RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SWAP70Q9UH65 585 aa20.6■□□□□ 0.89
CPSF4-203ENST00000430038 A0A0G2JMZ2 1700 aa20.6■□□□□ 0.89
CPSF4-203ENST00000430038 GREB1LQ9C091 1923 aaPredicted RBP20.6■□□□□ 0.89
CPSF4-203ENST00000430038 GSG1L2A8MUP6 293 aa20.59■□□□□ 0.89
CPSF4-203ENST00000430038 TMEM179Q6ZVK1 233 aa20.59■□□□□ 0.89
CPSF4-203ENST00000430038 SPICE1Q8N0Z3 855 aa20.59■□□□□ 0.89
CPSF4-203ENST00000430038 GTF3C2Q8WUA4 911 aaPredicted RBP20.59■□□□□ 0.89
CPSF4-203ENST00000430038 PRO3102Q9H379 93 aa20.59■□□□□ 0.89
CPSF4-203ENST00000430038 FRMPD3Q5JV73 1810 aa20.59■□□□□ 0.89
CPSF4-203ENST00000430038 PTPREP23469 700 aa20.58■□□□□ 0.89
CPSF4-203ENST00000430038 MAP2K5Q13163 448 aa20.58■□□□□ 0.89
CPSF4-203ENST00000430038 LHX8Q68G74 356 aa20.58■□□□□ 0.89
CPSF4-203ENST00000430038 KBTBD3Q8NAB2 608 aa20.58■□□□□ 0.89
CPSF4-203ENST00000430038 NPLOC4Q8TAT6 608 aa20.58■□□□□ 0.89
CPSF4-203ENST00000430038 SOCS4Q8WXH5 440 aa20.58■□□□□ 0.89
CPSF4-203ENST00000430038 HTATIP2Q9BUP3 242 aa20.58■□□□□ 0.89
CPSF4-203ENST00000430038 RBM27Q9P2N5 1060 aaKnown RBP20.58■□□□□ 0.89
CPSF4-203ENST00000430038 TMX2Q9Y320 296 aa20.58■□□□□ 0.89
CPSF4-203ENST00000430038 IGHA2P01877 340 aa20.57■□□□□ 0.88
CPSF4-203ENST00000430038 COG2Q14746 738 aa20.57■□□□□ 0.88
CPSF4-203ENST00000430038 STK11IPQ8N1F8 1099 aa20.57■□□□□ 0.88
CPSF4-203ENST00000430038 MOV10L1Q9BXT6 1211 aaKnown RBP20.57■□□□□ 0.88
CPSF4-203ENST00000430038 EPB41L4AQ9HCS5 686 aaPredicted RBP20.57■□□□□ 0.88
CPSF4-203ENST00000430038 OGDHLQ9ULD0 1010 aa20.57■□□□□ 0.88
CPSF4-203ENST00000430038 M0R2C6 588 aa20.56■□□□□ 0.88
CPSF4-203ENST00000430038 RGS2P41220 211 aa20.56■□□□□ 0.88
CPSF4-203ENST00000430038 PI4K2BQ8TCG2 481 aa20.56■□□□□ 0.88
CPSF4-203ENST00000430038 SEC62Q99442 399 aaKnown RBP20.56■□□□□ 0.88
CPSF4-203ENST00000430038 DNAH12Q6ZR08 3092 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 RNF113AO15541 343 aaKnown RBP20.55■□□□□ 0.88
CPSF4-203ENST00000430038 EEF2P13639 858 aaKnown RBP20.55■□□□□ 0.88
CPSF4-203ENST00000430038 ZKSCAN1P17029 563 aaPredicted RBP20.55■□□□□ 0.88
CPSF4-203ENST00000430038 DSG3P32926 999 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 ICA1Q05084 483 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 GRB14Q14449 540 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 WDR78Q5VTH9 848 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 ZSCAN25Q6NSZ9 544 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 CCAR1Q8IX12 1150 aaKnown RBP20.55■□□□□ 0.88
CPSF4-203ENST00000430038 ATG4CQ96DT6 458 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 APBA2Q99767 749 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 TANGO6Q9C0B7 1094 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 VCPKMTQ9H867 229 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 LAMA3Q16787 3333 aa20.55■□□□□ 0.88
CPSF4-203ENST00000430038 SLC15A5A6NIM6 579 aa20.54■□□□□ 0.88
CPSF4-203ENST00000430038 NECAB2Q7Z6G3 386 aa20.54■□□□□ 0.88
CPSF4-203ENST00000430038 TRPV1Q8NER1 839 aa20.54■□□□□ 0.88
CPSF4-203ENST00000430038 CCDC17Q96LX7 622 aa20.54■□□□□ 0.88
CPSF4-203ENST00000430038 FBXO28Q9NVF7 368 aa20.54■□□□□ 0.88
CPSF4-203ENST00000430038 HOXC10Q9NYD6 342 aa20.54■□□□□ 0.88
CPSF4-203ENST00000430038 PFASO15067 1338 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 SMCHD1A6NHR9 2005 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 EVI5O60447 810 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 RASA1P20936 1047 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 RRP1P56182 461 aaKnown RBP20.53■□□□□ 0.88
CPSF4-203ENST00000430038 CCNA1P78396 465 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 SBK1Q52WX2 424 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 ANKLE1Q8NAG6 615 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 APPBP2Q92624 585 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 CRBNQ96SW2 442 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 SPATC1LQ9H0A9 340 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 MYH4Q9Y623 1939 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 SALL3Q9BXA9 1300 aa20.53■□□□□ 0.88
CPSF4-203ENST00000430038 GPAA1O43292 621 aa20.52■□□□□ 0.88
CPSF4-203ENST00000430038 COBLO75128 1261 aa20.52■□□□□ 0.88
CPSF4-203ENST00000430038 HOXC6P09630 235 aa20.52■□□□□ 0.88
CPSF4-203ENST00000430038 ERCC3P19447 782 aa20.52■□□□□ 0.88
CPSF4-203ENST00000430038 CYP2C19P33261 490 aa20.52■□□□□ 0.88
CPSF4-203ENST00000430038 ARHGEF10LQ9HCE6 1279 aa20.52■□□□□ 0.88
CPSF4-203ENST00000430038 ZNF236Q9UL36 1845 aa20.51■□□□□ 0.87
CPSF4-203ENST00000430038 MINDY4BA8MYZ0 360 aa20.51■□□□□ 0.87
CPSF4-203ENST00000430038 FLOT1O75955 427 aa20.51■□□□□ 0.87
CPSF4-203ENST00000430038 CAPN2P17655 700 aa20.51■□□□□ 0.87
CPSF4-203ENST00000430038 ATP2B2Q01814 1243 aa20.51■□□□□ 0.87
CPSF4-203ENST00000430038 TMEM132BQ14DG7 1078 aa20.51■□□□□ 0.87
CPSF4-203ENST00000430038 TRMT44Q8IYL2 757 aaKnown RBP20.51■□□□□ 0.87
CPSF4-203ENST00000430038 LPAR1Q92633 364 aa20.51■□□□□ 0.87
CPSF4-203ENST00000430038 NBPF3Q9H094 633 aa20.51■□□□□ 0.87
CPSF4-203ENST00000430038 ARPP21Q9UBL0 812 aaPredicted RBP20.51■□□□□ 0.87
CPSF4-203ENST00000430038 ADAMTS5Q9UNA0 930 aa20.51■□□□□ 0.87
CPSF4-203ENST00000430038 COL6A1P12109 1028 aa20.5■□□□□ 0.87
CPSF4-203ENST00000430038 ADORA2AP29274 412 aa20.5■□□□□ 0.87
CPSF4-203ENST00000430038 SAMD1Q6SPF0 538 aaPredicted RBP20.5■□□□□ 0.87
CPSF4-203ENST00000430038 C11orf49Q9H6J7 331 aa20.5■□□□□ 0.87
CPSF4-203ENST00000430038 KANSL2Q9H9L4 492 aa20.5■□□□□ 0.87
CPSF4-203ENST00000430038 CWC22Q9HCG8 908 aaKnown RBP20.5■□□□□ 0.87
CPSF4-203ENST00000430038 STAP2Q9UGK3 403 aa20.5■□□□□ 0.87
CPSF4-203ENST00000430038 NR2E3Q9Y5X4 410 aa20.5■□□□□ 0.87
CPSF4-203ENST00000430038 ROBO3Q96MS0 1386 aa20.49■□□□□ 0.87
CPSF4-203ENST00000430038 FOXP2O15409 715 aa20.49■□□□□ 0.87
CPSF4-203ENST00000430038 PRDM1O75626 825 aa20.49■□□□□ 0.87
CPSF4-203ENST00000430038 GIMAP6Q6P9H5 292 aa20.49■□□□□ 0.87
CPSF4-203ENST00000430038 NUP88Q99567 741 aaPredicted RBP20.49■□□□□ 0.87
CPSF4-203ENST00000430038 TTC41PQ6P2S7 1318 aa20.49■□□□□ 0.87
CPSF4-203ENST00000430038 PLXNA1Q9UIW2 1896 aa20.48■□□□□ 0.87
CPSF4-203ENST00000430038 IGKV6D-41A0A0C4DH26 115 aa20.48■□□□□ 0.87
CPSF4-203ENST00000430038 WDR46O15213 610 aaKnown RBP20.48■□□□□ 0.87
CPSF4-203ENST00000430038 GLRX3O76003 335 aaKnown RBP20.48■□□□□ 0.87
CPSF4-203ENST00000430038 PLS1Q14651 629 aa20.48■□□□□ 0.87
CPSF4-203ENST00000430038 FAM83BQ5T0W9 1011 aa20.48■□□□□ 0.87
CPSF4-203ENST00000430038 C7orf61Q8IZ16 206 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms