RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.23■□□□□ 0.837e-7■■■■□ 22.9
COL18A1-204ENST00000400337 FAM207AQ9NSI2 230 aaPredicted RBP20.23■□□□□ 0.83
COL18A1-204ENST00000400337 KIAA0825Q8IV33 1275 aa20.23■□□□□ 0.83
COL18A1-204ENST00000400337 GPKOWQ92917 476 aaPredicted RBP eCLIP20.23■□□□□ 0.833e-6■■■■□ 20.9
COL18A1-204ENST00000400337 MNAT1P51948 309 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 ZMYM1Q5SVZ6 1142 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 CPLX4Q7Z7G2 160 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 CCDC84Q86UT8 332 aaPredicted RBP20.22■□□□□ 0.83
COL18A1-204ENST00000400337 MED23Q9ULK4 1368 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 ZNF853P0CG23 659 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 SCG2P13521 617 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 TECP42680 631 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 ZBTB16Q05516 673 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 KLHL30Q0D2K2 578 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 APBB1IPQ7Z5R6 666 aaPredicted RBP20.22■□□□□ 0.83
COL18A1-204ENST00000400337 HOOK2Q96ED9 719 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 TTC37Q6PGP7 1564 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 ATP2A2P16615 1042 aaKnown RBP20.22■□□□□ 0.83
COL18A1-204ENST00000400337 SERPINA10Q9UK55 444 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 PCDHA7Q9UN72 937 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 IGSF3O75054 1194 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 ADKP55263 362 aaKnown RBP20.22■□□□□ 0.83
COL18A1-204ENST00000400337 FAM76AQ8TAV0 307 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 PSMB7Q99436 277 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 GPR108Q9NPR9 543 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 TXNDC16Q9P2K2 825 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 AGTPBP1Q9UPW5 1226 aa20.22■□□□□ 0.83
COL18A1-204ENST00000400337 TUBB2AQ13885 445 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 TUBB2BQ9BVA1 445 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 IL6STP40189 918 aaPredicted RBP20.21■□□□□ 0.83
COL18A1-204ENST00000400337 ZNF589Q86UQ0 364 aaPredicted RBP20.21■□□□□ 0.83
COL18A1-204ENST00000400337 PSTPIP2Q9H939 334 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 IVNS1ABPQ9Y6Y0 642 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 ZNF804BA4D1E1 1349 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 EBAG9O00559 213 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 CMA1P23946 247 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 CLIC6Q96NY7 704 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 CTTNBP2NLQ9P2B4 639 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 CYP21A2P08686 494 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 CEP63Q96MT8 703 aa20.21■□□□□ 0.83
COL18A1-204ENST00000400337 ZNF827Q17R98 1081 aa20.2■□□□□ 0.83
COL18A1-204ENST00000400337 CHURC1Q8WUH1 139 aa20.2■□□□□ 0.83
COL18A1-204ENST00000400337 NLRC4Q9NPP4 1024 aa20.2■□□□□ 0.83
COL18A1-204ENST00000400337 OGFRQ9NZT2 677 aa20.2■□□□□ 0.83
COL18A1-204ENST00000400337 GAS7O60861 476 aa20.2■□□□□ 0.82
COL18A1-204ENST00000400337 IPO4Q8TEX9 1081 aaKnown RBP20.2■□□□□ 0.82
COL18A1-204ENST00000400337 LIN9Q5TKA1 542 aa20.2■□□□□ 0.82
COL18A1-204ENST00000400337 GPT2Q8TD30 523 aa20.2■□□□□ 0.82
COL18A1-204ENST00000400337 AZI2Q9H6S1 392 aa20.2■□□□□ 0.82
COL18A1-204ENST00000400337 ELF2Q15723 593 aa20.2■□□□□ 0.82
COL18A1-204ENST00000400337 RRAGAQ7L523 313 aa20.2■□□□□ 0.82
COL18A1-204ENST00000400337 ANTXR1Q9H6X2 564 aa20.2■□□□□ 0.82
COL18A1-204ENST00000400337 SFMBT2Q5VUG0 894 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 CCDC121Q6ZUS5 278 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 RDH13Q8NBN7 331 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 CLIC4Q9Y696 253 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 UBL4BQ8N7F7 174 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 FBXO18Q8NFZ0 1043 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 ERBB3P21860 1342 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 PRR16Q569H4 304 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 TYW1BQ6NUM6 668 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 PCDHB13Q9Y5F0 798 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 GPBP1Q86WP2 473 aa20.19■□□□□ 0.82
COL18A1-204ENST00000400337 CEP104O60308 925 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 DDAH1O94760 285 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 CCDC6Q16204 474 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 TRIM31Q9BZY9 425 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 SEC31BQ9NQW1 1179 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 FLOT1O75955 427 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 ERCC5P28715 1186 aaPredicted RBP20.18■□□□□ 0.82
COL18A1-204ENST00000400337 NDUFA8P51970 172 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 NEK8Q86SG6 692 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 PCDHA12Q9UN75 941 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 FAM169AQ9Y6X4 670 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 NPHP4O75161 1426 aaPredicted RBP20.18■□□□□ 0.82
COL18A1-204ENST00000400337 CERKLQ49MI3 558 aaPredicted RBP20.18■□□□□ 0.82
COL18A1-204ENST00000400337 KRBA2Q6ZNG9 492 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 CSRNP2Q9H175 543 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 KDM3AQ9Y4C1 1321 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 M0R2C6 588 aa20.18■□□□□ 0.82
COL18A1-204ENST00000400337 C2CD5Q86YS7 1000 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 WDR17Q8IZU2 1322 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 KCNJ18B7U540 433 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 TCP10L2B9ZVM9 353 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 ACTN4O43707 911 aaKnown RBP20.17■□□□□ 0.82
COL18A1-204ENST00000400337 OR52Z1P0C646 297 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 KCNJ12Q14500 433 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 ZMYND15Q9H091 742 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 BCRP11274 1271 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 SLC8A3P57103 927 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 BRDTQ58F21 947 aaPredicted RBP20.17■□□□□ 0.82
COL18A1-204ENST00000400337 NLRX1Q86UT6 975 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 GPR161Q8N6U8 529 aaKnown RBP20.17■□□□□ 0.82
COL18A1-204ENST00000400337 CD2BP2O95400 341 aaKnown RBP20.17■□□□□ 0.82
COL18A1-204ENST00000400337 HPDP32754 393 aaPredicted RBP20.17■□□□□ 0.82
COL18A1-204ENST00000400337 MORC3Q14149 939 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 ARHGAP44Q17R89 818 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 ZNF365Q70YC5 407 aa20.17■□□□□ 0.82
COL18A1-204ENST00000400337 UTP11Q9Y3A2 253 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms