RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 RCAN1P53805 252 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 SPP2Q13103 211 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 PPIL2Q13356 520 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 APOA5Q6Q788 366 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 SAPCD2Q86UD0 394 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 OPTNQ96CV9 577 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 ZNF274Q96GC6 653 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-210ENST00000449116 FEZ1Q99689 392 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 NAP1L2Q9ULW6 460 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-210ENST00000449116 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
SHANK2-210ENST00000449116 TLL2Q9Y6L7 1015 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 TRIM75PA6NK02 468 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 GOLGA8BA8MQT2 603 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 ZBTB43O43298 467 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 CALM1P0DP23 149 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 CALM2P0DP24 149 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 CALM3P0DP25 149 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 PDIA3P30101 505 aaKnown RBP17.11■□□□□ 0.33
SHANK2-210ENST00000449116 USP14P54578 494 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 BACE1P56817 501 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 TROAPQ12815 778 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 MICU3Q86XE3 530 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 ZSCAN31Q96LW9 406 aaPredicted RBP17.11■□□□□ 0.33
SHANK2-210ENST00000449116 MYL10Q9BUA6 226 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 KIAA1683Q9H0B3 1180 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 GOPCQ9HD26 462 aa17.11■□□□□ 0.33
SHANK2-210ENST00000449116 PHIPQ8WWQ0 1821 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 MYH4Q9Y623 1939 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 C19orf81C9J6K1 198 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 F5H6K3 240 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 KLRC3Q07444 240 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 MTMR2Q13614 643 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 ME3Q16798 604 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 HSCBQ8IWL3 235 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 MAP3K14Q99558 947 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
SHANK2-210ENST00000449116 ABT1Q9ULW3 272 aaKnown RBP17.1■□□□□ 0.33
SHANK2-210ENST00000449116 CXCL11O14625 94 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 IRF6O14896 467 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 RAD21O60216 631 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 PFKFB2O60825 505 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 NDUFB10O96000 172 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 SNHG28P0DPA3 235 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 PDHBP11177 359 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 RXRAP19793 462 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
SHANK2-210ENST00000449116 METAP2P50579 478 aaKnown RBP eCLIP17.09■□□□□ 0.33
SHANK2-210ENST00000449116 APLP1P51693 650 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 ZYXQ15942 572 aaKnown RBP17.09■□□□□ 0.33
SHANK2-210ENST00000449116 RGMBQ6NW40 437 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 USP17L2Q6R6M4 530 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 RAB11FIP4Q86YS3 637 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 DCAF4Q8WV16 495 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 WNK4Q96J92 1243 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-210ENST00000449116 SH2B1Q9NRF2 756 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-210ENST00000449116 HPS5Q9UPZ3 1129 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 KCNH4Q9UQ05 1017 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 MTMR7Q9Y216 660 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 NID2Q14112 1375 aa17.09■□□□□ 0.33
SHANK2-210ENST00000449116 GOLGA8AA7E2F4 631 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-210ENST00000449116 LARGE1O95461 756 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 ZBTB48P10074 688 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-210ENST00000449116 GJA5P36382 358 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 SLC1A4P43007 532 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 ZNF157P51786 506 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-210ENST00000449116 C1QTNF8P60827 252 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 STK3Q13188 491 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 GRM4Q14833 912 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 PPP2R5BQ15173 497 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 SH3D19Q5HYK7 790 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 CCDC144CPQ8IYA2 1237 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 FANCBQ8NB91 859 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-210ENST00000449116 LPAR1Q92633 364 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 GMCL1Q96IK5 515 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 TMX3Q96JJ7 454 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 HHIPL1Q96JK4 782 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 C12orf42Q96LP6 360 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 EMILIN3Q9NT22 766 aa17.08■□□□□ 0.32
SHANK2-210ENST00000449116 A0A0G2JLL6 359 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-210ENST00000449116 PARP1P09874 1014 aaKnown RBP17.07■□□□□ 0.32
SHANK2-210ENST00000449116 KIF5BP33176 963 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 HMGCS2P54868 508 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
SHANK2-210ENST00000449116 BECN1Q14457 450 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 RTN1Q16799 776 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 KIAA1755Q5JYT7 1200 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 SPRYD7Q5W111 196 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 RASGRP2Q7LDG7 609 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 PRRT2Q7Z6L0 340 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-210ENST00000449116 RASAL3Q86YV0 1011 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 SPICE1Q8N0Z3 855 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 GTF3C6Q969F1 213 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms