RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CYP2D7A0A087X1C5 515 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 HPDP32754 393 aaPredicted RBP18.42■□□□□ 0.54
PHTF1-205ENST00000393357 GUCY2FP51841 1108 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 IFIT5Q13325 482 aaKnown RBP18.42■□□□□ 0.54
PHTF1-205ENST00000393357 WTAPQ15007 396 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 NTRK3Q16288 839 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 CCDC96Q2M329 555 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 KIRREL3Q8IZU9 778 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 PLBD2Q8NHP8 589 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 NELFBQ8WX92 580 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 SECISBP2LQ93073 1101 aaKnown RBP18.42■□□□□ 0.54
PHTF1-205ENST00000393357 AGPAT5Q9NUQ2 364 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 ABCF2Q9UG63 623 aa18.42■□□□□ 0.54
PHTF1-205ENST00000393357 TRIM75PA6NK02 468 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 KCNJ18B7U540 433 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 PATL2C9JE40 543 aaKnown RBP18.41■□□□□ 0.54
PHTF1-205ENST00000393357 INPP5BP32019 993 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 KCNJ12Q14500 433 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 ANKRD20A12PQ8NF67 263 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 MYCBPQ99417 103 aaPredicted RBP18.41■□□□□ 0.54
PHTF1-205ENST00000393357 UBAC1Q9BSL1 405 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 NCK2O43639 380 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 KRT14P02533 472 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 COPB1P53618 953 aaKnown RBP18.41■□□□□ 0.54
PHTF1-205ENST00000393357 APBA1Q02410 837 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 WHAMMP3Q1A5X7 153 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 MFSD6Q6ZSS7 791 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 SDR42E1Q8WUS8 393 aa18.41■□□□□ 0.54
PHTF1-205ENST00000393357 DMGDHQ9UI17 866 aaKnown RBP18.41■□□□□ 0.54
PHTF1-205ENST00000393357 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 SHTN1A0MZ66 631 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 RCCD1A6NED2 376 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 IRAK1P51617 712 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 TMTC1Q8IUR5 882 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 KCNH5Q8NCM2 988 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 HNRNPLLQ8WVV9 542 aaKnown RBP18.4■□□□□ 0.54
PHTF1-205ENST00000393357 ARL8AQ96BM9 186 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 CAPS2Q9BXY5 557 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 LUC7L2Q9Y383 392 aaKnown RBP18.4■□□□□ 0.54
PHTF1-205ENST00000393357 IGDCC4Q8TDY8 1250 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 PP2D1A8MPX8 630 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 PLEKP08567 350 aaPredicted RBP18.4■□□□□ 0.54
PHTF1-205ENST00000393357 USP14P54578 494 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 ACTN3Q08043 901 aaPredicted RBP18.4■□□□□ 0.54
PHTF1-205ENST00000393357 TCIRG1Q13488 830 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 CEP57Q86XR8 500 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 LRRC1Q9BTT6 524 aa18.4■□□□□ 0.54
PHTF1-205ENST00000393357 REXO2Q9Y3B8 237 aaKnown RBP18.4■□□□□ 0.54
PHTF1-205ENST00000393357 TECPR2O15040 1411 aa18.39■□□□□ 0.54
PHTF1-205ENST00000393357 B4DLN1 442 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 APTXQ7Z2E3 356 aaKnown RBP18.39■□□□□ 0.53
PHTF1-205ENST00000393357 RASGRP4Q8TDF6 673 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 UIMC1Q96RL1 719 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 CD248Q9HCU0 757 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 MED4Q9NPJ6 270 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 BCCIPQ9P287 314 aaKnown RBP eCLIP18.39■□□□□ 0.53
PHTF1-205ENST00000393357 TBC1D2BQ9UPU7 963 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.53
PHTF1-205ENST00000393357 ZSCAN5CA6NGD5 496 aaPredicted RBP18.39■□□□□ 0.53
PHTF1-205ENST00000393357 PHKG2P15735 406 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 PTGDRQ13258 359 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 TTF1Q15361 905 aaPredicted RBP18.39■□□□□ 0.53
PHTF1-205ENST00000393357 RILPL1Q5EBL4 403 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 PIK3AP1Q6ZUJ8 805 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 COG1Q8WTW3 980 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 TRIM47Q96LD4 638 aa18.39■□□□□ 0.53
PHTF1-205ENST00000393357 HNRNPH1P31943 449 aaKnown RBP18.38■□□□□ 0.53
PHTF1-205ENST00000393357 USP5P45974 858 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 SEC24CP53992 1094 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 CCDC181Q5TID7 509 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 MLXIPQ9HAP2 919 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.38■□□□□ 0.53
PHTF1-205ENST00000393357 TACC3Q9Y6A5 838 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 CDHR2Q9BYE9 1310 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 NWD1Q149M9 1564 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 CASP7P55210 303 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 GUCY1A3Q02108 690 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 MMS22LQ6ZRQ5 1243 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 EFCAB13Q8IY85 973 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 AKAP12Q02952 1782 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 KIF13AQ9H1H9 1805 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 PPP1R3GB7ZBB8 358 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 CYP27B1O15528 508 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 BUB1O43683 1085 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 PDE6AP16499 860 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 MAP2K2P36507 400 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 HPS3Q969F9 1004 aa18.38■□□□□ 0.53
PHTF1-205ENST00000393357 KIAA0754O94854 1291 aa18.37■□□□□ 0.53
PHTF1-205ENST00000393357 GREM2Q9H772 168 aa18.37■□□□□ 0.53
PHTF1-205ENST00000393357 A0A087WUV0 522 aaPredicted RBP18.37■□□□□ 0.53
PHTF1-205ENST00000393357 H7C1W4 665 aa18.37■□□□□ 0.53
PHTF1-205ENST00000393357 PLEKHA8P1O95397 391 aa18.37■□□□□ 0.53
PHTF1-205ENST00000393357 TYW1BQ6NUM6 668 aa18.37■□□□□ 0.53
PHTF1-205ENST00000393357 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
PHTF1-205ENST00000393357 NCAPGQ9BPX3 1015 aa18.37■□□□□ 0.53
PHTF1-205ENST00000393357 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 VEGFAP15692 232 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 SARSP49591 514 aaKnown RBP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 PMS1P54277 932 aaKnown RBP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 ARID5AQ03989 594 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms