RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 DCP1AQ9NPI6 582 aaPredicted RBP20.42■□□□□ 0.86
UPF3AP3-201ENST00000420996 ZNF532Q9HCE3 1301 aa20.42■□□□□ 0.86
UPF3AP3-201ENST00000420996 MYH8P13535 1937 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 TCRBV5S4A2TA0A5A2 114 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 DNM1LO00429 736 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 CYBAP13498 195 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 EVX2Q03828 476 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 OLFML2BQ68BL8 750 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 TMEM179Q6ZVK1 233 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 CLASRPQ8N2M8 674 aaKnown RBP20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 PANK1Q8TE04 598 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 TANGO6Q9C0B7 1094 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 SPATC1LQ9H0A9 340 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 A0A0G2JMZ2 1700 aa20.41■□□□□ 0.86
UPF3AP3-201ENST00000420996 GOLIM4O00461 696 aa20.4■□□□□ 0.86
UPF3AP3-201ENST00000420996 ADORA2AP29274 412 aa20.4■□□□□ 0.86
UPF3AP3-201ENST00000420996 MB21D1Q8N884 522 aa20.4■□□□□ 0.86
UPF3AP3-201ENST00000420996 SDR42E1Q8WUS8 393 aa20.4■□□□□ 0.86
UPF3AP3-201ENST00000420996 KIF1BPQ96EK5 621 aa20.4■□□□□ 0.86
UPF3AP3-201ENST00000420996 LBHD1Q9BQE6 289 aaPredicted RBP20.4■□□□□ 0.86
UPF3AP3-201ENST00000420996 SWAP70Q9UH65 585 aa20.4■□□□□ 0.86
UPF3AP3-201ENST00000420996 ATN1P54259 1190 aaPredicted RBP20.39■□□□□ 0.85
UPF3AP3-201ENST00000420996 LCORLQ8N3X6 602 aa20.39■□□□□ 0.85
UPF3AP3-201ENST00000420996 ARRDC4Q8NCT1 418 aa20.39■□□□□ 0.85
UPF3AP3-201ENST00000420996 DNAJC2Q99543 621 aaKnown RBP20.39■□□□□ 0.85
UPF3AP3-201ENST00000420996 COBLO75128 1261 aa20.38■□□□□ 0.85
UPF3AP3-201ENST00000420996 IFIT2P09913 472 aaKnown RBP20.38■□□□□ 0.85
UPF3AP3-201ENST00000420996 CYP2D6P10635 497 aa20.38■□□□□ 0.85
UPF3AP3-201ENST00000420996 ERCC3P19447 782 aa20.38■□□□□ 0.85
UPF3AP3-201ENST00000420996 KIAA1755Q5JYT7 1200 aa20.38■□□□□ 0.85
UPF3AP3-201ENST00000420996 SLC44A5Q8NCS7 719 aa20.38■□□□□ 0.85
UPF3AP3-201ENST00000420996 MROH8Q9H579 483 aa20.38■□□□□ 0.85
UPF3AP3-201ENST00000420996 SLC5A4Q9NY91 659 aa20.38■□□□□ 0.85
UPF3AP3-201ENST00000420996 ZNFX1Q9P2E3 1918 aaKnown RBP20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 DSG3P32926 999 aa20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 RTP1P59025 263 aa20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 GJC2Q5T442 439 aaPredicted RBP20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 FAM109BQ6ICB4 259 aaPredicted RBP20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 SIAH1Q8IUQ4 282 aa20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 RPAP2Q8IXW5 612 aaPredicted RBP20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 ABRAQ8N0Z2 381 aa20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 SH2D4AQ9H788 454 aa20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 ARHGEF10LQ9HCE6 1279 aa20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 ATP8A2Q9NTI2 1148 aa20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 PRKAG2Q9UGJ0 569 aa20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 TMX2Q9Y320 296 aa20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 BAZ2AQ9UIF9 1905 aaKnown RBP20.37■□□□□ 0.85
UPF3AP3-201ENST00000420996 POTEB2H3BUK9 544 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 APBB1O00213 710 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 SEPT4O43236 478 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 HMMRO75330 724 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 FLOT1O75955 427 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 MS4A1P11836 297 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 DYNLL2Q96FJ2 89 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 ARMT1Q9H993 441 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 DNAH12Q6ZR08 3092 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 PARP14Q460N5 1801 aa20.36■□□□□ 0.85
UPF3AP3-201ENST00000420996 LTBP2Q14767 1821 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 KBTBD13C9JR72 458 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 AKR1B1P15121 316 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 ICA1Q05084 483 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 PLS1Q14651 629 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 SLC39A5Q6ZMH5 540 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 NCAPG2Q86XI2 1143 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 CCDC17Q96LX7 622 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 VCPKMTQ9H867 229 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 PAG1Q9NWQ8 432 aa20.35■□□□□ 0.85
UPF3AP3-201ENST00000420996 RAB11FIP3O75154 756 aa20.34■□□□□ 0.85
UPF3AP3-201ENST00000420996 MBD4O95243 580 aa20.34■□□□□ 0.85
UPF3AP3-201ENST00000420996 ADD2P35612 726 aa20.34■□□□□ 0.85
UPF3AP3-201ENST00000420996 ANO1Q5XXA6 986 aa20.34■□□□□ 0.85
UPF3AP3-201ENST00000420996 SPICE1Q8N0Z3 855 aa20.34■□□□□ 0.85
UPF3AP3-201ENST00000420996 ATG4CQ96DT6 458 aa20.34■□□□□ 0.85
UPF3AP3-201ENST00000420996 ATP11BQ9Y2G3 1177 aa20.34■□□□□ 0.85
UPF3AP3-201ENST00000420996 COL11A1P12107 1806 aaPredicted RBP20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 WDR46O15213 610 aaKnown RBP20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 PRKAB2O43741 272 aa20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 SLC25A27O95847 323 aa20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 FCER1AP12319 257 aa20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 ATP5JP18859 108 aa20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 CDK8P49336 464 aa20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 C12orf60Q5U649 245 aa20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 CLEC10AQ8IUN9 316 aa20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 SIRT2Q8IXJ6 389 aa20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 MAML3Q96JK9 1138 aa20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.33■□□□□ 0.85
UPF3AP3-201ENST00000420996 MYH7P12883 1935 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 TMEM132BQ14DG7 1078 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 SLFNL1Q499Z3 407 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 PRAMEF19Q5SWL8 479 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 AMOTL1Q8IY63 956 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 BCL11AQ9H165 835 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 BOLA2Q9H3K6 86 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 ZBTB40Q9NUA8 1239 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 ADAMTS5Q9UNA0 930 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 SMCHD1A6NHR9 2005 aa20.32■□□□□ 0.84
UPF3AP3-201ENST00000420996 USP17L12C9JPN9 530 aa20.31■□□□□ 0.84
UPF3AP3-201ENST00000420996 USP17L21D6R901 530 aa20.31■□□□□ 0.84
UPF3AP3-201ENST00000420996 SNX17Q15036 470 aa20.31■□□□□ 0.84
UPF3AP3-201ENST00000420996 LRRC41Q15345 812 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms