RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MOV10L1Q9BXT6 1211 aaKnown RBP18.69■□□□□ 0.58
CHMP3-202ENST00000393773 CABP5Q9NP86 173 aa18.69■□□□□ 0.58
CHMP3-202ENST00000393773 SMCHD1A6NHR9 2005 aa18.69■□□□□ 0.58
CHMP3-202ENST00000393773 POTEB2H3BUK9 544 aa18.68■□□□□ 0.58
CHMP3-202ENST00000393773 ADORA2AP29274 412 aa18.68■□□□□ 0.58
CHMP3-202ENST00000393773 CNGA1P29973 690 aa18.68■□□□□ 0.58
CHMP3-202ENST00000393773 ATN1P54259 1190 aaPredicted RBP18.68■□□□□ 0.58
CHMP3-202ENST00000393773 RTP1P59025 263 aa18.68■□□□□ 0.58
CHMP3-202ENST00000393773 OLFML2BQ68BL8 750 aa18.68■□□□□ 0.58
CHMP3-202ENST00000393773 FAM109BQ6ICB4 259 aaPredicted RBP18.68■□□□□ 0.58
CHMP3-202ENST00000393773 AACSQ86V21 672 aa18.68■□□□□ 0.58
CHMP3-202ENST00000393773 EXOC6BQ9Y2D4 811 aa18.68■□□□□ 0.58
CHMP3-202ENST00000393773 MAGEB6P1A0A0J9YX57 407 aa18.67■□□□□ 0.58
CHMP3-202ENST00000393773 PDE6AP16499 860 aa18.67■□□□□ 0.58
CHMP3-202ENST00000393773 KIAA1755Q5JYT7 1200 aa18.67■□□□□ 0.58
CHMP3-202ENST00000393773 ERC1Q8IUD2 1116 aa18.66■□□□□ 0.58
CHMP3-202ENST00000393773 SHCBP1Q8NEM2 672 aa18.66■□□□□ 0.58
CHMP3-202ENST00000393773 LBHD1Q9BQE6 289 aaPredicted RBP18.66■□□□□ 0.58
CHMP3-202ENST00000393773 TANGO6Q9C0B7 1094 aa18.66■□□□□ 0.58
CHMP3-202ENST00000393773 SPATC1LQ9H0A9 340 aa18.66■□□□□ 0.58
CHMP3-202ENST00000393773 TCRBV5S4A2TA0A5A2 114 aa18.65■□□□□ 0.58
CHMP3-202ENST00000393773 POLR3DP05423 398 aaPredicted RBP18.65■□□□□ 0.58
CHMP3-202ENST00000393773 COG2Q14746 738 aa18.65■□□□□ 0.58
CHMP3-202ENST00000393773 SNX17Q15036 470 aa18.65■□□□□ 0.58
CHMP3-202ENST00000393773 GJC2Q5T442 439 aaPredicted RBP18.65■□□□□ 0.58
CHMP3-202ENST00000393773 SLC44A5Q8NCS7 719 aa18.65■□□□□ 0.58
CHMP3-202ENST00000393773 CRNKL1Q9BZJ0 848 aaKnown RBP18.65■□□□□ 0.58
CHMP3-202ENST00000393773 MCM9Q9NXL9 1143 aa18.65■□□□□ 0.58
CHMP3-202ENST00000393773 COBLO75128 1261 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 CYP2D6P10635 497 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 ERCC3P19447 782 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 TTF1Q15361 905 aaPredicted RBP18.64■□□□□ 0.57
CHMP3-202ENST00000393773 DPP9Q86TI2 863 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 CLEC10AQ8IUN9 316 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 LCORLQ8N3X6 602 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 SDR42E1Q8WUS8 393 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 DCP1AQ9NPI6 582 aaPredicted RBP18.64■□□□□ 0.57
CHMP3-202ENST00000393773 ATP11BQ9Y2G3 1177 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 ZNF532Q9HCE3 1301 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 ROBO3Q96MS0 1386 aa18.64■□□□□ 0.57
CHMP3-202ENST00000393773 MPHOSPH10O00566 681 aaKnown RBP18.63■□□□□ 0.57
CHMP3-202ENST00000393773 SEPT4O43236 478 aa18.63■□□□□ 0.57
CHMP3-202ENST00000393773 STRNO43815 780 aa18.63■□□□□ 0.57
CHMP3-202ENST00000393773 SLC9C2Q5TAH2 1124 aa18.63■□□□□ 0.57
CHMP3-202ENST00000393773 ANO1Q5XXA6 986 aa18.63■□□□□ 0.57
CHMP3-202ENST00000393773 TMEM179Q6ZVK1 233 aa18.63■□□□□ 0.57
CHMP3-202ENST00000393773 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHMP3-202ENST00000393773 MB21D1Q8N884 522 aa18.63■□□□□ 0.57
CHMP3-202ENST00000393773 IL1RAPL2Q9NP60 686 aa18.63■□□□□ 0.57
CHMP3-202ENST00000393773 MYH4Q9Y623 1939 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 KBTBD13C9JR72 458 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 DSG3P32926 999 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 TRIM60Q495X7 471 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 SLC39A5Q6ZMH5 540 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 ABRAQ8N0Z2 381 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 ARRDC4Q8NCT1 418 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 ATG4CQ96DT6 458 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 FAM161BQ96MY7 647 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 COL25A1Q9BXS0 654 aaPredicted RBP18.62■□□□□ 0.57
CHMP3-202ENST00000393773 PDLIM7Q9NR12 457 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 HOXC10Q9NYD6 342 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 PRKAG2Q9UGJ0 569 aa18.62■□□□□ 0.57
CHMP3-202ENST00000393773 MCM3APO60318 1980 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 AKR1B1P15121 316 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 FAM47AQ5JRC9 791 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 C9orf50Q5SZB4 431 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 ZNF697Q5TEC3 545 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 SIAH1Q8IUQ4 282 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 RHPN1Q8TCX5 695 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.61■□□□□ 0.57
CHMP3-202ENST00000393773 MAML3Q96JK9 1138 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 MROH8Q9H579 483 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 SWAP70Q9UH65 585 aa18.61■□□□□ 0.57
CHMP3-202ENST00000393773 GOLIM4O00461 696 aa18.6■□□□□ 0.57
CHMP3-202ENST00000393773 ICA1Q05084 483 aa18.6■□□□□ 0.57
CHMP3-202ENST00000393773 LRRC41Q15345 812 aa18.6■□□□□ 0.57
CHMP3-202ENST00000393773 SHHQ15465 462 aa18.6■□□□□ 0.57
CHMP3-202ENST00000393773 SPICE1Q8N0Z3 855 aa18.6■□□□□ 0.57
CHMP3-202ENST00000393773 DYNLL2Q96FJ2 89 aa18.6■□□□□ 0.57
CHMP3-202ENST00000393773 VCPKMTQ9H867 229 aa18.6■□□□□ 0.57
CHMP3-202ENST00000393773 PRDM5Q9NQX1 630 aaPredicted RBP18.6■□□□□ 0.57
CHMP3-202ENST00000393773 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
CHMP3-202ENST00000393773 SMIM22K7EJ46 135 aa18.59■□□□□ 0.57
CHMP3-202ENST00000393773 FLOT1O75955 427 aa18.59■□□□□ 0.57
CHMP3-202ENST00000393773 PLS1Q14651 629 aa18.59■□□□□ 0.57
CHMP3-202ENST00000393773 C1orf53Q5VUE5 145 aa18.59■□□□□ 0.57
CHMP3-202ENST00000393773 DNAJC2Q99543 621 aaKnown RBP18.59■□□□□ 0.57
CHMP3-202ENST00000393773 ARMT1Q9H993 441 aa18.59■□□□□ 0.57
CHMP3-202ENST00000393773 ARHGEF10LQ9HCE6 1279 aa18.59■□□□□ 0.57
CHMP3-202ENST00000393773 TRIM43BA6NCK2 446 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 WDR46O15213 610 aaKnown RBP18.58■□□□□ 0.56
CHMP3-202ENST00000393773 ADCYAP1R1P41586 468 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 TMEM132BQ14DG7 1078 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 SLFNL1Q499Z3 407 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 HSP90AB4PQ58FF6 505 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 PRAMEF19Q5SWL8 479 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 SH3RF1Q7Z6J0 888 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 NCAPG2Q86XI2 1143 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 PANK1Q8TE04 598 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 BADQ92934 168 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms