RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TTLL11Q8NHH1 800 aa18.61■□□□□ 0.57
TCOF1-206ENST00000445265 SPDYE3A6NKU9 549 aa18.61■□□□□ 0.57
TCOF1-206ENST00000445265 F8W031 263 aaPredicted RBP18.61■□□□□ 0.57
TCOF1-206ENST00000445265 NCBP1Q09161 790 aaKnown RBP18.61■□□□□ 0.57
TCOF1-206ENST00000445265 LONP1P36776 959 aaKnown RBP18.61■□□□□ 0.57
TCOF1-206ENST00000445265 LONRF3Q496Y0 759 aa18.61■□□□□ 0.57
TCOF1-206ENST00000445265 MB21D2Q8IYB1 491 aaPredicted RBP18.61■□□□□ 0.57
TCOF1-206ENST00000445265 SAR1BQ9Y6B6 198 aa18.61■□□□□ 0.57
TCOF1-206ENST00000445265 VWA3BQ502W6 1294 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 CFAP58Q5T655 872 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 GALNT17Q6IS24 598 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 SRPRBQ9Y5M8 271 aaKnown RBP18.6■□□□□ 0.57
TCOF1-206ENST00000445265 RPL13P26373 211 aaKnown RBP18.6■□□□□ 0.57
TCOF1-206ENST00000445265 EXOSC10Q01780 885 aaKnown RBP18.6■□□□□ 0.57
TCOF1-206ENST00000445265 CCDC144BQ3MJ40 725 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 ZC3H12CQ9C0D7 883 aaKnown RBP18.6■□□□□ 0.57
TCOF1-206ENST00000445265 PIH1D3Q9NQM4 214 aaKnown RBP18.6■□□□□ 0.57
TCOF1-206ENST00000445265 GNPATO15228 680 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 ATP1A3P13637 1013 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 MCAMP43121 646 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 STRBPQ96SI9 672 aaKnown RBP18.6■□□□□ 0.57
TCOF1-206ENST00000445265 SHPRHQ149N8 1683 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 ERVV-1B6SEH8 477 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 MAGEA1P43355 309 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 GLT8D2Q9H1C3 349 aa18.6■□□□□ 0.57
TCOF1-206ENST00000445265 ABCC12Q96J65 1359 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 UTYO14607 1347 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 MAP2K1Q02750 393 aaPredicted RBP18.59■□□□□ 0.57
TCOF1-206ENST00000445265 RESP18Q5W5W9 173 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 KCNB2Q92953 911 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 CDC23Q9UJX2 597 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 ITSN1Q15811 1721 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 C8orf74Q6P047 294 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 NR5A1Q13285 461 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 HS2ST1Q7LGA3 356 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 PNMA1Q8ND90 353 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 NOX5Q96PH1 765 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 PLVAPQ9BX97 442 aa18.59■□□□□ 0.57
TCOF1-206ENST00000445265 RPN1P04843 607 aaKnown RBP18.58■□□□□ 0.57
TCOF1-206ENST00000445265 KRT13P13646 458 aa18.58■□□□□ 0.57
TCOF1-206ENST00000445265 RAPGEF1Q13905 1077 aa18.58■□□□□ 0.57
TCOF1-206ENST00000445265 SLC9C1Q4G0N8 1177 aa18.58■□□□□ 0.57
TCOF1-206ENST00000445265 REXO1Q8N1G1 1221 aaKnown RBP18.58■□□□□ 0.57
TCOF1-206ENST00000445265 IFT81Q8WYA0 676 aa18.58■□□□□ 0.57
TCOF1-206ENST00000445265 GSTTP1A0A1W2PQM5 241 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 COPB1P53618 953 aaKnown RBP18.58■□□□□ 0.56
TCOF1-206ENST00000445265 FOXO4P98177 505 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 SRGAP1Q7Z6B7 1085 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 SNX29Q8TEQ0 813 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 ZBTB9Q96C00 473 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 ATP8A2Q9NTI2 1148 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 STK36Q9NRP7 1315 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 FMNL3Q8IVF7 1028 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 GJB4Q9NTQ9 266 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 MYO1AQ9UBC5 1043 aa18.58■□□□□ 0.56
TCOF1-206ENST00000445265 ZNF609O15014 1411 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 CASP14P31944 242 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 ADCY7P51828 1080 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 CNBD1Q8NA66 436 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 A6NNZ2 444 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 TUBB8Q3ZCM7 444 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 LCORLQ8N3X6 602 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 ATRIPQ8WXE1 791 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 RASSF4Q9H2L5 321 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 EPN1Q9Y6I3 576 aaPredicted RBP18.57■□□□□ 0.56
TCOF1-206ENST00000445265 CALCRLQ16602 461 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 NUCKS1Q9H1E3 243 aaKnown RBP18.57■□□□□ 0.56
TCOF1-206ENST00000445265 KCNF1Q9H3M0 494 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 SEMA3EO15041 775 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 CETN3O15182 167 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 RASAL2Q9UJF2 1139 aa18.57■□□□□ 0.56
TCOF1-206ENST00000445265 PRKAB2O43741 272 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 PTPREP23469 700 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 GBP2P32456 591 aaPredicted RBP18.56■□□□□ 0.56
TCOF1-206ENST00000445265 GOLGA8FQ08AF8 430 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 GOLGA8DPQ0D2H9 430 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 GPCPD1Q9NPB8 672 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 TSKSQ9UJT2 592 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 UFL1O94874 794 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 IFIH1Q9BYX4 1025 aaKnown RBP18.56■□□□□ 0.56
TCOF1-206ENST00000445265 FAM13AO94988 1023 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 IQCB1Q15051 598 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 HAUS3Q68CZ6 603 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 ATG9AQ7Z3C6 839 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 CCDC155Q8N6L0 562 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 PODXL2Q9NZ53 605 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 RASGRF1Q13972 1273 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 TBC1D10CQ8IV04 446 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 MAGEF1Q9HAY2 307 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 PCDHB6Q9Y5E3 794 aa18.56■□□□□ 0.56
TCOF1-206ENST00000445265 SMCO2A6NFE2 343 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 C10orf67Q8IYJ2 551 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 TRIM58Q8NG06 486 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 BBXQ8WY36 941 aaPredicted RBP18.55■□□□□ 0.56
TCOF1-206ENST00000445265 SAMM50Q9Y512 469 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 PRPF3O43395 683 aaKnown RBP18.55■□□□□ 0.56
TCOF1-206ENST00000445265 INF2Q27J81 1249 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 FBXO38Q6PIJ6 1188 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 DHX40Q8IX18 779 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms