RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 C6orf15Q6UXA7 325 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 FAM178BQ8IXR5 827 aa7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 SHKBP1Q8TBC3 707 aa7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 RNF141Q8WVD5 230 aa7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 MKL1Q969V6 931 aa7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 OSBPL2Q9H1P3 480 aa7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 ATG3Q9NT62 314 aa7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 CDK11AQ9UQ88 783 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 C9IYK1 514 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 GJB6O95452 261 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 TP53P04637 393 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 NCAPHQ15003 741 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 SFRP5Q5T4F7 317 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 KIAA1211LQ6NV74 962 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 PPFIBP1Q86W92 1011 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 KLHL6Q8WZ60 621 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 COX4I2Q96KJ9 171 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 ZNF512BQ96KM6 892 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 OSBPL1AQ9BXW6 950 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 ZSWIM4Q9H7M6 989 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 MAPK8IP1Q9UQF2 711 aa7.55□□□□□ -1.2
HMGB1P26-201ENST00000452520 K7ELQ4 463 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P26-201ENST00000452520 LRRN2O75325 713 aa7.54□□□□□ -1.2
HMGB1P26-201ENST00000452520 FURINP09958 794 aa7.54□□□□□ -1.2
HMGB1P26-201ENST00000452520 RNF4P78317 190 aa7.54□□□□□ -1.2
HMGB1P26-201ENST00000452520 AXDND1Q5T1B0 1012 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P26-201ENST00000452520 METTL22Q9BUU2 404 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P26-201ENST00000452520 ASPNQ9BXN1 380 aa7.54□□□□□ -1.2
HMGB1P26-201ENST00000452520 CCDC113Q9H0I3 377 aa7.54□□□□□ -1.2
HMGB1P26-201ENST00000452520 MSRB2Q9Y3D2 182 aa7.54□□□□□ -1.2
HMGB1P26-201ENST00000452520 B2RBV5 119 aa7.53□□□□□ -1.2
HMGB1P26-201ENST00000452520 CBX7O95931 251 aa7.53□□□□□ -1.2
HMGB1P26-201ENST00000452520 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
HMGB1P26-201ENST00000452520 TDRD10Q5VZ19 366 aaKnown RBP7.53□□□□□ -1.2
HMGB1P26-201ENST00000452520 LRP10Q7Z4F1 713 aa7.53□□□□□ -1.2
HMGB1P26-201ENST00000452520 ZDHHC13Q8IUH4 622 aa7.53□□□□□ -1.2
HMGB1P26-201ENST00000452520 CCDC144CPQ8IYA2 1237 aa7.53□□□□□ -1.2
HMGB1P26-201ENST00000452520 SMARCC1Q92922 1105 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P26-201ENST00000452520 FAM86C1Q9NVL1 165 aa7.53□□□□□ -1.2
HMGB1P26-201ENST00000452520 PRR33A8MZF0 331 aa7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 KIR3DL1P43629 444 aa7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 AUHQ13825 339 aaKnown RBP7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 BMS1Q14692 1282 aaKnown RBP7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 NFE2L2Q16236 605 aa7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 CPSF6Q16630 551 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 NBPF9Q3BBW0 867 aa7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 MRM1Q6IN84 353 aaKnown RBP7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 C22orf34Q6ZV56 151 aa7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 C7orf61Q8IZ16 206 aa7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 Q96M66 194 aa7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 MKRN2Q9H000 416 aaKnown RBP7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 PIF1Q9H611 641 aa7.52□□□□□ -1.21
HMGB1P26-201ENST00000452520 FAM221BA6H8Z2 402 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 PRR19A6NJB7 356 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 CCDC85CA6NKD9 419 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 ZNF865P0CJ78 1059 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 OXCT1P55809 520 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 DCAF15Q66K64 600 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 SRPK1Q96SB4 655 aaKnown RBP7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 SEMA6BQ9H3T3 888 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 MKNK2Q9HBH9 465 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 LRRC4CQ9HCJ2 640 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 KCNH3Q9ULD8 1083 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 LEMD3Q9Y2U8 911 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 CAPN6Q9Y6Q1 641 aa7.51□□□□□ -1.21
HMGB1P26-201ENST00000452520 GNAT3A8MTJ3 354 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 PDPK1O15530 556 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 RASA3Q14644 834 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 PRSS36Q5K4E3 855 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 HEATR6Q6AI08 1181 aaKnown RBP7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 FAM181AQ8N9Y4 354 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 DTWD2Q8NBA8 298 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 DEPDC7Q96QD5 511 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 HAUS7Q99871 368 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 SNTG2Q9NY99 539 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 PIM2Q9P1W9 311 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 SUSD2Q9UGT4 822 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 ZNF451Q9Y4E5 1061 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 U3KQE9 123 aa7.5□□□□□ -1.21
HMGB1P26-201ENST00000452520 ANKRD34BA5PLL1 514 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 SHOXO15266 292 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 CYP26A1O43174 497 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 CBFA2T2O43439 604 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 CD247P20963 164 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 TNK2Q07912 1038 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 RASGRF1Q13972 1273 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 TCEAL1Q15170 157 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 ARHGAP27Q6ZUM4 889 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 EEPD1Q7L9B9 569 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 NOP9Q86U38 636 aaKnown RBP7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 MFSD4AQ8N468 514 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 PIWIL2Q8TC59 973 aaKnown RBP7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 MRFAP1L1Q96HT8 127 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 APBA2Q99767 749 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 PRDM14Q9GZV8 571 aa7.49□□□□□ -1.21
HMGB1P26-201ENST00000452520 FAM155AB1AL88 458 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P26-201ENST00000452520 EPHX1P07099 455 aa7.48□□□□□ -1.21
HMGB1P26-201ENST00000452520 ZNF143P52747 638 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P26-201ENST00000452520 SNW1Q13573 536 aaKnown RBP7.48□□□□□ -1.21
HMGB1P26-201ENST00000452520 NKPD1Q17RQ9 610 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms