RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 FERMT2Q96AC1 680 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 CSRNP2Q9H175 543 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 ZNF287Q9HBT7 754 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 SH3GLB2Q9NR46 395 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 HOOK1Q9UJC3 728 aaKnown RBP10.36□□□□□ -0.75
TDP1-202ENST00000393452 SNED1Q8TER0 1413 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 WNT7AO00755 349 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 POLR2DO15514 142 aaKnown RBP10.36□□□□□ -0.75
TDP1-202ENST00000393452 ACTN4O43707 911 aaKnown RBP10.36□□□□□ -0.75
TDP1-202ENST00000393452 NEMFO60524 1076 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 TSPY3P0CV98 308 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 TSPY8P0CW00 308 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 VEGFAP15692 232 aaPredicted RBP10.36□□□□□ -0.75
TDP1-202ENST00000393452 ATP2B1P20020 1258 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 GNAQP50148 359 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 POSTNQ15063 836 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 MAPKAPK5Q8IW41 473 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 LRRC8AQ8IWT6 810 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 SLC44A5Q8NCS7 719 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 SPATA20Q8TB22 786 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 MAD2L2Q9UI95 211 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 ATP6V0A2Q9Y487 856 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 FLT1P17948 1338 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 USP17L3A6NCW0 530 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 USP17L4A6NCW7 530 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 PPEF1O14829 653 aaPredicted RBP10.35□□□□□ -0.75
TDP1-202ENST00000393452 PLSCR1O15162 318 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 FOXN1O15353 648 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 BMP6P22004 513 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 ATP2C1P98194 919 aaPredicted RBP10.35□□□□□ -0.75
TDP1-202ENST00000393452 NOM1Q5C9Z4 860 aaKnown RBP10.35□□□□□ -0.75
TDP1-202ENST00000393452 KANK3Q6NY19 840 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 USP49Q70CQ1 688 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 USP17L1Q7RTZ2 530 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 ZNF444Q8N0Y2 327 aaPredicted RBP10.35□□□□□ -0.75
TDP1-202ENST00000393452 NLGN1Q8N2Q7 840 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 STAG2Q8N3U4 1231 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 AKT1S1Q96B36 256 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 OSBPL5Q9H0X9 879 aaPredicted RBP10.35□□□□□ -0.75
TDP1-202ENST00000393452 SUGT1Q9Y2Z0 365 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 QSER1Q2KHR3 1735 aa10.35□□□□□ -0.75
TDP1-202ENST00000393452 C6orf229H3BNL8 230 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 SRGNP10124 158 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 CALML3P27482 149 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 CDK8P49336 464 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 NLRP5P59047 1200 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 TPM4P67936 248 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 SLC35G1Q2M3R5 365 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 TTC38Q5R3I4 469 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 ISM2Q6H9L7 571 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 TEX11Q8IYF3 940 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 FAM177A1Q8N128 213 aaPredicted RBP10.34□□□□□ -0.75
TDP1-202ENST00000393452 TMEM47Q9BQJ4 181 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 COA1Q9GZY4 146 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 IMPACTQ9P2X3 320 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 SERTAD1Q9UHV2 236 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 PALM3A6NDB9 673 aaPredicted RBP10.34□□□□□ -0.75
TDP1-202ENST00000393452 MYO1BO43795 1136 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 NOVP48745 357 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 MYL5Q02045 173 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 ZNF827Q17R98 1081 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 TRIML1Q8N9V2 468 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 NEDD1Q8NHV4 660 aa10.34□□□□□ -0.75
TDP1-202ENST00000393452 SAP30BPQ9UHR5 308 aaKnown RBP10.34□□□□□ -0.75
TDP1-202ENST00000393452 A0A087X0B3 334 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 M0R2N6 131 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 CYTH3O43739 400 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 MORC3Q14149 939 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 COL23A1Q86Y22 540 aaPredicted RBP10.33□□□□□ -0.76
TDP1-202ENST00000393452 PRIMPOLQ96LW4 560 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 XPO4Q9C0E2 1151 aaKnown RBP10.33□□□□□ -0.76
TDP1-202ENST00000393452 IFNKQ9P0W0 207 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 MAN1B1Q9UKM7 699 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 DAGLAQ9Y4D2 1042 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 ADAMTS3O15072 1205 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 NPR1P16066 1061 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 LMOD1P29536 600 aaPredicted RBP10.33□□□□□ -0.76
TDP1-202ENST00000393452 GSDMDP57764 484 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 GTF2IP78347 998 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 PTGDRQ13258 359 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 ZNF174Q15697 407 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 DNTTIP2Q5QJE6 756 aaKnown RBP10.33□□□□□ -0.76
TDP1-202ENST00000393452 OLFM4Q6UX06 510 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 PIK3AP1Q6ZUJ8 805 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 SH3RF1Q7Z6J0 888 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 BLIDQ8IZY5 108 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 DAGLBQ8NCG7 672 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 EPSTI1Q96J88 318 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 EYA3Q99504 573 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 LZTS2Q9BRK4 669 aa10.33□□□□□ -0.76
TDP1-202ENST00000393452 COL11A2P13942 1736 aaPredicted RBP10.32□□□□□ -0.76
TDP1-202ENST00000393452 PLIN4Q96Q06 1357 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 SLFN14P0C7P3 912 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 FANCCQ00597 558 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 GALNT17Q6IS24 598 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 TYW1BQ6NUM6 668 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 PDILTQ8N807 584 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 MLKLQ8NB16 471 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms