RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 MAP3K13O43283 966 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 PEX1O43933 1283 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 CLTAP09496 248 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 CYP2C19P33261 490 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 GCLCP48506 637 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF75DP51815 510 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ARL4CP56559 192 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 MMRN1Q13201 1228 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 TTC23Q5W5X9 447 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ZKSCAN2Q63HK3 967 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 OTUD6AQ7L8S5 288 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 UNC45BQ8IWX7 931 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 LEO1Q8WVC0 666 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 MRPS27Q92552 414 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 FAM192AQ9GZU8 254 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 H2AFY2Q9P0M6 372 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 SYCE1LA8MT33 242 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 GOLGA8MH3BSY2 632 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 CHP2O43745 196 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ATP5HO75947 161 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 EEF1B2P24534 225 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 COPB2P35606 906 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 YWHAEP62258 255 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 TRAP1Q12931 704 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 SLC30A9Q6PML9 568 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 TEX11Q8IYF3 940 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 TMTC2Q8N394 836 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ZGPATQ8N5A5 531 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 TMEM87BQ96K49 555 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 RILPQ96NA2 401 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ABT1Q9ULW3 272 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 PPP6R1Q9UPN7 881 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 SNX5Q9Y5X3 404 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 LOC105371045A0A1W2PR82 267 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 DYTNA2CJ06 578 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ADCY3O60266 1144 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 NBPF7P0C2Y1 421 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 GJA1P17302 382 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 DDIT3P35638 169 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 CAV3P56539 151 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 RAB2AP61019 212 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 DAB2P98082 770 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 NCAPH2Q6IBW4 605 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 EXD1Q8NHP7 514 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 MBIPQ9NS73 344 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 SYBUQ9NX95 663 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 SPEF1Q9Y4P9 236 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ZBBXA8MT70 800 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 APAF1O14727 1248 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 KRT32Q14532 448 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 CHERPQ8IWX8 916 aaKnown RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 SPDYE1Q8NFV5 336 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 ZFYVE19Q96K21 471 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 SH3GL1Q99961 368 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 ZBED9Q6R2W3 1325 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 ELF1P32519 619 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 RCN2Q14257 317 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 PDCD4Q53EL6 469 aaKnown RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TRMT10CQ7L0Y3 403 aaKnown RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 UBLCP1Q8WVY7 318 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TUBB6Q9BUF5 446 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TRIM39Q9HCM9 518 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TRPC7Q9HCX4 862 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 CHRAC1Q9NRG0 131 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TCP11L1Q9NUJ3 509 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 IRAK4Q9NWZ3 460 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 GALNT8Q9NY28 637 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 MRFAP1Q9Y605 127 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TRIM75PA6NK02 468 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 GOLGA8KD6RF30 607 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 GOLGA8HP0CJ92 632 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 MKRN3Q13064 507 aaKnown RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TERF2Q15554 542 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 ATP13A5Q4VNC0 1218 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 KIF1BPQ96EK5 621 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 FAM129BQ96TA1 746 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 MTRQ99707 1265 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TRPC4Q9UBN4 977 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 NBPF26B4DH59 902 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF197O14709 1029 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 HNRNPRO43390 633 aaKnown RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 ARF4P18085 180 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 PPARGP37231 505 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 LIG3P49916 1009 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 DNA2P51530 1060 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 DNAJC3Q13217 504 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 MTMR3Q13615 1198 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TUBB2AQ13885 445 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 NBPF9Q3BBW0 867 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 KRBA2Q6ZNG9 492 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 RASSF6Q6ZTQ3 369 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 SHCBP1Q8NEM2 672 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 PPP1R14AQ96A00 147 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TUBB2BQ9BVA1 445 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 CAPN11Q9UMQ6 739 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 SNUPNO95149 360 aaKnown RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 MYL1P05976 194 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 BMP2KLQ5H9B9 411 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TTC39AQ5SRH9 613 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms