RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 CAPN2P17655 700 aa21.97■■□□□ 1.11
GTF3A-204ENST00000438571 MAP2K5Q13163 448 aa21.97■■□□□ 1.11
GTF3A-204ENST00000438571 C11orf49Q9H6J7 331 aa21.97■■□□□ 1.11
GTF3A-204ENST00000438571 SMCHD1A6NHR9 2005 aa21.97■■□□□ 1.11
GTF3A-204ENST00000438571 SOX1O00570 391 aaPredicted RBP21.96■■□□□ 1.11
GTF3A-204ENST00000438571 AKR1B1P15121 316 aa21.96■■□□□ 1.11
GTF3A-204ENST00000438571 ATP5JP18859 108 aa21.96■■□□□ 1.11
GTF3A-204ENST00000438571 LBX2Q6XYB7 198 aa21.96■■□□□ 1.11
GTF3A-204ENST00000438571 NPLOC4Q8TAT6 608 aa21.96■■□□□ 1.11
GTF3A-204ENST00000438571 HAUS7Q99871 368 aa21.96■■□□□ 1.11
GTF3A-204ENST00000438571 NBPF3Q9H094 633 aa21.96■■□□□ 1.11
GTF3A-204ENST00000438571 CWC22Q9HCG8 908 aaKnown RBP21.96■■□□□ 1.11
GTF3A-204ENST00000438571 SYN1P17600 705 aa21.95■■□□□ 1.1
GTF3A-204ENST00000438571 PTPREP23469 700 aa21.95■■□□□ 1.1
GTF3A-204ENST00000438571 LHX8Q68G74 356 aa21.95■■□□□ 1.1
GTF3A-204ENST00000438571 LTBP2Q14767 1821 aa21.94■■□□□ 1.1
GTF3A-204ENST00000438571 SIAH1Q8IUQ4 282 aa21.94■■□□□ 1.1
GTF3A-204ENST00000438571 CCNA1P78396 465 aa21.93■■□□□ 1.1
GTF3A-204ENST00000438571 GRB14Q14449 540 aa21.93■■□□□ 1.1
GTF3A-204ENST00000438571 TMEM179Q6ZVK1 233 aa21.93■■□□□ 1.1
GTF3A-204ENST00000438571 TRMT44Q8IYL2 757 aaKnown RBP21.93■■□□□ 1.1
GTF3A-204ENST00000438571 TANGO6Q9C0B7 1094 aa21.93■■□□□ 1.1
GTF3A-204ENST00000438571 SLC15A5A6NIM6 579 aa21.92■■□□□ 1.1
GTF3A-204ENST00000438571 LRCH3Q96II8 777 aa21.92■■□□□ 1.1
GTF3A-204ENST00000438571 GDF15Q99988 308 aa21.92■■□□□ 1.1
GTF3A-204ENST00000438571 MOV10L1Q9BXT6 1211 aaKnown RBP21.92■■□□□ 1.1
GTF3A-204ENST00000438571 SWAP70Q9UH65 585 aa21.92■■□□□ 1.1
GTF3A-204ENST00000438571 DNAH12Q6ZR08 3092 aa21.91■■□□□ 1.1
GTF3A-204ENST00000438571 COL6A1P12109 1028 aa21.91■■□□□ 1.1
GTF3A-204ENST00000438571 SPICE1Q8N0Z3 855 aa21.91■■□□□ 1.1
GTF3A-204ENST00000438571 TRPV1Q8NER1 839 aa21.91■■□□□ 1.1
GTF3A-204ENST00000438571 PUS7LQ9H0K6 701 aaKnown RBP21.91■■□□□ 1.1
GTF3A-204ENST00000438571 MCM3APO60318 1980 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 USP17L12C9JPN9 530 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 USP17L21D6R901 530 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 CYP2C19P33261 490 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 CDK8P49336 464 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 ICA1Q05084 483 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 C12orf60Q5U649 245 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 TSHZ3Q63HK5 1081 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 LRRCC1Q9C099 1032 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 ATP8A2Q9NTI2 1148 aa21.9■■□□□ 1.1
GTF3A-204ENST00000438571 GLRX3O76003 335 aaKnown RBP21.89■■□□□ 1.09
GTF3A-204ENST00000438571 HOXC6P09630 235 aa21.89■■□□□ 1.09
GTF3A-204ENST00000438571 COG2Q14746 738 aa21.89■■□□□ 1.09
GTF3A-204ENST00000438571 UBE3CQ15386 1083 aa21.89■■□□□ 1.09
GTF3A-204ENST00000438571 LRRC26Q2I0M4 334 aa21.89■■□□□ 1.09
GTF3A-204ENST00000438571 ATG4CQ96DT6 458 aa21.89■■□□□ 1.09
GTF3A-204ENST00000438571 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.89■■□□□ 1.09
GTF3A-204ENST00000438571 SPATC1LQ9H0A9 340 aa21.89■■□□□ 1.09
GTF3A-204ENST00000438571 SLC4A4Q9Y6R1 1079 aa21.89■■□□□ 1.09
GTF3A-204ENST00000438571 IVNS1ABPQ9Y6Y0 642 aa21.89■■□□□ 1.09
GTF3A-204ENST00000438571 IGHA2P01877 340 aa21.88■■□□□ 1.09
GTF3A-204ENST00000438571 ERCC3P19447 782 aa21.88■■□□□ 1.09
GTF3A-204ENST00000438571 SAMD1Q6SPF0 538 aaPredicted RBP21.88■■□□□ 1.09
GTF3A-204ENST00000438571 C16orf86Q6ZW13 317 aa21.88■■□□□ 1.09
GTF3A-204ENST00000438571 VCPKMTQ9H867 229 aa21.88■■□□□ 1.09
GTF3A-204ENST00000438571 TMX2Q9Y320 296 aa21.88■■□□□ 1.09
GTF3A-204ENST00000438571 A0A1W2PPC1 479 aa21.87■■□□□ 1.09
GTF3A-204ENST00000438571 ADORA2AP29274 412 aa21.87■■□□□ 1.09
GTF3A-204ENST00000438571 DSG3P32926 999 aa21.87■■□□□ 1.09
GTF3A-204ENST00000438571 MAGEA10P43363 369 aaPredicted RBP21.87■■□□□ 1.09
GTF3A-204ENST00000438571 MFSD14CQ5VZR4 134 aa21.87■■□□□ 1.09
GTF3A-204ENST00000438571 CTR9Q6PD62 1173 aa21.87■■□□□ 1.09
GTF3A-204ENST00000438571 ARHGEF10LQ9HCE6 1279 aa21.87■■□□□ 1.09
GTF3A-204ENST00000438571 DDX20Q9UHI6 824 aaKnown RBP21.87■■□□□ 1.09
GTF3A-204ENST00000438571 COBLO75128 1261 aa21.86■■□□□ 1.09
GTF3A-204ENST00000438571 FLOT1O75955 427 aa21.86■■□□□ 1.09
GTF3A-204ENST00000438571 CYBAP13498 195 aa21.86■■□□□ 1.09
GTF3A-204ENST00000438571 CNGA1P29973 690 aa21.86■■□□□ 1.09
GTF3A-204ENST00000438571 ATP2B2Q01814 1243 aa21.86■■□□□ 1.09
GTF3A-204ENST00000438571 CHMP4BQ9H444 224 aaKnown RBP21.86■■□□□ 1.09
GTF3A-204ENST00000438571 FBXO28Q9NVF7 368 aa21.86■■□□□ 1.09
GTF3A-204ENST00000438571 EEF2P13639 858 aaKnown RBP21.85■■□□□ 1.09
GTF3A-204ENST00000438571 PLS1Q14651 629 aa21.85■■□□□ 1.09
GTF3A-204ENST00000438571 ANO1Q5XXA6 986 aa21.85■■□□□ 1.09
GTF3A-204ENST00000438571 STK11IPQ8N1F8 1099 aa21.85■■□□□ 1.09
GTF3A-204ENST00000438571 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.85■■□□□ 1.09
GTF3A-204ENST00000438571 HOXC10Q9NYD6 342 aa21.85■■□□□ 1.09
GTF3A-204ENST00000438571 BMP8BP34820 402 aa21.84■■□□□ 1.09
GTF3A-204ENST00000438571 DPP9Q86TI2 863 aa21.84■■□□□ 1.09
GTF3A-204ENST00000438571 NCAPG2Q86XI2 1143 aa21.84■■□□□ 1.09
GTF3A-204ENST00000438571 LPAR1Q92633 364 aa21.84■■□□□ 1.09
GTF3A-204ENST00000438571 CCDC17Q96LX7 622 aa21.84■■□□□ 1.09
GTF3A-204ENST00000438571 ECHDC1Q9NTX5 307 aa21.84■■□□□ 1.09
GTF3A-204ENST00000438571 WDR46O15213 610 aaKnown RBP21.83■■□□□ 1.09
GTF3A-204ENST00000438571 TMEM132BQ14DG7 1078 aa21.83■■□□□ 1.09
GTF3A-204ENST00000438571 SHCBP1Q8NEM2 672 aa21.83■■□□□ 1.09
GTF3A-204ENST00000438571 OSBP2Q969R2 916 aa21.83■■□□□ 1.09
GTF3A-204ENST00000438571 STRBPQ96SI9 672 aaKnown RBP21.83■■□□□ 1.09
GTF3A-204ENST00000438571 SENP6Q9GZR1 1112 aaPredicted RBP21.83■■□□□ 1.09
GTF3A-204ENST00000438571 COL6A3P12111 3177 aa21.83■■□□□ 1.08
GTF3A-204ENST00000438571 ATN1P54259 1190 aaPredicted RBP21.82■■□□□ 1.08
GTF3A-204ENST00000438571 PRAMEF19Q5SWL8 479 aa21.82■■□□□ 1.08
GTF3A-204ENST00000438571 EPB41L4AQ9HCS5 686 aaPredicted RBP21.82■■□□□ 1.08
GTF3A-204ENST00000438571 GSG1L2A8MUP6 293 aa21.81■■□□□ 1.08
GTF3A-204ENST00000438571 GJC2Q5T442 439 aaPredicted RBP21.81■■□□□ 1.08
GTF3A-204ENST00000438571 OLFML2BQ68BL8 750 aa21.81■■□□□ 1.08
GTF3A-204ENST00000438571 ZSCAN25Q6NSZ9 544 aa21.81■■□□□ 1.08
GTF3A-204ENST00000438571 AMOTL1Q8IY63 956 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms