RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 BECN2A8MW95 431 aa18.08■□□□□ 0.48
TVP23C-203ENST00000428082 NEMFO60524 1076 aa18.08■□□□□ 0.48
TVP23C-203ENST00000428082 ANTXR2P58335 489 aa18.08■□□□□ 0.48
TVP23C-203ENST00000428082 CEP57L1Q8IYX8 460 aa18.08■□□□□ 0.48
TVP23C-203ENST00000428082 KCNF1Q9H3M0 494 aa18.08■□□□□ 0.48
TVP23C-203ENST00000428082 HACL1Q9UJ83 578 aa18.08■□□□□ 0.48
TVP23C-203ENST00000428082 ROBO3Q96MS0 1386 aa18.08■□□□□ 0.48
TVP23C-203ENST00000428082 SIPA1L1O43166 1804 aa18.07■□□□□ 0.48
TVP23C-203ENST00000428082 PRDM1O75626 825 aa18.07■□□□□ 0.48
TVP23C-203ENST00000428082 GUCY1B3Q02153 619 aa18.07■□□□□ 0.48
TVP23C-203ENST00000428082 IQCB1Q15051 598 aa18.07■□□□□ 0.48
TVP23C-203ENST00000428082 ZRSR1Q15695 479 aaKnown RBP18.07■□□□□ 0.48
TVP23C-203ENST00000428082 FKBP1CQ5VVH2 108 aa18.07■□□□□ 0.48
TVP23C-203ENST00000428082 LINC00301Q8NCQ3 95 aa18.07■□□□□ 0.48
TVP23C-203ENST00000428082 MRFAP1L1Q96HT8 127 aa18.07■□□□□ 0.48
TVP23C-203ENST00000428082 GOLPH3LQ9H4A5 285 aa18.07■□□□□ 0.48
TVP23C-203ENST00000428082 ADARB2Q9NS39 739 aaKnown RBP18.07■□□□□ 0.48
TVP23C-203ENST00000428082 PCDHA7Q9UN72 937 aa18.07■□□□□ 0.48
TVP23C-203ENST00000428082 B4E1Z4 1266 aa18.06■□□□□ 0.48
TVP23C-203ENST00000428082 RRP12Q5JTH9 1297 aaKnown RBP18.06■□□□□ 0.48
TVP23C-203ENST00000428082 ZSCAN29Q8IWY8 852 aaPredicted RBP18.06■□□□□ 0.48
TVP23C-203ENST00000428082 RNF41Q9H4P4 317 aaPredicted RBP18.06■□□□□ 0.48
TVP23C-203ENST00000428082 TOMM22Q9NS69 142 aa18.06■□□□□ 0.48
TVP23C-203ENST00000428082 SPTLC2O15270 562 aa18.06■□□□□ 0.48
TVP23C-203ENST00000428082 SLC3A2P08195 630 aaKnown RBP18.06■□□□□ 0.48
TVP23C-203ENST00000428082 FGRP09769 529 aa18.06■□□□□ 0.48
TVP23C-203ENST00000428082 GTF2F1P35269 517 aaKnown RBP eCLIP18.06■□□□□ 0.48
TVP23C-203ENST00000428082 METAP2P50579 478 aaKnown RBP eCLIP18.06■□□□□ 0.48
TVP23C-203ENST00000428082 MYSM1Q5VVJ2 828 aa18.06■□□□□ 0.48
TVP23C-203ENST00000428082 FMR1NBQ8N0W7 255 aaPredicted RBP18.06■□□□□ 0.48
TVP23C-203ENST00000428082 SLC44A5Q8NCS7 719 aa18.06■□□□□ 0.48
TVP23C-203ENST00000428082 FAM151AQ8WW52 585 aa18.06■□□□□ 0.48
TVP23C-203ENST00000428082 DHX36Q9H2U1 1008 aaKnown RBP18.06■□□□□ 0.48
TVP23C-203ENST00000428082 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.06■□□□□ 0.48
TVP23C-203ENST00000428082 SCN4AP35499 1836 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 WDR90Q96KV7 1748 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 SH2B2O14492 632 aaPredicted RBP18.05■□□□□ 0.48
TVP23C-203ENST00000428082 SLURP2P0DP57 97 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 PTGS1P23219 599 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 ANGEL2Q5VTE6 544 aaKnown RBP18.05■□□□□ 0.48
TVP23C-203ENST00000428082 CCDC186Q7Z3E2 898 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 JMYQ8N9B5 988 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 SDF4Q9BRK5 362 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 TMEM39BQ9GZU3 492 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 CNNM2Q9H8M5 875 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 CLIP2Q9UDT6 1046 aa18.05■□□□□ 0.48
TVP23C-203ENST00000428082 POLR2AP24928 1970 aaKnown RBP18.05■□□□□ 0.48
TVP23C-203ENST00000428082 COL2A1P02458 1487 aaPredicted RBP18.05■□□□□ 0.48
TVP23C-203ENST00000428082 ATRNL1Q5VV63 1379 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 HLA-DOAP06340 250 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 PDE4BQ07343 736 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 DHX8Q14562 1220 aaKnown RBP18.04■□□□□ 0.48
TVP23C-203ENST00000428082 C16orf86Q6ZW13 317 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 CYB5R4Q7L1T6 521 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 FAM83AQ86UY5 434 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 CDAN1Q8IWY9 1227 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 KRT23Q9C075 422 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 FTOQ9C0B1 505 aaKnown RBP eCLIP18.04■□□□□ 0.48
TVP23C-203ENST00000428082 GPHNQ9NQX3 736 aaPredicted RBP18.04■□□□□ 0.48
TVP23C-203ENST00000428082 POTECB2RU33 542 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 GABPAQ06546 454 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 GGA3Q9NZ52 723 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 ZSWIM5Q9P217 1185 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 SERPINB13Q9UIV8 391 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 PYCARDQ9ULZ3 195 aa18.04■□□□□ 0.48
TVP23C-203ENST00000428082 MYH8P13535 1937 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 ORC4O43929 436 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 PCP11498 1178 aaKnown RBP18.03■□□□□ 0.48
TVP23C-203ENST00000428082 EPHX2P34913 555 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 CDK8P49336 464 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 KIF23Q02241 960 aaPredicted RBP18.03■□□□□ 0.48
TVP23C-203ENST00000428082 RASA3Q14644 834 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 ANO1Q5XXA6 986 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 CSRNP1Q96S65 589 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 BPIFA3Q9BQP9 254 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 MTA3Q9BTC8 594 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 PI4KBQ9UBF8 816 aa18.03■□□□□ 0.48
TVP23C-203ENST00000428082 RANBP6O60518 1105 aaKnown RBP18.02■□□□□ 0.48
TVP23C-203ENST00000428082 TNNI2P48788 182 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 TPM4P67936 248 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 TNFAIP1Q13829 316 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 TRIM29Q14134 588 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 SGMS1Q86VZ5 419 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 WASF1Q92558 559 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 ALG1Q9BT22 464 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 EHD4Q9H223 541 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 MKNK2Q9HBH9 465 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 PGAP2Q9UHJ9 254 aa18.02■□□□□ 0.48
TVP23C-203ENST00000428082 FAM196BA6NMK8 535 aa18.02■□□□□ 0.47
TVP23C-203ENST00000428082 ZBTB43O43298 467 aa18.02■□□□□ 0.47
TVP23C-203ENST00000428082 CMA1P23946 247 aa18.02■□□□□ 0.47
TVP23C-203ENST00000428082 LIFRP42702 1097 aa18.02■□□□□ 0.47
TVP23C-203ENST00000428082 C11orf57Q6ZUT1 292 aaPredicted RBP18.02■□□□□ 0.47
TVP23C-203ENST00000428082 ESR2Q92731 530 aa18.02■□□□□ 0.47
TVP23C-203ENST00000428082 TIGD1Q96MW7 591 aa18.02■□□□□ 0.47
TVP23C-203ENST00000428082 DNAJC18Q9H819 358 aa18.02■□□□□ 0.47
TVP23C-203ENST00000428082 FAM13BQ9NYF5 915 aa18.02■□□□□ 0.47
TVP23C-203ENST00000428082 STK36Q9NRP7 1315 aa18.01■□□□□ 0.47
TVP23C-203ENST00000428082 RASA1P20936 1047 aa18.01■□□□□ 0.47
TVP23C-203ENST00000428082 FAM47AQ5JRC9 791 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms