RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 BLZF1Q9H2G9 400 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 SENP2Q9HC62 589 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 FANCCQ00597 558 aa15.85■□□□□ 0.13
SCAF4-202ENST00000399804 FNBP4Q8N3X1 1017 aaPredicted RBP15.85■□□□□ 0.13
SCAF4-202ENST00000399804 LRWD1Q9UFC0 647 aa15.85■□□□□ 0.13
SCAF4-202ENST00000399804 PPP6R2O75170 966 aa15.85■□□□□ 0.13
SCAF4-202ENST00000399804 ICA1Q05084 483 aa15.85■□□□□ 0.13
SCAF4-202ENST00000399804 TCERG1LQ5VWI1 586 aa15.85■□□□□ 0.13
SCAF4-202ENST00000399804 TRMT44Q8IYL2 757 aaKnown RBP15.85■□□□□ 0.13
SCAF4-202ENST00000399804 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.85■□□□□ 0.133e-10■■■■□ 22.1
SCAF4-202ENST00000399804 PCDHB6Q9Y5E3 794 aa15.85■□□□□ 0.13
SCAF4-202ENST00000399804 PCDHA5Q9Y5H7 936 aa15.85■□□□□ 0.13
SCAF4-202ENST00000399804 PPP1R12BO60237 982 aaPredicted RBP15.85■□□□□ 0.13
SCAF4-202ENST00000399804 EN1Q05925 392 aaPredicted RBP15.85■□□□□ 0.13
SCAF4-202ENST00000399804 FAM114A1Q8IWE2 563 aa15.85■□□□□ 0.13
SCAF4-202ENST00000399804 C17orf53Q8N3J3 647 aaPredicted RBP15.85■□□□□ 0.13
SCAF4-202ENST00000399804 SNW1Q13573 536 aaKnown RBP15.84■□□□□ 0.13
SCAF4-202ENST00000399804 CCDC17Q96LX7 622 aa15.84■□□□□ 0.13
SCAF4-202ENST00000399804 PDCL3Q9H2J4 239 aa15.84■□□□□ 0.13
SCAF4-202ENST00000399804 SH2D4AQ9H788 454 aa15.84■□□□□ 0.13
SCAF4-202ENST00000399804 LUC7LQ9NQ29 371 aaKnown RBP15.84■□□□□ 0.13
SCAF4-202ENST00000399804 TBCAO75347 108 aaKnown RBP15.84■□□□□ 0.13
SCAF4-202ENST00000399804 SV2BQ7L1I2 683 aa15.84■□□□□ 0.13
SCAF4-202ENST00000399804 SP8Q8IXZ3 490 aa15.84■□□□□ 0.13
SCAF4-202ENST00000399804 CSRNP2Q9H175 543 aa15.84■□□□□ 0.13
SCAF4-202ENST00000399804 MROH7-TTC4A0A0A0MT08 1334 aa15.84■□□□□ 0.13
SCAF4-202ENST00000399804 TRIM21P19474 475 aaKnown RBP15.84■□□□□ 0.13
SCAF4-202ENST00000399804 TMTC3Q6ZXV5 915 aa15.84■□□□□ 0.13
SCAF4-202ENST00000399804 TXNRD3Q86VQ6 643 aa15.84■□□□□ 0.13
SCAF4-202ENST00000399804 GYS1P13807 737 aa15.83■□□□□ 0.13
SCAF4-202ENST00000399804 SLFN13Q68D06 897 aa15.83■□□□□ 0.13
SCAF4-202ENST00000399804 MTA3Q9BTC8 594 aa15.83■□□□□ 0.13
SCAF4-202ENST00000399804 CPVLQ9H3G5 476 aa15.83■□□□□ 0.13
SCAF4-202ENST00000399804 CALCRLQ16602 461 aa15.83■□□□□ 0.12
SCAF4-202ENST00000399804 CRAMP1Q96RY5 1269 aa15.83■□□□□ 0.12
SCAF4-202ENST00000399804 CTDNEP1O95476 244 aa15.83■□□□□ 0.12
SCAF4-202ENST00000399804 TTLL1O95922 423 aa15.83■□□□□ 0.12
SCAF4-202ENST00000399804 PDE4DQ08499 809 aa15.83■□□□□ 0.12
SCAF4-202ENST00000399804 TMED8Q6PL24 325 aaPredicted RBP15.83■□□□□ 0.12
SCAF4-202ENST00000399804 CSRNP1Q96S65 589 aa15.83■□□□□ 0.12
SCAF4-202ENST00000399804 PODNQ7Z5L7 613 aa15.83■□□□□ 0.12
SCAF4-202ENST00000399804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.83■□□□□ 0.12
SCAF4-202ENST00000399804 CPXCR1Q8N123 301 aa15.83■□□□□ 0.12
SCAF4-202ENST00000399804 SYMPKQ92797 1274 aaKnown RBP15.83■□□□□ 0.12
SCAF4-202ENST00000399804 GLT8D2Q9H1C3 349 aa15.83■□□□□ 0.12
SCAF4-202ENST00000399804 KIF5CO60282 957 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 SLC16A2P36021 539 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 CCT6AP40227 531 aaKnown RBP15.82■□□□□ 0.12
SCAF4-202ENST00000399804 SPA17Q15506 151 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 ABCB5Q2M3G0 1257 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 SNX29Q8TEQ0 813 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 TMEM47Q9BQJ4 181 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 PSTPIP2Q9H939 334 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 CTNND2Q9UQB3 1225 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
SCAF4-202ENST00000399804 CFBP00751 764 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 CC2D2BQ6DHV5 1058 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 CABP7Q86V35 215 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 TTLL6Q8N841 843 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 PIGSQ96S52 555 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 PRDM10Q9NQV6 1147 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 SWAP70Q9UH65 585 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 WTIPA6NIX2 430 aaPredicted RBP15.82■□□□□ 0.12
SCAF4-202ENST00000399804 GUCY1A2P33402 732 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 DPCR1Q3MIW9 517 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 CT47A1Q5JQC4 288 aaPredicted RBP15.82■□□□□ 0.12
SCAF4-202ENST00000399804 CEP135Q66GS9 1140 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 KCTD1Q719H9 257 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 NEK8Q86SG6 692 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 GOLGA6L1Q8N7Z2 621 aa15.82■□□□□ 0.12
SCAF4-202ENST00000399804 GDF11O95390 407 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 SYCP1Q15431 976 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 KIF4BQ2VIQ3 1234 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 TDRD12Q587J7 1177 aaKnown RBP15.81■□□□□ 0.12
SCAF4-202ENST00000399804 GALNT17Q6IS24 598 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 SPICE1Q8N0Z3 855 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 VGLL2Q8N8G2 317 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 OXER1Q8TDS5 423 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 UBXN4Q92575 508 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 XPO4Q9C0E2 1151 aaKnown RBP15.81■□□□□ 0.12
SCAF4-202ENST00000399804 FDPSP14324 419 aaKnown RBP15.81■□□□□ 0.12
SCAF4-202ENST00000399804 CDC25AP30304 524 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 CHRNA5P30532 468 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 TECP42680 631 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 C12orf60Q5U649 245 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 C11orf57Q6ZUT1 292 aaPredicted RBP15.81■□□□□ 0.12
SCAF4-202ENST00000399804 VPS16Q9H269 839 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 PCDHA4Q9UN74 947 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 GNG11P61952 73 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 PLS1Q14651 629 aa15.81■□□□□ 0.12
SCAF4-202ENST00000399804 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.81■□□□□ 0.122e-7■□□□□ 11.2
SCAF4-202ENST00000399804 KIF28PB7ZC32 967 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 CRKP46108 304 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 KIFC2Q96AC6 838 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 SEPT11Q9NVA2 429 aaKnown RBP15.8■□□□□ 0.12
SCAF4-202ENST00000399804 PKD2L1Q9P0L9 805 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 PI4KBQ9UBF8 816 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 PCDHA1Q9Y5I3 950 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 ORC4O43929 436 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 UBXN1Q04323 297 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms