RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 ALX1Q15699 326 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 GIGYF2Q6Y7W6 1299 aaKnown RBP16.61■□□□□ 0.25
CCNF-202ENST00000397066 NLRP10Q86W26 655 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 SMARCC1Q92922 1105 aaPredicted RBP16.61■□□□□ 0.25
CCNF-202ENST00000397066 MED15Q96RN5 788 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 LUC7L2Q9Y383 392 aaKnown RBP16.61■□□□□ 0.25
CCNF-202ENST00000397066 PPARAQ07869 468 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 PTGDRQ13258 359 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 CTR9Q6PD62 1173 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 ABHD10Q9NUJ1 306 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 RTL9Q8NET4 1388 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 USP54Q70EL1 1684 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 TUBBP07437 444 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 MTMR7Q9Y216 660 aa16.61■□□□□ 0.25
CCNF-202ENST00000397066 PDE8AO60658 829 aa16.6■□□□□ 0.25
CCNF-202ENST00000397066 PIK3AP1Q6ZUJ8 805 aa16.6■□□□□ 0.25
CCNF-202ENST00000397066 FAM204AQ9H8W3 233 aa16.6■□□□□ 0.25
CCNF-202ENST00000397066 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
CCNF-202ENST00000397066 HNRNPLLQ8WVV9 542 aaKnown RBP16.6■□□□□ 0.25
CCNF-202ENST00000397066 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
CCNF-202ENST00000397066 EPN1Q9Y6I3 576 aaPredicted RBP16.6■□□□□ 0.25
CCNF-202ENST00000397066 MAP3K15Q6ZN16 1313 aa16.6■□□□□ 0.25
CCNF-202ENST00000397066 A0A087X0B3 334 aa16.6■□□□□ 0.25
CCNF-202ENST00000397066 STIM1Q13586 685 aa16.6■□□□□ 0.25
CCNF-202ENST00000397066 FAM71BQ8TC56 605 aa16.6■□□□□ 0.25
CCNF-202ENST00000397066 MAP2K7O14733 419 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 MCM3P25205 808 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 BCAMP50895 628 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 NOA1Q8NC60 698 aaKnown RBP16.59■□□□□ 0.25
CCNF-202ENST00000397066 RNF26Q9BY78 433 aaPredicted RBP16.59■□□□□ 0.25
CCNF-202ENST00000397066 UBXN6Q9BZV1 441 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 PLEKHA4Q9H4M7 779 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 RMND1Q9NWS8 449 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 LCMT1Q9UIC8 334 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 STAT6P42226 847 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 TRIM28Q13263 835 aaKnown RBP16.59■□□□□ 0.25
CCNF-202ENST00000397066 TRIM14Q14142 442 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 TRIM47Q96LD4 638 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 C1orf167Q5SNV9 1468 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 CT47A1Q5JQC4 288 aaPredicted RBP16.59■□□□□ 0.25
CCNF-202ENST00000397066 PSD3Q9NYI0 1048 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 L1RE1Q9UN81 338 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 ZMYND10O75800 440 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 ABL1P00519 1130 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 STAG1Q8WVM7 1258 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 PLIN2Q99541 437 aa16.59■□□□□ 0.25
CCNF-202ENST00000397066 PPP1R3GB7ZBB8 358 aa16.58■□□□□ 0.25
CCNF-202ENST00000397066 TRIM21P19474 475 aaKnown RBP16.58■□□□□ 0.25
CCNF-202ENST00000397066 IGHMBP2P38935 993 aaKnown RBP16.58■□□□□ 0.25
CCNF-202ENST00000397066 DPYDQ12882 1025 aa16.58■□□□□ 0.25
CCNF-202ENST00000397066 AFAP1L1Q8TED9 768 aa16.58■□□□□ 0.25
CCNF-202ENST00000397066 HINFPQ9BQA5 517 aa16.58■□□□□ 0.25
CCNF-202ENST00000397066 ARFGEF2Q9Y6D5 1785 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 ARID4AP29374 1257 aaPredicted RBP16.58■□□□□ 0.24
CCNF-202ENST00000397066 ERVK-24P63145 666 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 CUL4BQ13620 913 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 MSANTD4Q8NCY6 345 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 MROH5Q6ZUA9 1318 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 MAGEB6P1A0A0J9YX57 407 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 TCRBV5S4A2TA0A5A2 114 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 ANKRD65E5RJM6 399 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 SRLQ86TD4 932 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 MYO1AQ9UBC5 1043 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 TRIM10Q9UDY6 481 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 SAR1BQ9Y6B6 198 aa16.58■□□□□ 0.24
CCNF-202ENST00000397066 SEMA3EO15041 775 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 PLEKHA8P1O95397 391 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 ZNF512BQ96KM6 892 aaPredicted RBP16.57■□□□□ 0.24
CCNF-202ENST00000397066 CDKAL1Q5VV42 579 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 OR8K1Q8NGG5 319 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 EEF2KMTQ96G04 330 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 CHP1Q99653 195 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 SRGAP2O75044 1071 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 RNF40O75150 1001 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 NDUFA10O95299 355 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 TCP11X2Q5H9J9 407 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 MED4Q9NPJ6 270 aa16.57■□□□□ 0.24
CCNF-202ENST00000397066 MACROD2A1Z1Q3 448 aa16.56■□□□□ 0.24
CCNF-202ENST00000397066 KRT86O43790 486 aa16.56■□□□□ 0.24
CCNF-202ENST00000397066 ZSCAN10Q96SZ4 725 aaPredicted RBP16.56■□□□□ 0.24
CCNF-202ENST00000397066 PYM1Q9BRP8 204 aaKnown RBP16.56■□□□□ 0.24
CCNF-202ENST00000397066 GNL3LQ9NVN8 582 aaKnown RBP16.56■□□□□ 0.24
CCNF-202ENST00000397066 RAB21Q9UL25 225 aa16.56■□□□□ 0.24
CCNF-202ENST00000397066 KRT83P78385 493 aa16.56■□□□□ 0.24
CCNF-202ENST00000397066 EARS2Q5JPH6 523 aaKnown RBP16.56■□□□□ 0.24
CCNF-202ENST00000397066 DZIP3Q86Y13 1208 aaKnown RBP16.56■□□□□ 0.24
CCNF-202ENST00000397066 CCDC47Q96A33 483 aaKnown RBP16.56■□□□□ 0.24
CCNF-202ENST00000397066 RWDD2AQ9UIY3 292 aa16.56■□□□□ 0.24
CCNF-202ENST00000397066 MATR3P43243 847 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCNF-202ENST00000397066 DRC1Q96MC2 740 aa16.56■□□□□ 0.24
CCNF-202ENST00000397066 GDAQ9Y2T3 454 aa16.56■□□□□ 0.24
CCNF-202ENST00000397066 CKAP4Q07065 602 aaKnown RBP16.56■□□□□ 0.24
CCNF-202ENST00000397066 RUFY1Q96T51 708 aa16.56■□□□□ 0.24
CCNF-202ENST00000397066 GTPBP6O43824 516 aaPredicted RBP16.55■□□□□ 0.24
CCNF-202ENST00000397066 RPN1P04843 607 aaKnown RBP16.55■□□□□ 0.24
CCNF-202ENST00000397066 USP5P45974 858 aa16.55■□□□□ 0.24
CCNF-202ENST00000397066 SLC4A8Q2Y0W8 1093 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms