RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 SAR1BQ9Y6B6 198 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 MED23Q9ULK4 1368 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 SOS2Q07890 1332 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 SYNRGQ9UMZ2 1314 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 CYP7A1P22680 504 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 RFC4P35249 363 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 ACTN3Q08043 901 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 ODF2Q5BJF6 829 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 TMTC1Q8IUR5 882 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 MAGEB6Q8N7X4 407 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 GPR108Q9NPR9 543 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 BCCIPQ9P287 314 aaKnown RBP eCLIP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 DCCP43146 1447 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 MYO1FO00160 1098 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 CDC27P30260 824 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 IL6STP40189 918 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 CLNS1AP54105 237 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 RRAGBQ5VZM2 374 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 MFSD6Q6ZSS7 791 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 NLRP10Q86W26 655 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 LPIN2Q92539 896 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 CTAGE1Q96RT6 745 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 NAA15Q9BXJ9 866 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 RNF41Q9H4P4 317 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 FMN2Q9NZ56 1722 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 CHD2O14647 1828 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 RANBP6O60518 1105 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 CIAO1O76071 339 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 IDEP14735 1019 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 CDC25AP30304 524 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 UBXN1Q04323 297 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 SF3A3Q12874 501 aaKnown RBP eCLIP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 PPFIA1Q13136 1202 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 HLFQ16534 295 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 LRCH2Q5VUJ6 765 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 CYP26C1Q6V0L0 522 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 MAATS1Q7Z4T9 603 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 MSANTD4Q8NCY6 345 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 KAZALD1Q96I82 304 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 DSCC1Q9BVC3 393 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 INTS13Q9NVM9 706 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 CTNND2Q9UQB3 1225 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 SLC4A4Q9Y6R1 1079 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 GOLGA6L10A6NI86 522 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 MYO1BO43795 1136 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 CASP1P29466 404 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 HPDP32754 393 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 IRAK1P51617 712 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 E2F5Q15329 346 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 CEP85LQ5SZL2 805 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 DZIP1Q86YF9 867 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 SUGP1Q8IWZ8 645 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 MIGA1Q8NAN2 632 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 PANX2Q96RD6 677 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 SELENOOQ9BVL4 669 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 TRIM10Q9UDY6 481 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 ODF2LQ9ULJ1 636 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 KDM6AO15550 1401 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 CPDO75976 1380 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 OVOS2A0A0G2JMS6 1433 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 GNPATO15228 680 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 RAD21O60216 631 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 EZRP15311 586 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 SSRP1Q08945 709 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 C2orf54Q08AI8 447 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 RABL6Q3YEC7 729 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 USPL1Q5W0Q7 1092 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 TMEM139Q8IV31 216 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 SYNE4Q8N205 404 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 COG1Q8WTW3 980 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 IFT81Q8WYA0 676 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 JAKMIP2Q96AA8 810 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 VEZTQ9HBM0 779 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 CD248Q9HCU0 757 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 TUBE1Q9UJT0 475 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 HPCAL4Q9UM19 191 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 KCNJ14Q9UNX9 436 aa8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-203ENST00000434046 ZBTB43O43298 467 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 MBD4O95243 580 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 CRKLP46109 303 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 IFT88Q13099 833 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 NEDD9Q14511 834 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 TPTE2Q6XPS3 522 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 CCDC121Q6ZUS5 278 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 ENOX1Q8TC92 643 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 MAGEC2Q9UBF1 373 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 RAB21Q9UL25 225 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 KRT86O43790 486 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 MFAP3LO75121 409 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 PDE8BO95263 885 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 RPSAP08865 295 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 SCP2P22307 547 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 USP5P45974 858 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 CCDC96Q2M329 555 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 KANK3Q6NY19 840 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 IQCA1Q86XH1 822 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 WASF1Q92558 559 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 KAT2BQ92831 832 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 TFR2Q9UP52 801 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms