RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 MYL10Q9BUA6 226 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 CTAGE15A4D2H0 777 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 RGL2O15211 777 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 ATP8B1O43520 1251 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 KRT18P05783 430 aaKnown RBP6.4□□□□□ -1.38
RFFL-202ENST00000394597 PARP1P09874 1014 aaKnown RBP6.4□□□□□ -1.38
RFFL-202ENST00000394597 CTAGE8P0CG41 777 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 KRT2P35908 639 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 PEX19P40855 299 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 TNNI2P48788 182 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 MECOMQ03112 1051 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 TRAF1Q13077 416 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 FAM47AQ5JRC9 791 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 EP400NLQ6ZTU2 488 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 CTAGE6Q86UF2 777 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 CTAGE4Q8IX94 777 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 GPR161Q8N6U8 529 aaKnown RBP6.4□□□□□ -1.38
RFFL-202ENST00000394597 PCMTD1Q96MG8 357 aaPredicted RBP6.4□□□□□ -1.38
RFFL-202ENST00000394597 RAB34Q9BZG1 259 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 COA1Q9GZY4 146 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 BMP2KQ9NSY1 1161 aaPredicted RBP6.4□□□□□ -1.38
RFFL-202ENST00000394597 V9GY48 417 aaPredicted RBP6.4□□□□□ -1.38
RFFL-202ENST00000394597 SALL3Q9BXA9 1300 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 DTNBO60941 627 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 NAPAP54920 295 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 STIM1Q13586 685 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 ZNF654Q8IZM8 581 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 MRPS27Q92552 414 aaKnown RBP6.4□□□□□ -1.38
RFFL-202ENST00000394597 CCDC114Q96M63 670 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 SLC24A3Q9HC58 644 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 C6orf50Q9HD87 102 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 IFNKQ9P0W0 207 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 CAPN7Q9Y6W3 813 aa6.4□□□□□ -1.38
RFFL-202ENST00000394597 TRIM75PA6NK02 468 aa6.4□□□□□ -1.39
RFFL-202ENST00000394597 EN1Q05925 392 aaPredicted RBP6.4□□□□□ -1.39
RFFL-202ENST00000394597 TMEM266Q2M3C6 531 aa6.4□□□□□ -1.39
RFFL-202ENST00000394597 SP8Q8IXZ3 490 aa6.4□□□□□ -1.39
RFFL-202ENST00000394597 FAM76AQ8TAV0 307 aa6.4□□□□□ -1.39
RFFL-202ENST00000394597 ATRIPQ8WXE1 791 aa6.4□□□□□ -1.39
RFFL-202ENST00000394597 EFCAB8A8MWE9 144 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 ZEB2O60315 1214 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 WDHD1O75717 1129 aaPredicted RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 LMOD1P29536 600 aaPredicted RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 NAP1L1P55209 391 aaKnown RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 UBASH3AP57075 661 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 ETF1P62495 437 aaKnown RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 SCRN1Q12765 414 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 NEDD9Q14511 834 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 DLGAP5Q15398 846 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 TSGA10IPQ3SY00 556 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 KANK3Q6NY19 840 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 KIAA0825Q8IV33 1275 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 PHKBQ93100 1093 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 CRAMP1Q96RY5 1269 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 PYM1Q9BRP8 204 aaKnown RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 PDE11AQ9HCR9 933 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 CD209Q9NNX6 404 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 SPATS2LQ9NUQ6 558 aaKnown RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 MTMR6Q9Y217 621 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 NDUFAB1O14561 156 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 MARCKSP29966 332 aaPredicted RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 GNA11P29992 359 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 ADD1P35611 737 aaKnown RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 SYKP43405 635 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 SCNN1DP51172 638 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 EIF6P56537 245 aaKnown RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 KARSQ15046 597 aaKnown RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 ALX1Q15699 326 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 OTUD7BQ6GQQ9 843 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 CDC37L1Q7L3B6 337 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 FANCBQ8NB91 859 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 GPR101Q96P66 508 aaPredicted RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 LZTS2Q9BRK4 669 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 PLEKHA4Q9H4M7 779 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 TCP11L1Q9NUJ3 509 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 TNKSO95271 1327 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 FRMD3A2A2Y4 597 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 GPSM2P81274 684 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 TCP10Q12799 353 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 MUM1L1Q5H9M0 696 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 IQCEQ6IPM2 695 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 FAM173BQ6P4H8 233 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 TADA2BQ86TJ2 420 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 CPLX3Q8WVH0 158 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 ZMYM6O95789 1325 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 LMO7Q8WWI1 1683 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 UBA7P41226 1012 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 CHMP4BP1P59074 171 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 RILPL1Q5EBL4 403 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 CCDC181Q5TID7 509 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 KRT40Q6A162 431 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 B4GALNT4Q76KP1 1039 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 LRP10Q7Z4F1 713 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 N4BP2L2Q92802 583 aaPredicted RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 KCNF1Q9H3M0 494 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 EHMT1Q9H9B1 1298 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 INCENPQ9NQS7 918 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 ZSWIM5Q9P217 1185 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 MAGEC2Q9UBF1 373 aaPredicted RBP6.39□□□□□ -1.39
RFFL-202ENST00000394597 ODF2LQ9ULJ1 636 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms