RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 SLC3A2P08195 630 aaKnown RBP36.63■■■■□ 3.45
CMTM4-202ENST00000394106 ERVK-9P63128 1117 aa36.63■■■■□ 3.45
CMTM4-202ENST00000394106 ERVK-24P63145 666 aa36.63■■■■□ 3.45
CMTM4-202ENST00000394106 ZNF444Q8N0Y2 327 aaPredicted RBP36.63■■■■□ 3.45
CMTM4-202ENST00000394106 TMEM106CQ9BVX2 250 aa36.63■■■■□ 3.45
CMTM4-202ENST00000394106 BIN2Q9UBW5 565 aaPredicted RBP36.63■■■■□ 3.45
CMTM4-202ENST00000394106 GREB1LQ9C091 1923 aaPredicted RBP36.63■■■■□ 3.45
CMTM4-202ENST00000394106 DOCK3Q8IZD9 2030 aa36.63■■■■□ 3.45
CMTM4-202ENST00000394106 Q3C1V9 767 aa36.62■■■■□ 3.45
CMTM4-202ENST00000394106 LPAR1Q92633 364 aa36.62■■■■□ 3.45
CMTM4-202ENST00000394106 VCPKMTQ9H867 229 aa36.62■■■■□ 3.45
CMTM4-202ENST00000394106 SDSP20132 328 aa36.61■■■■□ 3.45
CMTM4-202ENST00000394106 PDE4AP27815 886 aa36.61■■■■□ 3.45
CMTM4-202ENST00000394106 PDE4BQ07343 736 aa36.61■■■■□ 3.45
CMTM4-202ENST00000394106 CCAR1Q8IX12 1150 aaKnown RBP36.61■■■■□ 3.45
CMTM4-202ENST00000394106 RAD21O60216 631 aa36.6■■■■□ 3.45
CMTM4-202ENST00000394106 ADCY3O60266 1144 aa36.6■■■■□ 3.45
CMTM4-202ENST00000394106 SLAIN1Q8ND83 568 aa36.6■■■■□ 3.45
CMTM4-202ENST00000394106 RABGAP1Q9Y3P9 1069 aa36.6■■■■□ 3.45
CMTM4-202ENST00000394106 RBBP6Q7Z6E9 1792 aaKnown RBP36.6■■■■□ 3.45
CMTM4-202ENST00000394106 SPDYE16A6NNV3 312 aaPredicted RBP36.59■■■■□ 3.45
CMTM4-202ENST00000394106 ZNF589Q86UQ0 364 aaPredicted RBP36.59■■■■□ 3.45
CMTM4-202ENST00000394106 CENPFP49454 3210 aa36.59■■■■□ 3.45
CMTM4-202ENST00000394106 CNMDO75829 334 aa36.58■■■■□ 3.45
CMTM4-202ENST00000394106 ELNP15502 786 aa36.58■■■■□ 3.45
CMTM4-202ENST00000394106 IRF5Q13568 498 aa36.58■■■■□ 3.45
CMTM4-202ENST00000394106 COG2Q14746 738 aa36.58■■■■□ 3.45
CMTM4-202ENST00000394106 PORCNQ9H237 461 aa36.58■■■■□ 3.45
CMTM4-202ENST00000394106 GOPCQ9HD26 462 aa36.58■■■■□ 3.45
CMTM4-202ENST00000394106 CTDSPL2Q05D32 466 aa36.57■■■■□ 3.44
CMTM4-202ENST00000394106 CCDC171Q6TFL3 1326 aa36.57■■■■□ 3.44
CMTM4-202ENST00000394106 MAPK4P31152 587 aa36.56■■■■□ 3.44
CMTM4-202ENST00000394106 MTFR1Q15390 333 aa36.56■■■■□ 3.44
CMTM4-202ENST00000394106 LBX2Q6XYB7 198 aa36.56■■■■□ 3.44
CMTM4-202ENST00000394106 CWC22Q9HCG8 908 aaKnown RBP36.56■■■■□ 3.44
CMTM4-202ENST00000394106 DIAPH3Q9NSV4 1193 aa36.56■■■■□ 3.44
CMTM4-202ENST00000394106 HOXC10Q9NYD6 342 aa36.56■■■■□ 3.44
CMTM4-202ENST00000394106 BTBD7Q9P203 1132 aa36.56■■■■□ 3.44
CMTM4-202ENST00000394106 WDR46O15213 610 aaKnown RBP36.55■■■■□ 3.44
CMTM4-202ENST00000394106 FLOT1O75955 427 aa36.55■■■■□ 3.44
CMTM4-202ENST00000394106 UBXN2AP68543 259 aa36.55■■■■□ 3.44
CMTM4-202ENST00000394106 SAMD1Q6SPF0 538 aaPredicted RBP36.55■■■■□ 3.44
CMTM4-202ENST00000394106 NYAP2Q9P242 653 aa36.55■■■■□ 3.44
CMTM4-202ENST00000394106 GJD2Q9UKL4 321 aa36.55■■■■□ 3.44
CMTM4-202ENST00000394106 TSPY3P0CV98 308 aa36.54■■■■□ 3.44
CMTM4-202ENST00000394106 TSPY8P0CW00 308 aa36.54■■■■□ 3.44
CMTM4-202ENST00000394106 HSPD1P10809 573 aaKnown RBP36.54■■■■□ 3.44
CMTM4-202ENST00000394106 EN2P19622 333 aaPredicted RBP36.54■■■■□ 3.44
CMTM4-202ENST00000394106 CCNA1P78396 465 aa36.54■■■■□ 3.44
CMTM4-202ENST00000394106 ALX1Q15699 326 aa36.54■■■■□ 3.44
CMTM4-202ENST00000394106 FAM47AQ5JRC9 791 aa36.54■■■■□ 3.44
CMTM4-202ENST00000394106 PXYLP1Q8TE99 480 aa36.54■■■■□ 3.44
CMTM4-202ENST00000394106 PLXNB2O15031 1838 aa36.53■■■■□ 3.44
CMTM4-202ENST00000394106 IGKV6D-41A0A0C4DH26 115 aa36.53■■■■□ 3.44
CMTM4-202ENST00000394106 CWC27Q6UX04 472 aaKnown RBP36.53■■■■□ 3.44
CMTM4-202ENST00000394106 CEP95Q96GE4 821 aa36.53■■■■□ 3.44
CMTM4-202ENST00000394106 CLIP2Q9UDT6 1046 aa36.53■■■■□ 3.44
CMTM4-202ENST00000394106 RLFQ13129 1914 aa36.53■■■■□ 3.44
CMTM4-202ENST00000394106 MYH4Q9Y623 1939 aa36.52■■■■□ 3.44
CMTM4-202ENST00000394106 FGAP02671 866 aa36.52■■■■□ 3.44
CMTM4-202ENST00000394106 MFAP1P55081 439 aaKnown RBP36.52■■■■□ 3.44
CMTM4-202ENST00000394106 TFAP4Q01664 338 aa36.52■■■■□ 3.44
CMTM4-202ENST00000394106 WDR78Q5VTH9 848 aa36.52■■■■□ 3.44
CMTM4-202ENST00000394106 GPR142Q7Z601 462 aa36.52■■■■□ 3.44
CMTM4-202ENST00000394106 INCENPQ9NQS7 918 aa36.52■■■■□ 3.44
CMTM4-202ENST00000394106 KIAA0100Q14667 2235 aaKnown RBP36.52■■■■□ 3.44
CMTM4-202ENST00000394106 HIP1O00291 1037 aa36.51■■■■□ 3.44
CMTM4-202ENST00000394106 DSG3P32926 999 aa36.51■■■■□ 3.44
CMTM4-202ENST00000394106 TTC22Q5TAA0 569 aa36.51■■■■□ 3.44
CMTM4-202ENST00000394106 PLEKHH3Q7Z736 793 aa36.51■■■■□ 3.44
CMTM4-202ENST00000394106 NEDD1Q8NHV4 660 aa36.51■■■■□ 3.44
CMTM4-202ENST00000394106 NUDT12Q9BQG2 462 aa36.51■■■■□ 3.44
CMTM4-202ENST00000394106 INHAP05111 366 aa36.5■■■■□ 3.43
CMTM4-202ENST00000394106 CCL5P13501 91 aa36.5■■■■□ 3.43
CMTM4-202ENST00000394106 FAM83BQ5T0W9 1011 aa36.5■■■■□ 3.43
CMTM4-202ENST00000394106 MTMR4Q9NYA4 1195 aa36.5■■■■□ 3.43
CMTM4-202ENST00000394106 ANAPC4Q9UJX5 808 aa36.5■■■■□ 3.43
CMTM4-202ENST00000394106 DDX52Q9Y2R4 599 aaKnown RBP eCLIP36.5■■■■□ 3.43
CMTM4-202ENST00000394106 PLIN4Q96Q06 1357 aa36.5■■■■□ 3.43
CMTM4-202ENST00000394106 CYP2B6P20813 491 aa36.49■■■■□ 3.43
CMTM4-202ENST00000394106 SOCS4Q8WXH5 440 aa36.49■■■■□ 3.43
CMTM4-202ENST00000394106 ATG4CQ96DT6 458 aa36.49■■■■□ 3.43
CMTM4-202ENST00000394106 PARP14Q460N5 1801 aa36.49■■■■□ 3.43
CMTM4-202ENST00000394106 A0A0G2JMZ2 1700 aa36.48■■■■□ 3.43
CMTM4-202ENST00000394106 GSPT1P15170 499 aaKnown RBP36.48■■■■□ 3.43
CMTM4-202ENST00000394106 NUP88Q99567 741 aaPredicted RBP36.48■■■■□ 3.43
CMTM4-202ENST00000394106 RNF208Q9H0X6 261 aa36.48■■■■□ 3.43
CMTM4-202ENST00000394106 F5H6K3 240 aa36.47■■■■□ 3.43
CMTM4-202ENST00000394106 TTLL1O95922 423 aa36.47■■■■□ 3.43
CMTM4-202ENST00000394106 KLRC3Q07444 240 aa36.47■■■■□ 3.43
CMTM4-202ENST00000394106 UNC93B1Q9H1C4 597 aa36.47■■■■□ 3.43
CMTM4-202ENST00000394106 FBXO28Q9NVF7 368 aa36.47■■■■□ 3.43
CMTM4-202ENST00000394106 TACC3Q9Y6A5 838 aa36.47■■■■□ 3.43
CMTM4-202ENST00000394106 ZMYM6O95789 1325 aa36.46■■■■□ 3.43
CMTM4-202ENST00000394106 TSPY2A6NKD2 308 aa36.46■■■■□ 3.43
CMTM4-202ENST00000394106 NDUFB10O96000 172 aa36.46■■■■□ 3.43
CMTM4-202ENST00000394106 PLS1Q14651 629 aa36.46■■■■□ 3.43
CMTM4-202ENST00000394106 LRRC47Q8N1G4 583 aaKnown RBP36.46■■■■□ 3.43
CMTM4-202ENST00000394106 MB21D1Q8N884 522 aa36.46■■■■□ 3.43
CMTM4-202ENST00000394106 TOMM22Q9NS69 142 aa36.46■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms