RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 EPS8L3Q8TE67 593 aaKnown RBP6.54□□□□□ -1.36
HMGB3P7-201ENST00000400214 SLC16A10Q8TF71 515 aa6.54□□□□□ -1.36
HMGB3P7-201ENST00000400214 MFSD3Q96ES6 412 aa6.54□□□□□ -1.36
HMGB3P7-201ENST00000400214 SLC4A9Q96Q91 983 aa6.54□□□□□ -1.36
HMGB3P7-201ENST00000400214 CAAP1Q9H8G2 361 aa6.54□□□□□ -1.36
HMGB3P7-201ENST00000400214 DACH1Q9UI36 760 aa6.54□□□□□ -1.36
HMGB3P7-201ENST00000400214 NOB1Q9ULX3 412 aaKnown RBP6.54□□□□□ -1.36
HMGB3P7-201ENST00000400214 MAPK8IP1Q9UQF2 711 aa6.54□□□□□ -1.36
HMGB3P7-201ENST00000400214 DAAM1Q9Y4D1 1078 aa6.54□□□□□ -1.36
HMGB3P7-201ENST00000400214 PNPLA7Q6ZV29 1317 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 A0A087X0B3 334 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 IRS4O14654 1257 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 GIPC1O14908 333 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 PPP1R12BO60237 982 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 CPNE3O75131 537 aaKnown RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 STAU1O95793 577 aaKnown RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 AVPP01185 164 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 PTMAP06454 111 aaKnown RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 JUNDP17535 347 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 NEK2P51955 445 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 EPHA4P54764 986 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 ITPK1Q13572 414 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 SEPT6Q14141 434 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 MLC1Q15049 377 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 TNNI3KQ59H18 835 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 CT47A1Q5JQC4 288 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 FAM83BQ5T0W9 1011 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 RC3H1Q5TC82 1133 aaKnown RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 C1orf53Q5VUE5 145 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 USPL1Q5W0Q7 1092 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 PCNX4Q63HM2 1172 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 CCDC81Q6ZN84 652 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 JMYQ8N9B5 988 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 TEX19Q8NA77 164 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 LINC00116Q8NCU8 138 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 FLAD1Q8NFF5 587 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 ZNF296Q8WUU4 475 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 RSRP1Q9BUV0 290 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 SRRTQ9BXP5 876 aaKnown RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 PDGFDQ9GZP0 370 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 SPON1Q9HCB6 807 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 GMPR2Q9P2T1 348 aaKnown RBP6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 PFDN2Q9UHV9 154 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 LAMB4A4D0S4 1761 aa6.53□□□□□ -1.36
HMGB3P7-201ENST00000400214 KDM2BQ8NHM5 1336 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 CNTNAP4Q9C0A0 1308 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 CACNA1FO60840 1977 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 DYTNA2CJ06 578 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 A6NHS1 94 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 PRPF3O43395 683 aaKnown RBP6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 SLC26A4O43511 780 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 TLL1O43897 1013 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 MYL3P08590 195 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 IFIT2P09913 472 aaKnown RBP6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 EIF4A3P38919 411 aaKnown RBP6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 TEFQ10587 303 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 MTERF2Q49AM1 385 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 TBCELQ5QJ74 424 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 SH3BP5LQ7L8J4 393 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 ETFBKMTQ8IXQ9 262 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 DRC7Q8IY82 874 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 NIM1KQ8IY84 436 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 SMAD5Q99717 465 aaKnown RBP6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 RTFDC1Q9BY42 306 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 MTFR1LQ9H019 292 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 TFCP2L1Q9NZI6 479 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 ADAMTS8Q9UP79 889 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 PPP2R3BQ9Y5P8 575 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 KIF13BQ9NQT8 1826 aa6.52□□□□□ -1.37
HMGB3P7-201ENST00000400214 F2P00734 622 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 CALRP27797 417 aaKnown RBP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 SOX5P35711 763 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 TMPOP42166 694 aaKnown RBP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 NEK3P51956 506 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 SLC39A6Q13433 755 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 COL9A2Q14055 689 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 WDR43Q15061 677 aaKnown RBP eCLIP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 ZKSCAN2Q63HK3 967 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 IL31Q6EBC2 164 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 ZNF790Q6PG37 636 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 SPATC1Q76KD6 591 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 GET4Q7L5D6 327 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 AMIGO3Q86WK7 504 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 COL23A1Q86Y22 540 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 CREBRFQ8IUR6 639 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 SYNPOQ8N3V7 929 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 ATL2Q8NHH9 583 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 RTF1Q92541 710 aaKnown RBP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 NINJ1Q92982 152 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 CCDC74AQ96AQ1 378 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 CDC5LQ99459 802 aaKnown RBP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 TRIM56Q9BRZ2 755 aaKnown RBP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 C2orf49Q9BVC5 232 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 PRR14Q9BWN1 585 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 NT5C1AQ9BXI3 368 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 CDH19Q9H159 772 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 EVA1BQ9NVM1 165 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 PCDHB3Q9Y5E6 796 aa6.51□□□□□ -1.37
HMGB3P7-201ENST00000400214 MAPK8IP3Q9UPT6 1336 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 HEG1Q9ULI3 1381 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms