RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ATP1A2P50993 1020 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 IRAK1P51617 712 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 CDKAL1Q5VV42 579 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 KCTD16Q68DU8 428 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 IFNL2Q8IZJ0 200 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 ANKRD20A12PQ8NF67 263 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 TMEM87BQ96K49 555 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 NCAPGQ9BPX3 1015 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 MARF1Q9Y4F3 1742 aaKnown RBP18.73■□□□□ 0.59
PKP4-204ENST00000421462 KCNJ18B7U540 433 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 KCNJ12Q14500 433 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 CHRNA2Q15822 529 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 WDR93Q6P2C0 686 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 ARMT1Q9H993 441 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 BRMS1Q9HCU9 246 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 SMARCAL1Q9NZC9 954 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 LMO7Q8WWI1 1683 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 SNAP23O00161 211 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 PRKAB2O43741 272 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 DNA2P51530 1060 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 LDHAL6AQ6ZMR3 332 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 HDAC7Q8WUI4 952 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 WASF1Q92558 559 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 STRN4Q9NRL3 753 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 CNNM1Q9NRU3 951 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 GDAQ9Y2T3 454 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 PDE2AO00408 941 aaPredicted RBP18.72■□□□□ 0.59
PKP4-204ENST00000421462 IDEP14735 1019 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 ADD2P35612 726 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 EIF5P55010 431 aaKnown RBP18.72■□□□□ 0.59
PKP4-204ENST00000421462 SMCR8Q8TEV9 937 aaPredicted RBP18.72■□□□□ 0.59
PKP4-204ENST00000421462 PLIN2Q99541 437 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 GEMIN8Q9NWZ8 242 aaKnown RBP18.72■□□□□ 0.59
PKP4-204ENST00000421462 CEP131Q9UPN4 1083 aa18.72■□□□□ 0.59
PKP4-204ENST00000421462 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
PKP4-204ENST00000421462 GPTP24298 496 aa18.71■□□□□ 0.59
PKP4-204ENST00000421462 CXCR5P32302 372 aa18.71■□□□□ 0.59
PKP4-204ENST00000421462 WTAPQ15007 396 aa18.71■□□□□ 0.59
PKP4-204ENST00000421462 TTF1Q15361 905 aaPredicted RBP18.71■□□□□ 0.59
PKP4-204ENST00000421462 TRAPPC11Q7Z392 1133 aa18.71■□□□□ 0.59
PKP4-204ENST00000421462 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
PKP4-204ENST00000421462 CAPS2Q9BXY5 557 aa18.71■□□□□ 0.59
PKP4-204ENST00000421462 AGPSO00116 658 aa18.71■□□□□ 0.59
PKP4-204ENST00000421462 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
PKP4-204ENST00000421462 MCTP2Q6DN12 878 aa18.71■□□□□ 0.59
PKP4-204ENST00000421462 FAM107BQ9H098 131 aa18.71■□□□□ 0.59
PKP4-204ENST00000421462 SHTN1A0MZ66 631 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 ERICH2A1L162 156 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 MBD4O95243 580 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 TDO2P48775 406 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 MFSD6Q6ZSS7 791 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 RASSF8Q8NHQ8 419 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 LACRTQ9GZZ8 138 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 YY1AP1Q9H869 796 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 LUC7L2Q9Y383 392 aaKnown RBP18.7■□□□□ 0.58
PKP4-204ENST00000421462 TACC3Q9Y6A5 838 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 C5P01031 1676 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 CYP27B1O15528 508 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 IFNAR1P17181 557 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 TUBB4BP68371 445 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 CABLES1Q8TDN4 633 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 CAPN7Q9Y6W3 813 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 MINDY4BA8MYZ0 360 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 PDE6AP16499 860 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 INPP5BP32019 993 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 PDCLQ13371 301 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 CCDC51Q96ER9 411 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 EHD2Q9NZN4 543 aa18.7■□□□□ 0.58
PKP4-204ENST00000421462 HNRNPH1P31943 449 aaKnown RBP18.69■□□□□ 0.58
PKP4-204ENST00000421462 PHKA1P46020 1223 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 ANKRD18AQ8IVF6 992 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 SH2D3CQ8N5H7 860 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 MAGEB6Q8N7X4 407 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 FOXP1Q9H334 677 aaPredicted RBP18.69■□□□□ 0.58
PKP4-204ENST00000421462 TBC1D2BQ9UPU7 963 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 RCCD1A6NED2 376 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 TUBBP07437 444 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 PAK1Q13153 545 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 TCP11X2Q5H9J9 407 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 MIGA1Q8NAN2 632 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 RUFY1Q96T51 708 aa18.69■□□□□ 0.58
PKP4-204ENST00000421462 SMIM22K7EJ46 135 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 IPO7O95373 1038 aaKnown RBP18.68■□□□□ 0.58
PKP4-204ENST00000421462 HERVK_113P62684 666 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 IFNL3Q8IZI9 196 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 THEMISQ8N1K5 641 aaPredicted RBP18.68■□□□□ 0.58
PKP4-204ENST00000421462 OR8K1Q8NGG5 319 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 SPATA20Q8TB22 786 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 MYO1FO00160 1098 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 DEXIO95424 95 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 ERCC3P19447 782 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 AARSP49588 968 aaKnown RBP eCLIP18.68■□□□□ 0.58
PKP4-204ENST00000421462 CRACR2BQ8N4Y2 399 aaPredicted RBP18.68■□□□□ 0.58
PKP4-204ENST00000421462 CENPHQ9H3R5 247 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 DMGDHQ9UI17 866 aaKnown RBP18.68■□□□□ 0.58
PKP4-204ENST00000421462 NDUFAB1O14561 156 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 KLK7P49862 253 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 TCIRG1Q13488 830 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 CCNI2Q6ZMN8 369 aaPredicted RBP18.68■□□□□ 0.58
PKP4-204ENST00000421462 VIPAS39Q9H9C1 493 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms