RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 AKNAD1Q5T1N1 836 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 TRIM10Q9UDY6 481 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 SRP68Q9UHB9 627 aaKnown RBP14.9□□□□□ -0.02
NFKB1-202ENST00000394820 MAGEB6P1A0A0J9YX57 407 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 CCDC196A0A1B0GTZ2 297 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 TSPY2A6NKD2 308 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 ATL3Q6DD88 541 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 CACNA2D4Q7Z3S7 1137 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 IQCA1Q86XH1 822 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 NBPF3Q9H094 633 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 GBP3Q9H0R5 595 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 FAM204AQ9H8W3 233 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 LUC7L2Q9Y383 392 aaKnown RBP14.9□□□□□ -0.02
NFKB1-202ENST00000394820 SAMM50Q9Y512 469 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 MROH5Q6ZUA9 1318 aa14.9□□□□□ -0.02
NFKB1-202ENST00000394820 TRPM3Q9HCF6 1732 aaPredicted RBP14.9□□□□□ -0.02
NFKB1-202ENST00000394820 SPTY2D1Q68D10 685 aaPredicted RBP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 MARCH10Q8NA82 808 aaPredicted RBP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 OSBPL5Q9H0X9 879 aaPredicted RBP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 RRP15Q9Y3B9 282 aaKnown RBP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 CCDC194A0A1B0GVG4 234 aa14.89□□□□□ -0.03
NFKB1-202ENST00000394820 TADA3O75528 432 aa14.89□□□□□ -0.03
NFKB1-202ENST00000394820 TTC31Q49AM3 519 aaPredicted RBP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 MAATS1Q7Z4T9 603 aa14.89□□□□□ -0.03
NFKB1-202ENST00000394820 TMEM51Q9NW97 253 aa14.89□□□□□ -0.03
NFKB1-202ENST00000394820 AATFQ9NY61 560 aaKnown RBP eCLIP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 LMTK3Q96Q04 1460 aa14.89□□□□□ -0.03
NFKB1-202ENST00000394820 KDM4FA0A1W2PPD8 638 aa14.89□□□□□ -0.03
NFKB1-202ENST00000394820 HGSO14964 777 aaPredicted RBP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 SND1Q7KZF4 910 aaKnown RBP eCLIP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 TAX1BP1Q86VP1 789 aa14.89□□□□□ -0.03
NFKB1-202ENST00000394820 NBPF5PQ86XG9 351 aaPredicted RBP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.89□□□□□ -0.03
NFKB1-202ENST00000394820 RFX7Q2KHR2 1363 aa14.89□□□□□ -0.03
NFKB1-202ENST00000394820 KIF1AQ12756 1690 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 HPDP32754 393 aaPredicted RBP14.88□□□□□ -0.03
NFKB1-202ENST00000394820 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.88□□□□□ -0.03
NFKB1-202ENST00000394820 FBXO3Q9UK99 471 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 ZNF652Q9Y2D9 606 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 ZMYM6O95789 1325 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 C3orf67Q6ZVT6 689 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 PLA2G12BQ9BX93 195 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 DCCP43146 1447 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 SCN11AQ9UI33 1791 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 GSG1L2A8MUP6 293 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 PTF1AQ7RTS3 328 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 SYMPKQ92797 1274 aaKnown RBP14.88□□□□□ -0.03
NFKB1-202ENST00000394820 CCDC113Q9H0I3 377 aa14.88□□□□□ -0.03
NFKB1-202ENST00000394820 SEPT11Q9NVA2 429 aaKnown RBP14.88□□□□□ -0.03
NFKB1-202ENST00000394820 SASH3O75995 380 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 SLC7A5Q01650 507 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 HEATR3Q7Z4Q2 680 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 ZNF34Q8IZ26 560 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 MLKLQ8NB16 471 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 GPR101Q96P66 508 aaPredicted RBP14.87□□□□□ -0.03
NFKB1-202ENST00000394820 FAM207AQ9NSI2 230 aaPredicted RBP14.87□□□□□ -0.03
NFKB1-202ENST00000394820 ANKIB1Q9P2G1 1089 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 SHTN1A0MZ66 631 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 INTS5Q6P9B9 1019 aaKnown RBP14.87□□□□□ -0.03
NFKB1-202ENST00000394820 KSR1Q8IVT5 923 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 CELF1Q92879 486 aaKnown RBP14.87□□□□□ -0.03
NFKB1-202ENST00000394820 KRT23Q9C075 422 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 UBA5Q9GZZ9 404 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 LCMT1Q9UIC8 334 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 PARP3Q9Y6F1 533 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 CDHR2Q9BYE9 1310 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 SMIM23A6NLE4 172 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 GNPATO15228 680 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 KRT18P05783 430 aaKnown RBP14.87□□□□□ -0.03
NFKB1-202ENST00000394820 CCT5P48643 541 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 ASIC1P78348 528 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 SYCP1Q15431 976 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 TMEM87BQ96K49 555 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 LY9Q9HBG7 655 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 MKNK2Q9HBH9 465 aa14.87□□□□□ -0.03
NFKB1-202ENST00000394820 TBC1D8BQ0IIM8 1120 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 CCDC42Q96M95 316 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 JCADQ9P266 1359 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 USP17L12C9JPN9 530 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 USP17L21D6R901 530 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 STX10O60499 249 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 KLRK1P26718 216 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 CYP2C19P33261 490 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 PPARAQ07869 468 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 RILPL1Q5EBL4 403 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 SRGAP1Q7Z6B7 1085 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
NFKB1-202ENST00000394820 AGXT2Q9BYV1 514 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 RDXP35241 583 aaKnown RBP14.86□□□□□ -0.03
NFKB1-202ENST00000394820 NOP2P46087 812 aaKnown RBP14.86□□□□□ -0.03
NFKB1-202ENST00000394820 EVX2Q03828 476 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 VGLL2Q8N8G2 317 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 AFAP1L1Q8TED9 768 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 NELFBQ8WX92 580 aa14.86□□□□□ -0.03
NFKB1-202ENST00000394820 GPKOWQ92917 476 aaPredicted RBP eCLIP14.86□□□□□ -0.03
NFKB1-202ENST00000394820 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.86□□□□□ -0.03
NFKB1-202ENST00000394820 TRIM49BA6NDI0 452 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 ERVV-1B6SEH8 477 aa14.85□□□□□ -0.03
NFKB1-202ENST00000394820 NMT2O60551 498 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms