RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 MYH4Q9Y623 1939 aa18.02■□□□□ 0.47
CNOT9-205ENST00000433439 FAM155AB1AL88 458 aaPredicted RBP18.01■□□□□ 0.47
CNOT9-205ENST00000433439 ZBTB48P10074 688 aaPredicted RBP18.01■□□□□ 0.47
CNOT9-205ENST00000433439 TOP1P11387 765 aaKnown RBP18.01■□□□□ 0.47
CNOT9-205ENST00000433439 BACE1P56817 501 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 EXOSC10Q01780 885 aaKnown RBP18.01■□□□□ 0.47
CNOT9-205ENST00000433439 SNAPC2Q13487 334 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 RCSD1Q6JBY9 416 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 Q6ZUG5 572 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 SPICE1Q8N0Z3 855 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 IGDCC4Q8TDY8 1250 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 TTC14Q96N46 770 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 PDRG1Q9NUG6 133 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 TMOD4Q9NZQ9 345 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 NAP1L2Q9ULW6 460 aaPredicted RBP18.01■□□□□ 0.47
CNOT9-205ENST00000433439 TMX2Q9Y320 296 aa18.01■□□□□ 0.47
CNOT9-205ENST00000433439 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
CNOT9-205ENST00000433439 CXCL11O14625 94 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 AOC2O75106 756 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 NEK4P51957 841 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 GTF2A2P52657 109 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 SEC23AQ15436 765 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 USP17L2Q6R6M4 530 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 NOL8Q76FK4 1167 aaKnown RBP18■□□□□ 0.47
CNOT9-205ENST00000433439 DGKHQ86XP1 1220 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 KIF2CQ99661 725 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 LARP6Q9BRS8 491 aaKnown RBP18■□□□□ 0.47
CNOT9-205ENST00000433439 KIAA1683Q9H0B3 1180 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 GOPCQ9HD26 462 aa18■□□□□ 0.47
CNOT9-205ENST00000433439 CCL15-CCL14A0A0B4J2E2 113 aa17.99■□□□□ 0.47
CNOT9-205ENST00000433439 CCDC69A6NI79 296 aa17.99■□□□□ 0.47
CNOT9-205ENST00000433439 C19orf81C9J6K1 198 aa17.99■□□□□ 0.47
CNOT9-205ENST00000433439 USP14P54578 494 aa17.99■□□□□ 0.47
CNOT9-205ENST00000433439 CCL15Q16663 113 aa17.99■□□□□ 0.47
CNOT9-205ENST00000433439 RAB11FIP4Q86YS3 637 aa17.99■□□□□ 0.47
CNOT9-205ENST00000433439 ZIC5Q96T25 663 aa17.99■□□□□ 0.47
CNOT9-205ENST00000433439 LY9Q9HBG7 655 aa17.99■□□□□ 0.47
CNOT9-205ENST00000433439 KCNH4Q9UQ05 1017 aa17.99■□□□□ 0.47
CNOT9-205ENST00000433439 WDR19Q8NEZ3 1342 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
CNOT9-205ENST00000433439 F5H6K3 240 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 CETPP11597 493 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 VEGFBP49765 207 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 KIF23Q02241 960 aaPredicted RBP17.98■□□□□ 0.47
CNOT9-205ENST00000433439 KLRC3Q07444 240 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 KIAA1755Q5JYT7 1200 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 SLFN13Q68D06 897 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
CNOT9-205ENST00000433439 RASGRP2Q7LDG7 609 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 BRF1Q92994 677 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 MKL1Q969V6 931 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 NUP88Q99567 741 aaPredicted RBP17.98■□□□□ 0.47
CNOT9-205ENST00000433439 MYL10Q9BUA6 226 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 VCPKMTQ9H867 229 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 EMILIN3Q9NT22 766 aa17.98■□□□□ 0.47
CNOT9-205ENST00000433439 A0A0G2JLL6 359 aaPredicted RBP17.97■□□□□ 0.47
CNOT9-205ENST00000433439 MANSC4A6NHS7 340 aaPredicted RBP17.97■□□□□ 0.47
CNOT9-205ENST00000433439 NDUFB10O96000 172 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 NOVP48745 357 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 APOBRQ0VD83 1088 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 NOGQ13253 232 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 CCDC96Q2M329 555 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 PRRT2Q7Z6L0 340 aaPredicted RBP17.97■□□□□ 0.47
CNOT9-205ENST00000433439 NUP133Q8WUM0 1156 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 ANKS1AQ92625 1134 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 IL17RAQ96F46 866 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 MS4A4AQ96JQ5 239 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 MTA3Q9BTC8 594 aa17.97■□□□□ 0.47
CNOT9-205ENST00000433439 RXRAP19793 462 aa17.96■□□□□ 0.47
CNOT9-205ENST00000433439 LIFRP42702 1097 aa17.96■□□□□ 0.47
CNOT9-205ENST00000433439 RABEP1Q15276 862 aa17.96■□□□□ 0.47
CNOT9-205ENST00000433439 SH3D19Q5HYK7 790 aa17.96■□□□□ 0.47
CNOT9-205ENST00000433439 SYNE3Q6ZMZ3 975 aa17.96■□□□□ 0.47
CNOT9-205ENST00000433439 FASTKD5Q7L8L6 764 aaKnown RBP17.96■□□□□ 0.47
CNOT9-205ENST00000433439 CATIPQ7Z7H3 387 aa17.96■□□□□ 0.47
CNOT9-205ENST00000433439 TMTC2Q8N394 836 aa17.96■□□□□ 0.47
CNOT9-205ENST00000433439 BRI3BPQ8WY22 251 aa17.96■□□□□ 0.47
CNOT9-205ENST00000433439 SLC12A7Q9Y666 1083 aa17.96■□□□□ 0.47
CNOT9-205ENST00000433439 FRMPD2Q68DX3 1309 aaPredicted RBP17.96■□□□□ 0.46
CNOT9-205ENST00000433439 KLF18A0A0U1RQI7 1052 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 VCAM1P19320 739 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 AK2P54819 239 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 TOB2Q14106 344 aaPredicted RBP17.95■□□□□ 0.46
CNOT9-205ENST00000433439 FAM83BQ5T0W9 1011 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 TREML2Q5T2D2 321 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 CCDC144CPQ8IYA2 1237 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 ZNF654Q8IZM8 581 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 GMCL1P1Q8NEA9 526 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 TANGO6Q9C0B7 1094 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 RPAP3Q9H6T3 665 aaPredicted RBP17.95■□□□□ 0.46
CNOT9-205ENST00000433439 BRPF3Q9ULD4 1205 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 PTPRFP10586 1907 aa17.95■□□□□ 0.46
CNOT9-205ENST00000433439 SLC1A4P43007 532 aa17.94■□□□□ 0.46
CNOT9-205ENST00000433439 SREBF2Q12772 1141 aa17.94■□□□□ 0.46
CNOT9-205ENST00000433439 IKQ13123 557 aaPredicted RBP17.94■□□□□ 0.46
CNOT9-205ENST00000433439 KCTD1Q719H9 257 aa17.94■□□□□ 0.46
CNOT9-205ENST00000433439 MICU3Q86XE3 530 aa17.94■□□□□ 0.46
CNOT9-205ENST00000433439 PROCA1Q8NCQ7 364 aaPredicted RBP17.94■□□□□ 0.46
CNOT9-205ENST00000433439 LPAR1Q92633 364 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms