RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 KANSL2Q9H9L4 492 aa21.43■■□□□ 1.02
CPNE1-213ENST00000434795 ARPP21Q9UBL0 812 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-213ENST00000434795 RPTORQ8N122 1335 aa21.43■■□□□ 1.02
CPNE1-213ENST00000434795 EEF2P13639 858 aaKnown RBP21.42■■□□□ 1.02
CPNE1-213ENST00000434795 MX1P20591 662 aa21.42■■□□□ 1.02
CPNE1-213ENST00000434795 ICA1Q05084 483 aa21.42■■□□□ 1.02
CPNE1-213ENST00000434795 LRRFIP1Q32MZ4 808 aaKnown RBP21.42■■□□□ 1.02
CPNE1-213ENST00000434795 MAP3K21Q5TCX8 1036 aa21.42■■□□□ 1.02
CPNE1-213ENST00000434795 NAV1Q8NEY1 1877 aa21.42■■□□□ 1.02
CPNE1-213ENST00000434795 LPAR1Q92633 364 aa21.42■■□□□ 1.02
CPNE1-213ENST00000434795 GCC1Q96CN9 775 aa21.42■■□□□ 1.02
CPNE1-213ENST00000434795 SEC62Q99442 399 aaKnown RBP21.42■■□□□ 1.02
CPNE1-213ENST00000434795 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.42■■□□□ 1.026e-9■□□□□ 10.4
CPNE1-213ENST00000434795 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
CPNE1-213ENST00000434795 ARHGEF10LQ9HCE6 1279 aa21.42■■□□□ 1.02
CPNE1-213ENST00000434795 HMX1Q9NP08 348 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-213ENST00000434795 MINDY4BA8MYZ0 360 aa21.41■■□□□ 1.02
CPNE1-213ENST00000434795 GNAT2P19087 354 aa21.41■■□□□ 1.02
CPNE1-213ENST00000434795 DSG3P32926 999 aa21.41■■□□□ 1.02
CPNE1-213ENST00000434795 TRMT44Q8IYL2 757 aaKnown RBP21.41■■□□□ 1.02
CPNE1-213ENST00000434795 EPB41L4AQ9HCS5 686 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-213ENST00000434795 STAP2Q9UGK3 403 aa21.41■■□□□ 1.02
CPNE1-213ENST00000434795 RASA1P20936 1047 aa21.4■■□□□ 1.02
CPNE1-213ENST00000434795 PTPREP23469 700 aa21.4■■□□□ 1.02
CPNE1-213ENST00000434795 RGS2P41220 211 aa21.4■■□□□ 1.02
CPNE1-213ENST00000434795 MAP2K5Q13163 448 aa21.4■■□□□ 1.02
CPNE1-213ENST00000434795 AAMPQ13685 434 aa21.4■■□□□ 1.02
CPNE1-213ENST00000434795 ZMYM1Q5SVZ6 1142 aa21.4■■□□□ 1.02
CPNE1-213ENST00000434795 IFNL3Q8IZI9 196 aa21.4■■□□□ 1.02
CPNE1-213ENST00000434795 SPICE1Q8N0Z3 855 aa21.4■■□□□ 1.02
CPNE1-213ENST00000434795 BAZ2AQ9UIF9 1905 aaKnown RBP21.39■■□□□ 1.02
CPNE1-213ENST00000434795 SLC15A5A6NIM6 579 aa21.39■■□□□ 1.01
CPNE1-213ENST00000434795 FARP2O94887 1054 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-213ENST00000434795 APPP05067 770 aa21.39■■□□□ 1.01
CPNE1-213ENST00000434795 CACNB2Q08289 660 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-213ENST00000434795 CCL14Q16627 93 aa21.39■■□□□ 1.01
CPNE1-213ENST00000434795 STK11IPQ8N1F8 1099 aa21.39■■□□□ 1.01
CPNE1-213ENST00000434795 DPF3Q92784 378 aa21.39■■□□□ 1.01
CPNE1-213ENST00000434795 TANGO6Q9C0B7 1094 aa21.39■■□□□ 1.01
CPNE1-213ENST00000434795 SH2D4AQ9H788 454 aa21.39■■□□□ 1.01
CPNE1-213ENST00000434795 MKNK2Q9HBH9 465 aa21.39■■□□□ 1.01
CPNE1-213ENST00000434795 PLXNB2O15031 1838 aa21.39■■□□□ 1.01
CPNE1-213ENST00000434795 H0YGN5 161 aa21.38■■□□□ 1.01
CPNE1-213ENST00000434795 FSD1Q9BTV5 496 aa21.38■■□□□ 1.01
CPNE1-213ENST00000434795 MOV10L1Q9BXT6 1211 aaKnown RBP21.38■■□□□ 1.01
CPNE1-213ENST00000434795 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
CPNE1-213ENST00000434795 ADAMTS5Q9UNA0 930 aa21.38■■□□□ 1.01
CPNE1-213ENST00000434795 WDR46O15213 610 aaKnown RBP21.37■■□□□ 1.01
CPNE1-213ENST00000434795 PRKAR2AP13861 404 aaKnown RBP21.37■■□□□ 1.01
CPNE1-213ENST00000434795 PDE1AP54750 535 aa21.37■■□□□ 1.01
CPNE1-213ENST00000434795 ATP2B2Q01814 1243 aa21.37■■□□□ 1.01
CPNE1-213ENST00000434795 SPATC1LQ9H0A9 340 aa21.37■■□□□ 1.01
CPNE1-213ENST00000434795 CWC22Q9HCG8 908 aaKnown RBP21.37■■□□□ 1.01
CPNE1-213ENST00000434795 CEP290O15078 2479 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 MYH7P12883 1935 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 STRNO43815 780 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 FLOT1O75955 427 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 HOXC6P09630 235 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 ZKSCAN1P17029 563 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-213ENST00000434795 TDO2P48775 406 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 GRB14Q14449 540 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 WDR78Q5VTH9 848 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 MB21D1Q8N884 522 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 PAWRQ96IZ0 340 aaKnown RBP21.36■■□□□ 1.01
CPNE1-213ENST00000434795 APBA2Q99767 749 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 HTATIP2Q9BUP3 242 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 FLRT1Q9NZU1 646 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 NYAP2Q9P242 653 aa21.36■■□□□ 1.01
CPNE1-213ENST00000434795 IGKV6D-41A0A0C4DH26 115 aa21.35■■□□□ 1.01
CPNE1-213ENST00000434795 IGHA2P01877 340 aa21.35■■□□□ 1.01
CPNE1-213ENST00000434795 MNX1P50219 401 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-213ENST00000434795 ZNF444Q8N0Y2 327 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-213ENST00000434795 SHCBP1Q8NEM2 672 aa21.35■■□□□ 1.01
CPNE1-213ENST00000434795 EVI5LQ96CN4 794 aa21.35■■□□□ 1.01
CPNE1-213ENST00000434795 ATG4CQ96DT6 458 aa21.35■■□□□ 1.01
CPNE1-213ENST00000434795 NACAP1Q9BZK3 213 aa21.35■■□□□ 1.01
CPNE1-213ENST00000434795 RWDD1Q9H446 243 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-213ENST00000434795 OGDHLQ9ULD0 1010 aa21.35■■□□□ 1.01
CPNE1-213ENST00000434795 ROBO3Q96MS0 1386 aa21.35■■□□□ 1.01
CPNE1-213ENST00000434795 IGHDP01880 384 aa21.34■■□□□ 1.01
CPNE1-213ENST00000434795 ERCC3P19447 782 aa21.34■■□□□ 1.01
CPNE1-213ENST00000434795 HABP4Q5JVS0 413 aaKnown RBP21.34■■□□□ 1.01
CPNE1-213ENST00000434795 LHX8Q68G74 356 aa21.34■■□□□ 1.01
CPNE1-213ENST00000434795 SMC5Q8IY18 1101 aa21.34■■□□□ 1.01
CPNE1-213ENST00000434795 ANKLE1Q8NAG6 615 aa21.34■■□□□ 1.01
CPNE1-213ENST00000434795 NPLOC4Q8TAT6 608 aa21.34■■□□□ 1.01
CPNE1-213ENST00000434795 MKL1Q969V6 931 aa21.34■■□□□ 1.01
CPNE1-213ENST00000434795 GOPCQ9HD26 462 aa21.34■■□□□ 1.01
CPNE1-213ENST00000434795 IVNS1ABPQ9Y6Y0 642 aa21.34■■□□□ 1.01
CPNE1-213ENST00000434795 FOXP2O15409 715 aa21.33■■□□□ 1.01
CPNE1-213ENST00000434795 PRDM1O75626 825 aa21.33■■□□□ 1.01
CPNE1-213ENST00000434795 CCND3P30281 292 aaPredicted RBP21.33■■□□□ 1.01
CPNE1-213ENST00000434795 TMEM132BQ14DG7 1078 aa21.33■■□□□ 1.01
CPNE1-213ENST00000434795 NECAB2Q7Z6G3 386 aa21.33■■□□□ 1.01
CPNE1-213ENST00000434795 DIS3LQ8TF46 1054 aaKnown RBP21.33■■□□□ 1.01
CPNE1-213ENST00000434795 ZNF287Q9HBT7 754 aa21.33■■□□□ 1.01
CPNE1-213ENST00000434795 FBXO28Q9NVF7 368 aa21.33■■□□□ 1.01
CPNE1-213ENST00000434795 CLIP2Q9UDT6 1046 aa21.33■■□□□ 1.01
CPNE1-213ENST00000434795 F5H6K3 240 aa21.32■■□□□ 1
CPNE1-213ENST00000434795 KLRC3Q07444 240 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms