RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 GDAQ9Y2T3 454 aa16.32■□□□□ 0.2
ERCC3-202ENST00000426778 XDHP47989 1333 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 TRIM49BA6NDI0 452 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 PP2D1A8MPX8 630 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 GNAT2P19087 354 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 FUT2Q10981 343 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 DHX8Q14562 1220 aaKnown RBP16.31■□□□□ 0.2
ERCC3-202ENST00000426778 MCM6Q14566 821 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 IL17AQ16552 155 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 MTRQ99707 1265 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 RNF26Q9BY78 433 aaPredicted RBP16.31■□□□□ 0.2
ERCC3-202ENST00000426778 TFCP2L1Q9NZI6 479 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 N4BP3O15049 544 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 NPY5RQ15761 445 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 KIF4BQ2VIQ3 1234 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 SLC35F6Q8N357 371 aa16.31■□□□□ 0.2
ERCC3-202ENST00000426778 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
ERCC3-202ENST00000426778 EIF5P55010 431 aaKnown RBP16.3■□□□□ 0.2
ERCC3-202ENST00000426778 TROAPQ12815 778 aa16.3■□□□□ 0.2
ERCC3-202ENST00000426778 ZNF579Q8NAF0 562 aaKnown RBP16.3■□□□□ 0.2
ERCC3-202ENST00000426778 SLF1Q9BQI6 1058 aa16.3■□□□□ 0.2
ERCC3-202ENST00000426778 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
ERCC3-202ENST00000426778 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
ERCC3-202ENST00000426778 XBP1P17861 261 aa16.3■□□□□ 0.2
ERCC3-202ENST00000426778 NLRP5P59047 1200 aa16.3■□□□□ 0.2
ERCC3-202ENST00000426778 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-202ENST00000426778 ITPK1Q13572 414 aa16.3■□□□□ 0.2
ERCC3-202ENST00000426778 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
ERCC3-202ENST00000426778 KRT31Q15323 416 aa16.3■□□□□ 0.2
ERCC3-202ENST00000426778 RSRC2Q7L4I2 434 aaKnown RBP16.3■□□□□ 0.2
ERCC3-202ENST00000426778 TMTC2Q8N394 836 aa16.3■□□□□ 0.2
ERCC3-202ENST00000426778 NUP88Q99567 741 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-202ENST00000426778 PLEKHG2Q9H7P9 1386 aa16.3■□□□□ 0.2
ERCC3-202ENST00000426778 COL1A1P02452 1464 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-202ENST00000426778 MFAP3LO75121 409 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 ERVK-24P63145 666 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 KANK3Q6NY19 840 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 PNKPQ96T60 521 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 ARFGAP3Q9NP61 516 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 TUBB4AP04350 444 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 ERCC5P28715 1186 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-202ENST00000426778 CHMP4BP1P59074 171 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 RASGRP2Q7LDG7 609 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 TRIML1Q8N9V2 468 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 HINFPQ9BQA5 517 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 CCDC87Q9NVE4 849 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 MYH13Q9UKX3 1938 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 CTR9Q6PD62 1173 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 GPR161Q8N6U8 529 aaKnown RBP16.29■□□□□ 0.2
ERCC3-202ENST00000426778 GOLGA1Q92805 767 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 CHP1Q99653 195 aa16.29■□□□□ 0.2
ERCC3-202ENST00000426778 KIF5CO60282 957 aa16.28■□□□□ 0.2
ERCC3-202ENST00000426778 CAMTA2O94983 1202 aa16.28■□□□□ 0.2
ERCC3-202ENST00000426778 NTSR2O95665 410 aa16.28■□□□□ 0.2
ERCC3-202ENST00000426778 HNRNPH2P55795 449 aaKnown RBP16.28■□□□□ 0.2
ERCC3-202ENST00000426778 CPVLQ9H3G5 476 aa16.28■□□□□ 0.2
ERCC3-202ENST00000426778 H3BQF6 201 aa16.28■□□□□ 0.2
ERCC3-202ENST00000426778 ENC1O14682 589 aa16.28■□□□□ 0.2
ERCC3-202ENST00000426778 CDKAL1Q5VV42 579 aa16.28■□□□□ 0.2
ERCC3-202ENST00000426778 SH3RF1Q7Z6J0 888 aa16.28■□□□□ 0.2
ERCC3-202ENST00000426778 RASSF8Q8NHQ8 419 aa16.28■□□□□ 0.2
ERCC3-202ENST00000426778 CELF1Q92879 486 aaKnown RBP16.28■□□□□ 0.2
ERCC3-202ENST00000426778 ADAMTS2O95450 1211 aa16.27■□□□□ 0.2
ERCC3-202ENST00000426778 PRDX5P30044 214 aa16.27■□□□□ 0.2
ERCC3-202ENST00000426778 CYP2C19P33261 490 aa16.27■□□□□ 0.2
ERCC3-202ENST00000426778 LONRF2Q1L5Z9 754 aa16.27■□□□□ 0.2
ERCC3-202ENST00000426778 NCAPH2Q6IBW4 605 aa16.27■□□□□ 0.2
ERCC3-202ENST00000426778 FUT8Q9BYC5 575 aa16.27■□□□□ 0.2
ERCC3-202ENST00000426778 XIRP1Q702N8 1843 aaKnown RBP16.27■□□□□ 0.2
ERCC3-202ENST00000426778 RTL9Q8NET4 1388 aa16.27■□□□□ 0.19
ERCC3-202ENST00000426778 GOLGA6L9A6NEM1 432 aa16.27■□□□□ 0.19
ERCC3-202ENST00000426778 PRPF3O43395 683 aaKnown RBP16.27■□□□□ 0.19
ERCC3-202ENST00000426778 MYO1BO43795 1136 aa16.27■□□□□ 0.19
ERCC3-202ENST00000426778 N4BP1O75113 896 aaKnown RBP16.27■□□□□ 0.19
ERCC3-202ENST00000426778 FILIP1LQ4L180 1135 aa16.27■□□□□ 0.19
ERCC3-202ENST00000426778 ANKZF1Q9H8Y5 726 aa16.27■□□□□ 0.19
ERCC3-202ENST00000426778 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.27■□□□□ 0.19
ERCC3-202ENST00000426778 FAM205AQ6ZU69 1335 aa16.27■□□□□ 0.19
ERCC3-202ENST00000426778 ANKRD36CQ5JPF3 1778 aa16.27■□□□□ 0.19
ERCC3-202ENST00000426778 PHACTR2O75167 634 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 PBX1P40424 430 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 TMTC3Q6ZXV5 915 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 NELFBQ8WX92 580 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 PANX2Q96RD6 677 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 GUCA1BQ9UMX6 200 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 CNTNAP5Q8WYK1 1306 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 KCNQ2O43526 872 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
ERCC3-202ENST00000426778 TXLNAP40222 546 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 PMS1P54277 932 aaKnown RBP16.26■□□□□ 0.19
ERCC3-202ENST00000426778 STAG2Q8N3U4 1231 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 BRMS1Q9HCU9 246 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 HDAC6Q9UBN7 1215 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 DOCK2Q92608 1830 aa16.26■□□□□ 0.19
ERCC3-202ENST00000426778 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms