RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 IL17RAQ96F46 866 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 HHIPL1Q96JK4 782 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 NEK1Q96PY6 1258 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 KANSL2Q9H9L4 492 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 ELP3Q9H9T3 547 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 IL17RBQ9NRM6 502 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 MTMR4Q9NYA4 1195 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 ZBTB21Q9ULJ3 1066 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 ZHX2Q9Y6X8 837 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 SIPA1L1O43166 1804 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 SPDYE5A6NIY4 337 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 SNPHO15079 494 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 NMT2O60551 498 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 HMGB1P09429 215 aaKnown RBP8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 PSMA5P28066 241 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 MCM5P33992 734 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 NOVP48745 357 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 RBM25P49756 843 aaKnown RBP8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 ZNF157P51786 506 aaPredicted RBP8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 EXOSC10Q01780 885 aaKnown RBP8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 PPATQ06203 517 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 DEFB115Q30KQ5 88 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 RGMBQ6NW40 437 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 DHX32Q7L7V1 743 aaKnown RBP8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 CHST3Q7LGC8 479 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 CCDC84Q86UT8 332 aaPredicted RBP8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 MB21D2Q8IYB1 491 aaPredicted RBP8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 CCDC102AQ96A19 550 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 OPTNQ96CV9 577 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 CEP95Q96GE4 821 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 JAKMIP1Q96N16 626 aaKnown RBP8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 TTC14Q96N46 770 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 WDR18Q9BV38 432 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 TM6SF1Q9BZW5 370 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 CLIP2Q9UDT6 1046 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 AFG3L2Q9Y4W6 797 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 PAPPA2Q9BXP8 1791 aa8.89□□□□□ -0.99
AC004540.1-206ENST00000448056 A0A1W2PRG0 241 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 RASSF10A6NK89 507 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 IRF6O14896 467 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 PRC1O43663 620 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 TTLL1O95922 423 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 EEF2P13639 858 aaKnown RBP8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 GJA5P36382 358 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 ANTXR2P58335 489 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 ICA1Q05084 483 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 SPP2Q13103 211 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 PPIL2Q13356 520 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 CCDC178Q5BJE1 867 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 PPP4R3BQ5MIZ7 849 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 SPRYD7Q5W111 196 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 BLOC1S2Q6QNY1 142 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 IQCA1Q86XH1 822 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 DGKHQ86XP1 1220 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 ZNF280CQ8ND82 737 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 ACER1Q8TDN7 264 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 IGDCC4Q8TDY8 1250 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 ANKS1AQ92625 1134 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 MKL1Q969V6 931 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 WNK4Q96J92 1243 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 TBC1D32Q96NH3 1257 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 ZSCAN10Q96SZ4 725 aaPredicted RBP8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 KIF2CQ99661 725 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 ZKSCAN3Q9BRR0 538 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 UBAC1Q9BSL1 405 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 TBC1D2Q9BYX2 928 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 AS3MTQ9HBK9 375 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 NYAP2Q9P242 653 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 PCDHGA4Q9Y5G9 962 aa8.88□□□□□ -0.99
AC004540.1-206ENST00000448056 PLIN4Q96Q06 1357 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 TESPA1A2RU30 521 aaPredicted RBP8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 TRIM75PA6NK02 468 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 FAM155AB1AL88 458 aaPredicted RBP8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 C19orf81C9J6K1 198 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 USP17L10C9JJH3 530 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 CXCL11O14625 94 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 IFIT3O14879 490 aaKnown RBP8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 CPA1P15085 419 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 HSPA6P17066 643 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 CASTP20810 708 aaKnown RBP8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 RPS6KB1P23443 525 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 ECE1P42892 770 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 BACE1P56817 501 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 HTRA3P83110 453 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 ATP2B2Q01814 1243 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 RCSD1Q6JBY9 416 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 RUFY3Q7L099 469 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 RASAL3Q86YV0 1011 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 CLEC10AQ8IUN9 316 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 ENAHQ8N8S7 591 aaPredicted RBP8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 MTA3Q9BTC8 594 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 ARHGEF10LQ9HCE6 1279 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 STX8Q9UNK0 236 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 KCNH4Q9UQ05 1017 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 TMX2Q9Y320 296 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 CYP46A1Q9Y6A2 500 aa8.87□□□□□ -0.99
AC004540.1-206ENST00000448056 TRPM7Q96QT4 1865 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms