RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 C19orf81C9J6K1 198 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 HSPA6P17066 643 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 RASAL3Q86YV0 1011 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 ZKSCAN3Q9BRR0 538 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 KCNH4Q9UQ05 1017 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 USP17L10C9JJH3 530 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 IRF6O14896 467 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 SLC10A3P09131 477 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 TOP1P11387 765 aaKnown RBP16.97■□□□□ 0.31
SGCE-202ENST00000415788 USP14P54578 494 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 SPP2Q13103 211 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 DEFB115Q30KQ5 88 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 SPRYD7Q5W111 196 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 CHST3Q7LGC8 479 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 FBXL16Q8N461 479 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 ENAHQ8N8S7 591 aaPredicted RBP16.97■□□□□ 0.31
SGCE-202ENST00000415788 FEZ1Q99689 392 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 KIAA1683Q9H0B3 1180 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 CLIP2Q9UDT6 1046 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 TMX2Q9Y320 296 aa16.97■□□□□ 0.31
SGCE-202ENST00000415788 K7ELQ4 463 aaPredicted RBP16.96■□□□□ 0.31
SGCE-202ENST00000415788 LIFRP42702 1097 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 ECE1P42892 770 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 BACE1P56817 501 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 ATP2B2Q01814 1243 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 WTAPQ15007 396 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 SEC23AQ15436 765 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 IFIT1BQ5T764 474 aaKnown RBP16.96■□□□□ 0.31
SGCE-202ENST00000415788 RCSD1Q6JBY9 416 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 CCDC84Q86UT8 332 aaPredicted RBP16.96■□□□□ 0.31
SGCE-202ENST00000415788 CLEC10AQ8IUN9 316 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 SIAH1Q8IUQ4 282 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 PPP1R9BQ96SB3 815 aa16.96■□□□□ 0.31
SGCE-202ENST00000415788 UPF3BQ9BZI7 483 aaKnown RBP16.96■□□□□ 0.31
SGCE-202ENST00000415788 ATAD5Q96QE3 1844 aa16.96■□□□□ 0.3
SGCE-202ENST00000415788 TRIM75PA6NK02 468 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 FGD1P98174 961 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 SNAPC2Q13487 334 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 KIF2CQ99661 725 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 GOPCQ9HD26 462 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 A0A1W2PRG0 241 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 SH2B2O14492 632 aaPredicted RBP16.95■□□□□ 0.3
SGCE-202ENST00000415788 GJA5P36382 358 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 GTF2A2P52657 109 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 MTMR2Q13614 643 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 COL9A3Q14050 684 aaPredicted RBP16.95■□□□□ 0.3
SGCE-202ENST00000415788 RABEP1Q15276 862 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 SH3D19Q5HYK7 790 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 PAXIP1Q6ZW49 1069 aaPredicted RBP16.95■□□□□ 0.3
SGCE-202ENST00000415788 ACER1Q8TDN7 264 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 LPAR1Q92633 364 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
SGCE-202ENST00000415788 KAT14Q9H8E8 782 aa16.95■□□□□ 0.3
SGCE-202ENST00000415788 CPA1P15085 419 aa16.94■□□□□ 0.3
SGCE-202ENST00000415788 USP17L2Q6R6M4 530 aa16.94■□□□□ 0.3
SGCE-202ENST00000415788 GMCL1P1Q8NEA9 526 aa16.94■□□□□ 0.3
SGCE-202ENST00000415788 TMEM47Q9BQJ4 181 aa16.94■□□□□ 0.3
SGCE-202ENST00000415788 VCPKMTQ9H867 229 aa16.94■□□□□ 0.3
SGCE-202ENST00000415788 LY9Q9HBG7 655 aa16.94■□□□□ 0.3
SGCE-202ENST00000415788 PDRG1Q9NUG6 133 aa16.94■□□□□ 0.3
SGCE-202ENST00000415788 A0A0G2JLL6 359 aaPredicted RBP16.93■□□□□ 0.3
SGCE-202ENST00000415788 FAM155AB1AL88 458 aaPredicted RBP16.93■□□□□ 0.3
SGCE-202ENST00000415788 NOGQ13253 232 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 PRRT2Q7Z6L0 340 aaPredicted RBP16.93■□□□□ 0.3
SGCE-202ENST00000415788 GAS2L3Q86XJ1 694 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 C12orf42Q96LP6 360 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 AGXT2Q9BYV1 514 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 ALDH8A1Q9H2A2 487 aaPredicted RBP16.93■□□□□ 0.3
SGCE-202ENST00000415788 TMOD4Q9NZQ9 345 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 MANSC4A6NHS7 340 aaPredicted RBP16.93■□□□□ 0.3
SGCE-202ENST00000415788 CETPP11597 493 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 NEK4P51957 841 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 ANKRD1Q15327 319 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
SGCE-202ENST00000415788 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 LRRC47Q8N1G4 583 aaKnown RBP16.93■□□□□ 0.3
SGCE-202ENST00000415788 PROCA1Q8NCQ7 364 aaPredicted RBP16.93■□□□□ 0.3
SGCE-202ENST00000415788 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 LRRC2Q9BYS8 371 aa16.93■□□□□ 0.3
SGCE-202ENST00000415788 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 TERF1P54274 439 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 HMGCS2P54868 508 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 INHBEP58166 350 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 KLHL40Q2TBA0 621 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 CYP4F22Q6NT55 531 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 Q6ZUG5 572 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 PNMA1Q8ND90 353 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
SGCE-202ENST00000415788 F5H6K3 240 aa16.91■□□□□ 0.3
SGCE-202ENST00000415788 KLRC3Q07444 240 aa16.91■□□□□ 0.3
SGCE-202ENST00000415788 CATIPQ7Z7H3 387 aa16.91■□□□□ 0.3
SGCE-202ENST00000415788 REM2Q8IYK8 340 aaPredicted RBP16.91■□□□□ 0.3
SGCE-202ENST00000415788 MS4A4AQ96JQ5 239 aa16.91■□□□□ 0.3
SGCE-202ENST00000415788 EMILIN3Q9NT22 766 aa16.91■□□□□ 0.3
SGCE-202ENST00000415788 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms