RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 ZSCAN25Q6NSZ9 544 aa21.37■■□□□ 1.01
GPC1-203ENST00000425056 NBPF3Q9H094 633 aa21.37■■□□□ 1.01
GPC1-203ENST00000425056 AKR1B1P15121 316 aa21.36■■□□□ 1.01
GPC1-203ENST00000425056 PTPREP23469 700 aa21.36■■□□□ 1.01
GPC1-203ENST00000425056 GRB14Q14449 540 aa21.36■■□□□ 1.01
GPC1-203ENST00000425056 AMOTL1Q8IY63 956 aa21.36■■□□□ 1.01
GPC1-203ENST00000425056 LPAR1Q92633 364 aa21.36■■□□□ 1.01
GPC1-203ENST00000425056 CCDC17Q96LX7 622 aa21.36■■□□□ 1.01
GPC1-203ENST00000425056 SZT2Q5T011 3432 aa21.36■■□□□ 1.01
GPC1-203ENST00000425056 GREB1LQ9C091 1923 aaPredicted RBP21.35■■□□□ 1.01
GPC1-203ENST00000425056 USP17L12C9JPN9 530 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 USP17L21D6R901 530 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 SMIM22K7EJ46 135 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 HOXC6P09630 235 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 ICA1Q05084 483 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 COG2Q14746 738 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 KIAA1755Q5JYT7 1200 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 WDR78Q5VTH9 848 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 C16orf86Q6ZW13 317 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 CLEC10AQ8IUN9 316 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 SIAH1Q8IUQ4 282 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 DDRGK1Q96HY6 314 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 TANGO6Q9C0B7 1094 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 PUS7LQ9H0K6 701 aaKnown RBP21.35■■□□□ 1.01
GPC1-203ENST00000425056 C11orf49Q9H6J7 331 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 ARHGEF10LQ9HCE6 1279 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 ECHDC1Q9NTX5 307 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 IVNS1ABPQ9Y6Y0 642 aa21.35■■□□□ 1.01
GPC1-203ENST00000425056 CYP2D7A0A087X1C5 515 aa21.34■■□□□ 1.01
GPC1-203ENST00000425056 CCND3P30281 292 aaPredicted RBP21.34■■□□□ 1.01
GPC1-203ENST00000425056 CDK8P49336 464 aa21.34■■□□□ 1.01
GPC1-203ENST00000425056 LHX8Q68G74 356 aa21.34■■□□□ 1.01
GPC1-203ENST00000425056 SH2D4AQ9H788 454 aa21.34■■□□□ 1.01
GPC1-203ENST00000425056 HOXC10Q9NYD6 342 aa21.34■■□□□ 1.01
GPC1-203ENST00000425056 FLRT1Q9NZU1 646 aa21.34■■□□□ 1.01
GPC1-203ENST00000425056 TMX2Q9Y320 296 aa21.34■■□□□ 1.01
GPC1-203ENST00000425056 SLC4A4Q9Y6R1 1079 aa21.34■■□□□ 1.01
GPC1-203ENST00000425056 PFASO15067 1338 aa21.33■■□□□ 1.01
GPC1-203ENST00000425056 A0A1W2PPC1 479 aa21.33■■□□□ 1.01
GPC1-203ENST00000425056 MOV10L1Q9BXT6 1211 aaKnown RBP21.33■■□□□ 1.01
GPC1-203ENST00000425056 DCTPP1Q9H773 170 aa21.33■■□□□ 1.01
GPC1-203ENST00000425056 VCPKMTQ9H867 229 aa21.33■■□□□ 1.01
GPC1-203ENST00000425056 MFSD14CQ5VZR4 134 aa21.32■■□□□ 1
GPC1-203ENST00000425056 CTR9Q6PD62 1173 aa21.32■■□□□ 1
GPC1-203ENST00000425056 C7orf61Q8IZ16 206 aa21.32■■□□□ 1
GPC1-203ENST00000425056 MB21D1Q8N884 522 aa21.32■■□□□ 1
GPC1-203ENST00000425056 KBTBD3Q8NAB2 608 aa21.32■■□□□ 1
GPC1-203ENST00000425056 SHCBP1Q8NEM2 672 aa21.32■■□□□ 1
GPC1-203ENST00000425056 GPATCH3Q96I76 525 aa21.32■■□□□ 1
GPC1-203ENST00000425056 SPATC1LQ9H0A9 340 aa21.32■■□□□ 1
GPC1-203ENST00000425056 ARPP21Q9UBL0 812 aaPredicted RBP21.32■■□□□ 1
GPC1-203ENST00000425056 LAMA3Q16787 3333 aa21.32■■□□□ 1
GPC1-203ENST00000425056 COL11A1P12107 1806 aaPredicted RBP21.32■■□□□ 1
GPC1-203ENST00000425056 IGHA2P01877 340 aa21.31■■□□□ 1
GPC1-203ENST00000425056 COL6A1P12109 1028 aa21.31■■□□□ 1
GPC1-203ENST00000425056 NPLOC4Q8TAT6 608 aa21.31■■□□□ 1
GPC1-203ENST00000425056 WDR46O15213 610 aaKnown RBP21.3■■□□□ 1
GPC1-203ENST00000425056 DSG3P32926 999 aa21.3■■□□□ 1
GPC1-203ENST00000425056 SPICE1Q8N0Z3 855 aa21.3■■□□□ 1
GPC1-203ENST00000425056 STRBPQ96SI9 672 aaKnown RBP21.3■■□□□ 1
GPC1-203ENST00000425056 ROBO3Q96MS0 1386 aa21.29■■□□□ 1
GPC1-203ENST00000425056 STRNO43815 780 aa21.29■■□□□ 1
GPC1-203ENST00000425056 FLOT1O75955 427 aa21.29■■□□□ 1
GPC1-203ENST00000425056 ADORA2AP29274 412 aa21.29■■□□□ 1
GPC1-203ENST00000425056 ATP2B2Q01814 1243 aa21.29■■□□□ 1
GPC1-203ENST00000425056 APPBP2Q92624 585 aa21.29■■□□□ 1
GPC1-203ENST00000425056 KANSL2Q9H9L4 492 aa21.29■■□□□ 1
GPC1-203ENST00000425056 EEF2P13639 858 aaKnown RBP21.28■■□□□ 1
GPC1-203ENST00000425056 ERCC3P19447 782 aa21.28■■□□□ 1
GPC1-203ENST00000425056 SBK1Q52WX2 424 aa21.28■■□□□ 1
GPC1-203ENST00000425056 TSHZ3Q63HK5 1081 aa21.28■■□□□ 1
GPC1-203ENST00000425056 GIMAP6Q6P9H5 292 aa21.28■■□□□ 1
GPC1-203ENST00000425056 ATG4CQ96DT6 458 aa21.28■■□□□ 1
GPC1-203ENST00000425056 GDF15Q99988 308 aa21.28■■□□□ 1
GPC1-203ENST00000425056 STAP2Q9UGK3 403 aa21.28■■□□□ 1
GPC1-203ENST00000425056 GSG1L2A8MUP6 293 aa21.27■■□□□ 1
GPC1-203ENST00000425056 MSCO60682 206 aa21.27■■□□□ 1
GPC1-203ENST00000425056 CYBAP13498 195 aa21.27■■□□□ 1
GPC1-203ENST00000425056 CYP2C19P33261 490 aa21.27■■□□□ 1
GPC1-203ENST00000425056 OLFML2BQ68BL8 750 aa21.27■■□□□ 1
GPC1-203ENST00000425056 ABRAQ8N0Z2 381 aa21.27■■□□□ 1
GPC1-203ENST00000425056 OSBP2Q969R2 916 aa21.27■■□□□ 1
GPC1-203ENST00000425056 MROH8Q9H579 483 aa21.27■■□□□ 1
GPC1-203ENST00000425056 DDX20Q9UHI6 824 aaKnown RBP21.27■■□□□ 1
GPC1-203ENST00000425056 ZMYND8Q9ULU4 1186 aaPredicted RBP21.27■■□□□ 1
GPC1-203ENST00000425056 DNAH12Q6ZR08 3092 aa21.27■□□□□ 0.99
GPC1-203ENST00000425056 ZFYP08048 801 aaPredicted RBP21.26■□□□□ 0.99
GPC1-203ENST00000425056 BMP8BP34820 402 aa21.26■□□□□ 0.99
GPC1-203ENST00000425056 DPP9Q86TI2 863 aa21.26■□□□□ 0.99
GPC1-203ENST00000425056 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.26■□□□□ 0.99
GPC1-203ENST00000425056 GOPCQ9HD26 462 aa21.26■□□□□ 0.99
GPC1-203ENST00000425056 ADAMTS5Q9UNA0 930 aa21.26■□□□□ 0.99
GPC1-203ENST00000425056 RNF113AO15541 343 aaKnown RBP21.25■□□□□ 0.99
GPC1-203ENST00000425056 RASA1P20936 1047 aa21.25■□□□□ 0.99
GPC1-203ENST00000425056 PLS1Q14651 629 aa21.25■□□□□ 0.99
GPC1-203ENST00000425056 TRPV1Q8NER1 839 aa21.25■□□□□ 0.99
GPC1-203ENST00000425056 EPB41L4AQ9HCS5 686 aaPredicted RBP21.25■□□□□ 0.99
GPC1-203ENST00000425056 ZNFX1Q9P2E3 1918 aaKnown RBP21.25■□□□□ 0.99
GPC1-203ENST00000425056 TTC41PQ6P2S7 1318 aa21.25■□□□□ 0.99
GPC1-203ENST00000425056 GPAA1O43292 621 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms