RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 BZW2Q9Y6E2 419 aaKnown RBP11.98□□□□□ -0.49
LINC00342-202ENST00000448494 RICTORQ6R327 1708 aa11.98□□□□□ -0.49
LINC00342-202ENST00000448494 CEMIPQ8WUJ3 1361 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 CCDC166P0CW27 439 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 ZFXP17010 805 aaPredicted RBP11.97□□□□□ -0.49
LINC00342-202ENST00000448494 HSPA2P54652 639 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 GUCY1A3Q02108 690 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 NEXNQ0ZGT2 675 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 NNTQ13423 1086 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 INF2Q27J81 1249 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 GLE1Q53GS7 698 aaKnown RBP11.97□□□□□ -0.49
LINC00342-202ENST00000448494 ILDR2Q71H61 639 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 LMNTD2Q8IXW0 634 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 PDILTQ8N807 584 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 CCT6BQ92526 530 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 MRPS27Q92552 414 aaKnown RBP11.97□□□□□ -0.49
LINC00342-202ENST00000448494 PIDD1Q9HB75 910 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 CIDEBQ9UHD4 219 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 ITGB1BP2Q9UKP3 347 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 PTPRTO14522 1441 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 ARID3CA6NKF2 412 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 TMEM232C9JQI7 657 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 E7EVH7 732 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 SOCS7O14512 581 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 TMCC1O94876 653 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 HARSP12081 509 aaKnown RBP11.97□□□□□ -0.49
LINC00342-202ENST00000448494 KCNA4P22459 653 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 ATP1A2P50993 1020 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 CACNA2D3Q8IZS8 1091 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 SAMD3Q8N6K7 520 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 CCDC63Q8NA47 563 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 NAF1Q96HR8 494 aaKnown RBP11.97□□□□□ -0.49
LINC00342-202ENST00000448494 DHRS1Q96LJ7 313 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 MPHOSPH6Q99547 160 aaKnown RBP11.97□□□□□ -0.49
LINC00342-202ENST00000448494 CORO1BQ9BR76 489 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 PREBQ9HCU5 417 aa11.97□□□□□ -0.49
LINC00342-202ENST00000448494 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC00342-202ENST00000448494 BARX2Q9UMQ3 279 aaPredicted RBP11.97□□□□□ -0.49
LINC00342-202ENST00000448494 UNC13BO14795 1591 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 SBNO2Q9Y2G9 1366 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 A0A1W2PQ27 194 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 A0A1W2PQ64 194 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 A0A1W2PQD8 194 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 CPA1P15085 419 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 NR1D1P20393 614 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 ADD1P35611 737 aaKnown RBP11.96□□□□□ -0.49
LINC00342-202ENST00000448494 SEC24CP53992 1094 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 SAFB2Q14151 953 aaKnown RBP eCLIP11.96□□□□□ -0.491e-8■■■□□ 15
LINC00342-202ENST00000448494 PKN1Q16512 942 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 IFI16Q16666 785 aaKnown RBP11.96□□□□□ -0.49
LINC00342-202ENST00000448494 ANKRD20A2Q5SQ80 823 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 ANKRD20A1Q5TYW2 823 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 ANKRD20A3Q5VUR7 823 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 NCAPH2Q6IBW4 605 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 GALNT17Q6IS24 598 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 SND1Q7KZF4 910 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00342-202ENST00000448494 TRAPPC11Q7Z392 1133 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 IQCF2Q8IXL9 164 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 CNBD1Q8NA66 436 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 GDAP1L1Q96MZ0 367 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 POLR3CQ9BUI4 534 aaPredicted RBP11.96□□□□□ -0.49
LINC00342-202ENST00000448494 ALDH8A1Q9H2A2 487 aaPredicted RBP11.96□□□□□ -0.49
LINC00342-202ENST00000448494 PCDH18Q9HCL0 1135 aa11.96□□□□□ -0.49
LINC00342-202ENST00000448494 PAIP2BQ9ULR5 123 aaKnown RBP11.96□□□□□ -0.49
LINC00342-202ENST00000448494 GMNCA6NCL1 334 aa11.96□□□□□ -0.5
LINC00342-202ENST00000448494 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.5
LINC00342-202ENST00000448494 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.5
LINC00342-202ENST00000448494 SLC3A2P08195 630 aaKnown RBP11.96□□□□□ -0.5
LINC00342-202ENST00000448494 PHEXP78562 749 aa11.96□□□□□ -0.5
LINC00342-202ENST00000448494 ADAM9Q13443 819 aa11.96□□□□□ -0.5
LINC00342-202ENST00000448494 BTG3Q14201 252 aaPredicted RBP11.96□□□□□ -0.5
LINC00342-202ENST00000448494 TSHZ3Q63HK5 1081 aa11.96□□□□□ -0.5
LINC00342-202ENST00000448494 ZNF280DQ6N043 979 aa11.96□□□□□ -0.5
LINC00342-202ENST00000448494 ARFGAP2Q8N6H7 521 aa11.96□□□□□ -0.5
LINC00342-202ENST00000448494 ZBTB8BQ8NAP8 495 aaPredicted RBP11.96□□□□□ -0.5
LINC00342-202ENST00000448494 FAM167BQ9BTA0 163 aa11.96□□□□□ -0.5
LINC00342-202ENST00000448494 NACA2Q9H009 215 aa11.96□□□□□ -0.5
LINC00342-202ENST00000448494 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.5
LINC00342-202ENST00000448494 ABCC6O95255 1503 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 SPHKAPQ2M3C7 1700 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 MYH15Q9Y2K3 1946 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 IDO1P14902 403 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 PSMD7P51665 324 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 ADKP55263 362 aaKnown RBP11.95□□□□□ -0.5
LINC00342-202ENST00000448494 NLRP5P59047 1200 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 TAF11Q15544 211 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 EMBQ6PCB8 327 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 MYOCDQ8IZQ8 938 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 ATP11CQ8NB49 1132 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 DYDC1Q8WWB3 177 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 KIFAP3Q92845 792 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 SEC16BQ96JE7 1060 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 INTS13Q9NVM9 706 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 LEMD3Q9Y2U8 911 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 SIGLEC1Q9BZZ2 1709 aa11.95□□□□□ -0.5
LINC00342-202ENST00000448494 GOLGA6L10A0A0M3HER8 536 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 PRC1O43663 620 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 TFRCP02786 760 aaKnown RBP11.94□□□□□ -0.5
LINC00342-202ENST00000448494 IQCEQ6IPM2 695 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms