RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 MX1P20591 662 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 MAPK4P31152 587 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 CCL14Q16627 93 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 PLEKHH3Q7Z736 793 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 DPF3Q92784 378 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 FSD1Q9BTV5 496 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.05□□□□□ -0.484e-7■■□□□ 14.3
PKP4-203ENST00000411900 ARHGEF10LQ9HCE6 1279 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 EPB41L4AQ9HCS5 686 aaPredicted RBP12.05□□□□□ -0.48
PKP4-203ENST00000411900 ARPP21Q9UBL0 812 aaPredicted RBP12.05□□□□□ -0.48
PKP4-203ENST00000411900 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
PKP4-203ENST00000411900 MYH4Q9Y623 1939 aa12.04□□□□□ -0.48
PKP4-203ENST00000411900 A0A0G2JMZ2 1700 aa12.04□□□□□ -0.48
PKP4-203ENST00000411900 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
PKP4-203ENST00000411900 EEF2P13639 858 aaKnown RBP12.04□□□□□ -0.48
PKP4-203ENST00000411900 TDO2P48775 406 aa12.04□□□□□ -0.48
PKP4-203ENST00000411900 SOCS4Q8WXH5 440 aa12.04□□□□□ -0.48
PKP4-203ENST00000411900 CCDC17Q96LX7 622 aa12.04□□□□□ -0.48
PKP4-203ENST00000411900 PAK6Q9NQU5 681 aaPredicted RBP12.04□□□□□ -0.48
PKP4-203ENST00000411900 TMX2Q9Y320 296 aa12.04□□□□□ -0.48
PKP4-203ENST00000411900 GREB1LQ9C091 1923 aaPredicted RBP12.03□□□□□ -0.48
PKP4-203ENST00000411900 H0YGN5 161 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 PRDM1O75626 825 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 FLOT1O75955 427 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 NEFLP07196 543 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 ZFYP08048 801 aaPredicted RBP12.03□□□□□ -0.48
PKP4-203ENST00000411900 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
PKP4-203ENST00000411900 ZKSCAN1P17029 563 aaPredicted RBP12.03□□□□□ -0.48
PKP4-203ENST00000411900 RGS2P41220 211 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 CCNA1P78396 465 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 COG2Q14746 738 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 MORN1Q5T089 497 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 CCDC129Q6ZRS4 1044 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
PKP4-203ENST00000411900 VCPKMTQ9H867 229 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 MKNK2Q9HBH9 465 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 HMX1Q9NP08 348 aaPredicted RBP12.03□□□□□ -0.48
PKP4-203ENST00000411900 ALPK3Q96L96 1907 aa12.03□□□□□ -0.48
PKP4-203ENST00000411900 RASA1P20936 1047 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 PTPREP23469 700 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 MAP2K5Q13163 448 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 PLS1Q14651 629 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 SBK1Q52WX2 424 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 LBX2Q6XYB7 198 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 USP6NLQ92738 828 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 ATG4CQ96DT6 458 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 APBA2Q99767 749 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
PKP4-203ENST00000411900 SH2D4AQ9H788 454 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 HOXC10Q9NYD6 342 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 RPTORQ8N122 1335 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 SALL3Q9BXA9 1300 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 FRMPD3Q5JV73 1810 aa12.02□□□□□ -0.49
PKP4-203ENST00000411900 ZNFX1Q9P2E3 1918 aaKnown RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 PATL2C9JE40 543 aaKnown RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 SLC34A2O95436 690 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 XRCC5P13010 732 aaKnown RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 GNAT2P19087 354 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 CCND3P30281 292 aaPredicted RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 DSG3P32926 999 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 CACNB2Q08289 660 aaPredicted RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 HDAC1Q13547 482 aaPredicted RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 LRRFIP1Q32MZ4 808 aaKnown RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 B4GALNT3Q6L9W6 998 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 GIMAP6Q6P9H5 292 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 IFNL3Q8IZI9 196 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 LPAR1Q92633 364 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 GCC1Q96CN9 775 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 PAWRQ96IZ0 340 aaKnown RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 NUP88Q99567 741 aaPredicted RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 HTATIP2Q9BUP3 242 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 MOV10L1Q9BXT6 1211 aaKnown RBP12.01□□□□□ -0.49
PKP4-203ENST00000411900 LNPKQ9C0E8 428 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 CRISPLD2Q9H0B8 497 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 KANSL2Q9H9L4 492 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 FBXO28Q9NVF7 368 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 FLRT1Q9NZU1 646 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 IVNS1ABPQ9Y6Y0 642 aa12.01□□□□□ -0.49
PKP4-203ENST00000411900 SLC15A5A6NIM6 579 aa12□□□□□ -0.49
PKP4-203ENST00000411900 WDR46O15213 610 aaKnown RBP12□□□□□ -0.49
PKP4-203ENST00000411900 ERCC3P19447 782 aa12□□□□□ -0.49
PKP4-203ENST00000411900 ZMYM1Q5SVZ6 1142 aa12□□□□□ -0.49
PKP4-203ENST00000411900 FAM83BQ5T0W9 1011 aa12□□□□□ -0.49
PKP4-203ENST00000411900 MAP3K21Q5TCX8 1036 aa12□□□□□ -0.49
PKP4-203ENST00000411900 NCAPG2Q86XI2 1143 aa12□□□□□ -0.49
PKP4-203ENST00000411900 EXOC6Q8TAG9 804 aa12□□□□□ -0.49
PKP4-203ENST00000411900 NPLOC4Q8TAT6 608 aa12□□□□□ -0.49
PKP4-203ENST00000411900 SPATC1LQ9H0A9 340 aa12□□□□□ -0.49
PKP4-203ENST00000411900 NAPBQ9H115 298 aa12□□□□□ -0.49
PKP4-203ENST00000411900 GOPCQ9HD26 462 aa12□□□□□ -0.49
PKP4-203ENST00000411900 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
PKP4-203ENST00000411900 PDE1AP54750 535 aa11.99□□□□□ -0.49
PKP4-203ENST00000411900 GRB14Q14449 540 aa11.99□□□□□ -0.49
PKP4-203ENST00000411900 TMEM132BQ14DG7 1078 aa11.99□□□□□ -0.49
PKP4-203ENST00000411900 HABP4Q5JVS0 413 aaKnown RBP11.99□□□□□ -0.49
PKP4-203ENST00000411900 DPP9Q86TI2 863 aa11.99□□□□□ -0.49
PKP4-203ENST00000411900 TRMT44Q8IYL2 757 aaKnown RBP11.99□□□□□ -0.49
PKP4-203ENST00000411900 ZNF444Q8N0Y2 327 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms