ -0.41
FN1-214ENST00000460217 GOLGA8AA7E2F4 631 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 IRF6O14896 467 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 PARP1P09874 1014 aaKnown RBP12.49□□□□□ -0.41
FN1-214ENST00000460217 ZBTB48P10074 688 aaPredicted RBP12.49□□□□□ -0.41
FN1-214ENST00000460217 SLC1A4P43007 532 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 GNAQP50148 359 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 SCRN1Q12765 414 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 CUL4AQ13619 759 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 GPATCH4Q5T3I0 446 aaKnown RBP12.49□□□□□ -0.41
FN1-214ENST00000460217 USP17L2Q6R6M4 530 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
FN1-214ENST00000460217 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms