RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.04□□□□□ -0.64
PTPRM-203ENST00000400060 F6X3S4 739 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 AARSP49588 968 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPRM-203ENST00000400060 TTC19Q6DKK2 380 aaPredicted RBP11.04□□□□□ -0.64
PTPRM-203ENST00000400060 ATP6V1G3Q96LB4 118 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 FANCLQ9NW38 375 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 FAM53CQ9NYF3 392 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 SATB2Q9UPW6 733 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
PTPRM-203ENST00000400060 MRPL12P52815 198 aaKnown RBP11.04□□□□□ -0.64
PTPRM-203ENST00000400060 GNPTABQ3T906 1256 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 TMTC2Q8N394 836 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 ZNF446Q9NWS9 450 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 TPCN1Q9ULQ1 816 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 DPCR1Q3MIW9 517 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 LCA5Q86VQ0 697 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 PIP4K2CQ8TBX8 421 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 KRT23Q9C075 422 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 CDHR2Q9BYE9 1310 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 EXOC5O00471 708 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 USP28Q96RU2 1077 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 KCNK9Q9NPC2 374 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 BABAM1Q9NWV8 329 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 TRIM75PA6NK02 468 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 FAM107AO95990 144 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 MDH1P40925 334 aaKnown RBP11.03□□□□□ -0.64
PTPRM-203ENST00000400060 CALCOCO2Q13137 446 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
PTPRM-203ENST00000400060 MYSM1Q5VVJ2 828 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 RUNDC3BQ96NL0 473 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 RAB34Q9BZG1 259 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 RNF41Q9H4P4 317 aaPredicted RBP11.03□□□□□ -0.64
PTPRM-203ENST00000400060 MIS18AQ9NYP9 233 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 L1RE1Q9UN81 338 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 CTNND2Q9UQB3 1225 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 MED14O60244 1454 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 HNRNPCL1O60812 293 aaKnown RBP11.03□□□□□ -0.64
PTPRM-203ENST00000400060 TROVE2P10155 538 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTPRM-203ENST00000400060 KDM7AQ6ZMT4 941 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTPRM-203ENST00000400060 ENO4A6NNW6 628 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 PAX7P23759 505 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 VSNL1P62760 191 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 MAP7D1Q3KQU3 841 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 HSP90AA4PQ58FG1 418 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 TTLL7Q6ZT98 887 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 MAML3Q96JK9 1138 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 CCDC68Q9H2F9 335 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 CD248Q9HCU0 757 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 MTUS1Q9ULD2 1270 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 UBN2Q6ZU65 1347 aa11.03□□□□□ -0.64
PTPRM-203ENST00000400060 KLC1Q07866 573 aa11.02□□□□□ -0.64
PTPRM-203ENST00000400060 VPS52Q8N1B4 723 aa11.02□□□□□ -0.64
PTPRM-203ENST00000400060 ZKSCAN4Q969J2 545 aaPredicted RBP11.02□□□□□ -0.64
PTPRM-203ENST00000400060 ZNF653Q96CK0 615 aa11.02□□□□□ -0.64
PTPRM-203ENST00000400060 INTS9Q9NV88 658 aaKnown RBP11.02□□□□□ -0.64
PTPRM-203ENST00000400060 CASP14P31944 242 aa11.02□□□□□ -0.64
PTPRM-203ENST00000400060 IFIH1Q9BYX4 1025 aaKnown RBP11.02□□□□□ -0.64
PTPRM-203ENST00000400060 PDP2Q9P2J9 529 aa11.02□□□□□ -0.64
PTPRM-203ENST00000400060 TLDC2A0PJX2 215 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 ABLIM1O14639 778 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 ATP5JP18859 108 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
PTPRM-203ENST00000400060 DNM2P50570 870 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 DNA2P51530 1060 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 NDUFA8P51970 172 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 TRPC3Q13507 836 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 VPS37DQ86XT2 251 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 RNF217Q8TC41 542 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 ZBTB10Q96DT7 871 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 ZFATQ9P243 1243 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 OPHN1O60890 802 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 MRPS25P82663 173 aaKnown RBP11.02□□□□□ -0.65
PTPRM-203ENST00000400060 PIK3R5Q8WYR1 880 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 SIRT1Q96EB6 747 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 PTPRTO14522 1441 aa11.02□□□□□ -0.65
PTPRM-203ENST00000400060 ATP2A1O14983 1001 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 MFAP3LO75121 409 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 KRT18P05783 430 aaKnown RBP11.01□□□□□ -0.65
PTPRM-203ENST00000400060 STAT6P42226 847 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 AFMP43652 599 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 ZNF483Q8TF39 744 aaPredicted RBP11.01□□□□□ -0.65
PTPRM-203ENST00000400060 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
PTPRM-203ENST00000400060 PAPOLBQ9NRJ5 636 aaKnown RBP11.01□□□□□ -0.65
PTPRM-203ENST00000400060 KLHL33A6NCF5 533 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 VWA3AA6NCI4 1184 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 H3BQF6 201 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 MYO1FO00160 1098 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 ZBTB43O43298 467 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 MAGEA1P43355 309 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 CABP4P57796 275 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 KCTD16Q68DU8 428 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 CCDC84Q86UT8 332 aaPredicted RBP11.01□□□□□ -0.65
PTPRM-203ENST00000400060 CCT8L2Q96SF2 557 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 NOD2Q9HC29 1040 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 HAUS2Q9NVX0 235 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 IL1RAPL1Q9NZN1 696 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 LRRIQ3A6PVS8 624 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms