RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 USP17L24Q0WX57 530 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 FAM110CQ1W6H9 321 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 KIAA1755Q5JYT7 1200 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 TRIM47Q96LD4 638 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 IL25Q9H293 177 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 RPAP3Q9H6T3 665 aaPredicted RBP17.39■□□□□ 0.37
VPS16-205ENST00000453689 SH2D4AQ9H788 454 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 INCENPQ9NQS7 918 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 PTPN22Q9Y2R2 807 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 TACC3Q9Y6A5 838 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
VPS16-205ENST00000453689 SGSM2O43147 1006 aa17.38■□□□□ 0.37
VPS16-205ENST00000453689 FAM47AQ5JRC9 791 aa17.38■□□□□ 0.37
VPS16-205ENST00000453689 CATSPERGQ6ZRH7 1159 aa17.38■□□□□ 0.37
VPS16-205ENST00000453689 VCPKMTQ9H867 229 aa17.38■□□□□ 0.37
VPS16-205ENST00000453689 HPS5Q9UPZ3 1129 aa17.38■□□□□ 0.37
VPS16-205ENST00000453689 FMNL1O95466 1100 aaPredicted RBP17.37■□□□□ 0.37
VPS16-205ENST00000453689 GNRH1P01148 92 aa17.37■□□□□ 0.37
VPS16-205ENST00000453689 HAND2P61296 217 aa17.37■□□□□ 0.37
VPS16-205ENST00000453689 NEDD1Q8NHV4 660 aa17.37■□□□□ 0.37
VPS16-205ENST00000453689 LPAR1Q92633 364 aa17.37■□□□□ 0.37
VPS16-205ENST00000453689 CEP95Q96GE4 821 aa17.37■□□□□ 0.37
VPS16-205ENST00000453689 ESYT1Q9BSJ8 1104 aa17.37■□□□□ 0.37
VPS16-205ENST00000453689 NYAP2Q9P242 653 aa17.37■□□□□ 0.37
VPS16-205ENST00000453689 MORF4L1Q9UBU8 362 aa17.37■□□□□ 0.37
VPS16-205ENST00000453689 CCDC85CA6NKD9 419 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 PEX10O60683 326 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 FGRP09769 529 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 TSPY3P0CV98 308 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 TSPY8P0CW00 308 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 FCGRTP55899 365 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 TFAP4Q01664 338 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 POTEEQ6S8J3 1075 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 SPICE1Q8N0Z3 855 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 DSCC1Q9BVC3 393 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 NBPF3Q9H094 633 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 TXNRD2Q9NNW7 524 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 HTTP42858 3142 aa17.36■□□□□ 0.37
VPS16-205ENST00000453689 WDR46O15213 610 aaKnown RBP17.35■□□□□ 0.37
VPS16-205ENST00000453689 ORC4O43929 436 aa17.35■□□□□ 0.37
VPS16-205ENST00000453689 GTF3C2Q8WUA4 911 aaPredicted RBP17.35■□□□□ 0.37
VPS16-205ENST00000453689 TANGO6Q9C0B7 1094 aa17.35■□□□□ 0.37
VPS16-205ENST00000453689 GOPCQ9HD26 462 aa17.35■□□□□ 0.37
VPS16-205ENST00000453689 MTMR4Q9NYA4 1195 aa17.35■□□□□ 0.37
VPS16-205ENST00000453689 RBPJLQ9UBG7 517 aa17.35■□□□□ 0.37
VPS16-205ENST00000453689 CLIP2Q9UDT6 1046 aa17.35■□□□□ 0.37
VPS16-205ENST00000453689 SRRDQ9UH36 339 aa17.35■□□□□ 0.37
VPS16-205ENST00000453689 PTCH2Q9Y6C5 1203 aa17.35■□□□□ 0.37
VPS16-205ENST00000453689 TSPY2A6NKD2 308 aa17.34■□□□□ 0.37
VPS16-205ENST00000453689 SPDYE16A6NNV3 312 aaPredicted RBP17.34■□□□□ 0.37
VPS16-205ENST00000453689 RANBP6O60518 1105 aaKnown RBP17.34■□□□□ 0.37
VPS16-205ENST00000453689 HOXD10P28358 340 aa17.34■□□□□ 0.37
VPS16-205ENST00000453689 PRMT2P55345 433 aa17.34■□□□□ 0.37
VPS16-205ENST00000453689 TBC1D10CQ8IV04 446 aa17.34■□□□□ 0.37
VPS16-205ENST00000453689 PAGR1Q9BTK6 254 aa17.34■□□□□ 0.37
VPS16-205ENST00000453689 PLXNA1Q9UIW2 1896 aa17.33■□□□□ 0.37
VPS16-205ENST00000453689 MYPNQ86TC9 1320 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 ZNF213O14771 459 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 TNPO2O14787 897 aaKnown RBP17.33■□□□□ 0.36
VPS16-205ENST00000453689 RAD21O60216 631 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 TTLL1O95922 423 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 ERVK-9P63128 1117 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 ERVK-24P63145 666 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 COG2Q14746 738 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 RRP12Q5JTH9 1297 aaKnown RBP17.33■□□□□ 0.36
VPS16-205ENST00000453689 AKNAD1Q5T1N1 836 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 LBX2Q6XYB7 198 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 GPRC5AQ8NFJ5 357 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 STAG1Q8WVM7 1258 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 MKL1Q969V6 931 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 GABRQQ9UN88 632 aa17.33■□□□□ 0.36
VPS16-205ENST00000453689 CENPFP49454 3210 aa17.32■□□□□ 0.36
VPS16-205ENST00000453689 CNMDO75829 334 aa17.32■□□□□ 0.36
VPS16-205ENST00000453689 PCP11498 1178 aaKnown RBP17.32■□□□□ 0.36
VPS16-205ENST00000453689 PRKCZQ05513 592 aa17.32■□□□□ 0.36
VPS16-205ENST00000453689 Q3C1V9 767 aa17.32■□□□□ 0.36
VPS16-205ENST00000453689 KIAA1211Q6ZU35 1233 aa17.32■□□□□ 0.36
VPS16-205ENST00000453689 LRRC47Q8N1G4 583 aaKnown RBP17.32■□□□□ 0.36
VPS16-205ENST00000453689 IL17RBQ9NRM6 502 aa17.32■□□□□ 0.36
VPS16-205ENST00000453689 BTBD7Q9P203 1132 aa17.32■□□□□ 0.36
VPS16-205ENST00000453689 RABGAP1Q9Y3P9 1069 aa17.32■□□□□ 0.36
VPS16-205ENST00000453689 NEDD4P46934 1319 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 F5H6K3 240 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 NMT2O60551 498 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 FLOT1O75955 427 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 NDUFB10O96000 172 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 PTH1RQ03431 593 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 KLRC3Q07444 240 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 FAM83BQ5T0W9 1011 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 MFSD6Q6ZSS7 791 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 NUP88Q99567 741 aaPredicted RBP17.31■□□□□ 0.36
VPS16-205ENST00000453689 RNF41Q9H4P4 317 aaPredicted RBP17.31■□□□□ 0.36
VPS16-205ENST00000453689 HOXC10Q9NYD6 342 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 CTNNA3Q9UI47 895 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 SYNPO2Q9UMS6 1093 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 MYH6P13533 1939 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 ZNF236Q9UL36 1845 aa17.31■□□□□ 0.36
VPS16-205ENST00000453689 DSG3P32926 999 aa17.3■□□□□ 0.36
VPS16-205ENST00000453689 IMMTQ16891 758 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms