RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 KIF5BP33176 963 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 STAG2Q8N3U4 1231 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 HOOK2Q96ED9 719 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 STK36Q9NRP7 1315 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 ATP2B2Q01814 1243 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 DCAF15Q66K64 600 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 DLK2Q6UY11 383 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 SULF1Q8IWU6 871 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 CCDC82Q8N4S0 544 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 SRBD1Q8N5C6 995 aaKnown RBP31.99■■■□□ 2.71
CPNE1-203ENST00000397442 MTMR7Q9Y216 660 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 MTMR6Q9Y217 621 aa31.99■■■□□ 2.71
CPNE1-203ENST00000397442 PALM3A6NDB9 673 aaPredicted RBP31.98■■■□□ 2.71
CPNE1-203ENST00000397442 ADM5C9JUS6 153 aa31.98■■■□□ 2.71
CPNE1-203ENST00000397442 SNHG28P0DPA3 235 aa31.98■■■□□ 2.71
CPNE1-203ENST00000397442 PDHBP11177 359 aa31.98■■■□□ 2.71
CPNE1-203ENST00000397442 ZNF112Q9UJU3 913 aa31.98■■■□□ 2.71
CPNE1-203ENST00000397442 UBE2Q2LH0YL09 131 aa31.97■■■□□ 2.71
CPNE1-203ENST00000397442 SSRP1Q08945 709 aaKnown RBP31.97■■■□□ 2.71
CPNE1-203ENST00000397442 TNPO1Q92973 898 aaKnown RBP31.97■■■□□ 2.71
CPNE1-203ENST00000397442 SLC26A6Q9BXS9 759 aa31.97■■■□□ 2.71
CPNE1-203ENST00000397442 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.97■■■□□ 2.71
CPNE1-203ENST00000397442 KIF3AQ9Y496 699 aa31.97■■■□□ 2.71
CPNE1-203ENST00000397442 WDR33Q9C0J8 1336 aaKnown RBP31.97■■■□□ 2.71
CPNE1-203ENST00000397442 USP17L5A8MUK1 530 aa31.96■■■□□ 2.71
CPNE1-203ENST00000397442 KRT26Q7Z3Y9 468 aa31.96■■■□□ 2.71
CPNE1-203ENST00000397442 PNMA8AQ86V59 439 aaPredicted RBP31.96■■■□□ 2.71
CPNE1-203ENST00000397442 ZNF341Q9BYN7 854 aa31.96■■■□□ 2.71
CPNE1-203ENST00000397442 CNTNAP5Q8WYK1 1306 aa31.96■■■□□ 2.71
CPNE1-203ENST00000397442 SUPT20HL1Q3ZLR7 823 aa31.95■■■□□ 2.71
CPNE1-203ENST00000397442 USP17L2Q6R6M4 530 aa31.95■■■□□ 2.71
CPNE1-203ENST00000397442 A0A1W2PRG0 241 aa31.95■■■□□ 2.7
CPNE1-203ENST00000397442 CTNND1O60716 968 aaKnown RBP31.95■■■□□ 2.7
CPNE1-203ENST00000397442 ASNSP08243 561 aa31.95■■■□□ 2.7
CPNE1-203ENST00000397442 PDIA4P13667 645 aaKnown RBP31.95■■■□□ 2.7
CPNE1-203ENST00000397442 SLC35G1Q2M3R5 365 aa31.95■■■□□ 2.7
CPNE1-203ENST00000397442 EAPPQ56P03 285 aaPredicted RBP31.95■■■□□ 2.7
CPNE1-203ENST00000397442 AIFM3Q96NN9 605 aa31.95■■■□□ 2.7
CPNE1-203ENST00000397442 RNF26Q9BY78 433 aaPredicted RBP31.95■■■□□ 2.7
CPNE1-203ENST00000397442 FZD1Q9UP38 647 aa31.95■■■□□ 2.7
CPNE1-203ENST00000397442 PARP1P09874 1014 aaKnown RBP31.94■■■□□ 2.7
CPNE1-203ENST00000397442 GOLGA8HP0CJ92 632 aa31.94■■■□□ 2.7
CPNE1-203ENST00000397442 ZSCAN22P10073 491 aaPredicted RBP31.94■■■□□ 2.7
CPNE1-203ENST00000397442 INPP5BP32019 993 aa31.94■■■□□ 2.7
CPNE1-203ENST00000397442 FOXD4L5Q5VV16 416 aaPredicted RBP31.94■■■□□ 2.7
CPNE1-203ENST00000397442 FOXD4L4Q8WXT5 416 aaPredicted RBP31.94■■■□□ 2.7
CPNE1-203ENST00000397442 MYH6P13533 1939 aa31.93■■■□□ 2.7
CPNE1-203ENST00000397442 CDC37L1Q7L3B6 337 aa31.93■■■□□ 2.7
CPNE1-203ENST00000397442 TRIM22Q8IYM9 498 aa31.93■■■□□ 2.7
CPNE1-203ENST00000397442 SYNPO2Q9UMS6 1093 aa31.93■■■□□ 2.7
CPNE1-203ENST00000397442 DOCK1Q14185 1865 aa31.93■■■□□ 2.7
CPNE1-203ENST00000397442 VPS37CA5D8V6 355 aaPredicted RBP31.92■■■□□ 2.7
CPNE1-203ENST00000397442 DCAF8L1A6NGE4 600 aa31.92■■■□□ 2.7
CPNE1-203ENST00000397442 GNAQP50148 359 aa31.92■■■□□ 2.7
CPNE1-203ENST00000397442 BAZ2BQ9UIF8 2168 aaKnown RBP31.92■■■□□ 2.7
CPNE1-203ENST00000397442 PRPF3O43395 683 aaKnown RBP31.92■■■□□ 2.7
CPNE1-203ENST00000397442 ECE1P42892 770 aa31.92■■■□□ 2.7
CPNE1-203ENST00000397442 GMCL1P1Q8NEA9 526 aa31.92■■■□□ 2.7
CPNE1-203ENST00000397442 ACER1Q8TDN7 264 aa31.92■■■□□ 2.7
CPNE1-203ENST00000397442 KLRG1Q96E93 195 aa31.92■■■□□ 2.7
CPNE1-203ENST00000397442 GINM1Q9NU53 330 aa31.92■■■□□ 2.7
CPNE1-203ENST00000397442 KLRF2D3W0D1 207 aa31.91■■■□□ 2.7
CPNE1-203ENST00000397442 FOSBP53539 338 aa31.91■■■□□ 2.7
CPNE1-203ENST00000397442 PKN1Q16512 942 aa31.91■■■□□ 2.7
CPNE1-203ENST00000397442 USP48Q86UV5 1035 aa31.91■■■□□ 2.7
CPNE1-203ENST00000397442 ALG1Q9BT22 464 aa31.91■■■□□ 2.7
CPNE1-203ENST00000397442 CYTH3O43739 400 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 DEXIO95424 95 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 POTEIP0CG38 1075 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 POTEJP0CG39 1038 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 ZNF543Q08ER8 600 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 ASPRV1Q53RT3 343 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 CCDC84Q86UT8 332 aaPredicted RBP31.9■■■□□ 2.7
CPNE1-203ENST00000397442 WRNIP1Q96S55 665 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 ARHGEF10LQ9HCE6 1279 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 GJB4Q9NTQ9 266 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 TMX2Q9Y320 296 aa31.9■■■□□ 2.7
CPNE1-203ENST00000397442 V9GY48 417 aaPredicted RBP31.9■■■□□ 2.7
CPNE1-203ENST00000397442 LZTS2Q9BRK4 669 aa31.89■■■□□ 2.7
CPNE1-203ENST00000397442 RRAGCQ9HB90 399 aa31.89■■■□□ 2.7
CPNE1-203ENST00000397442 FRMPD2Q68DX3 1309 aaPredicted RBP31.89■■■□□ 2.7
CPNE1-203ENST00000397442 F5H6K3 240 aa31.89■■■□□ 2.7
CPNE1-203ENST00000397442 USP2O75604 605 aaPredicted RBP31.89■■■□□ 2.7
CPNE1-203ENST00000397442 F13A1P00488 732 aa31.89■■■□□ 2.7
CPNE1-203ENST00000397442 KLRC3Q07444 240 aa31.89■■■□□ 2.7
CPNE1-203ENST00000397442 FBXO18Q8NFZ0 1043 aa31.89■■■□□ 2.7
CPNE1-203ENST00000397442 C8orf76Q96K31 380 aa31.89■■■□□ 2.7
CPNE1-203ENST00000397442 CPVLQ9H3G5 476 aa31.89■■■□□ 2.7
CPNE1-203ENST00000397442 PAPPA2Q9BXP8 1791 aa31.88■■■□□ 2.69
CPNE1-203ENST00000397442 hCG_1642624A0A1W2PR95 340 aa31.88■■■□□ 2.69
CPNE1-203ENST00000397442 VEGFAP15692 232 aaPredicted RBP31.88■■■□□ 2.69
CPNE1-203ENST00000397442 SLFN13Q68D06 897 aa31.88■■■□□ 2.69
CPNE1-203ENST00000397442 OTUD7BQ6GQQ9 843 aa31.88■■■□□ 2.69
CPNE1-203ENST00000397442 ZKSCAN4Q969J2 545 aaPredicted RBP31.88■■■□□ 2.69
CPNE1-203ENST00000397442 CDCA5Q96FF9 252 aa31.88■■■□□ 2.69
CPNE1-203ENST00000397442 SPZ1Q9BXG8 430 aa31.88■■■□□ 2.69
CPNE1-203ENST00000397442 GLIS2Q9BZE0 524 aaPredicted RBP31.88■■■□□ 2.69
CPNE1-203ENST00000397442 H3BQV1 296 aa31.87■■■□□ 2.69
CPNE1-203ENST00000397442 SMARCA1P28370 1054 aa31.87■■■□□ 2.69
CPNE1-203ENST00000397442 IFFO2Q5TF58 517 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms