RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 OATP04181 439 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 RXRAP19793 462 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 EEF1DP29692 281 aaKnown RBP16.2■□□□□ 0.18
CCDC50-201ENST00000392455 MYL5Q02045 173 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 PRPSAP1Q14558 356 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 MCTP2Q6DN12 878 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 JRKLQ9Y4A0 524 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 C14orf93Q9H972 538 aaKnown RBP16.2■□□□□ 0.18
CCDC50-201ENST00000392455 SART1O43290 800 aaKnown RBP16.19■□□□□ 0.18
CCDC50-201ENST00000392455 SERPINB6P35237 376 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 SERPINI1Q99574 410 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 IFT122Q9HBG6 1241 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 LZTFL1Q9NQ48 299 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 RNF113AO15541 343 aaKnown RBP16.19■□□□□ 0.18
CCDC50-201ENST00000392455 DNM2P50570 870 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 ANAPC5Q9UJX4 755 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 BACH1O14867 736 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 LRRC23Q53EV4 343 aaPredicted RBP16.19■□□□□ 0.18
CCDC50-201ENST00000392455 CCDC186Q7Z3E2 898 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 KIF2CQ99661 725 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 LAMC3Q9Y6N6 1575 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 RAPGEF1Q13905 1077 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 MAP7D3Q8IWC1 876 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 TFCP2L1Q9NZI6 479 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 SAP30BPQ9UHR5 308 aaKnown RBP16.19■□□□□ 0.18
CCDC50-201ENST00000392455 GOLGA5Q8TBA6 731 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 TNRQ92752 1358 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 H0YCG3 227 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 LZTS2Q9BRK4 669 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 PKD2L1Q9P0L9 805 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 EIF2AK4Q9P2K8 1649 aaKnown RBP16.19■□□□□ 0.18
CCDC50-201ENST00000392455 NFATC2IPQ8NCF5 419 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 PROCA1Q8NCQ7 364 aaPredicted RBP16.19■□□□□ 0.18
CCDC50-201ENST00000392455 MRPL40Q9NQ50 206 aaKnown RBP16.19■□□□□ 0.18
CCDC50-201ENST00000392455 NSFL1CQ9UNZ2 370 aaKnown RBP16.19■□□□□ 0.18
CCDC50-201ENST00000392455 NOD1Q9Y239 953 aa16.19■□□□□ 0.18
CCDC50-201ENST00000392455 ATP8B2P98198 1209 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 KARSQ15046 597 aaKnown RBP16.18■□□□□ 0.18
CCDC50-201ENST00000392455 BRD3Q15059 726 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 PPP2R5BQ15173 497 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 PATL1Q86TB9 770 aaKnown RBP16.18■□□□□ 0.18
CCDC50-201ENST00000392455 ZNF526Q8TF50 670 aaPredicted RBP16.18■□□□□ 0.18
CCDC50-201ENST00000392455 NOC4LQ9BVI4 516 aaKnown RBP16.18■□□□□ 0.18
CCDC50-201ENST00000392455 PCYT1AP49585 367 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 TPTE2Q6XPS3 522 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 RNF207Q6ZRF8 634 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 JDP2Q8WYK2 163 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 TSC1Q92574 1164 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 RAB3GAP1Q15042 981 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 SNCBQ16143 134 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 SECISBP2LQ93073 1101 aaKnown RBP16.18■□□□□ 0.18
CCDC50-201ENST00000392455 DDX5P17844 614 aaKnown RBP16.18■□□□□ 0.18
CCDC50-201ENST00000392455 TFCP2Q12800 502 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■■■■ 31.4
CCDC50-201ENST00000392455 IRS4O14654 1257 aaPredicted RBP16.18■□□□□ 0.18
CCDC50-201ENST00000392455 PARP1P09874 1014 aaKnown RBP16.18■□□□□ 0.18
CCDC50-201ENST00000392455 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
CCDC50-201ENST00000392455 NEUROG2Q9H2A3 272 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 FGFR1OP2Q9NVK5 253 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 CCDC105Q8IYK2 499 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 ARHGAP45Q92619 1136 aa16.18■□□□□ 0.18
CCDC50-201ENST00000392455 N4BP1O75113 896 aaKnown RBP16.17■□□□□ 0.18
CCDC50-201ENST00000392455 ABCD1P33897 745 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 LONP1P36776 959 aaKnown RBP16.17■□□□□ 0.18
CCDC50-201ENST00000392455 STX1BP61266 288 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 SUN1O94901 812 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 NEK2P51955 445 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 RINT1Q6NUQ1 792 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 INTS4Q96HW7 963 aaKnown RBP16.17■□□□□ 0.18
CCDC50-201ENST00000392455 TRIM45Q9H8W5 580 aaPredicted RBP16.17■□□□□ 0.18
CCDC50-201ENST00000392455 ARHGDIAP52565 204 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 EFCC1Q9HA90 598 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 GNGT2O14610 69 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 UBAP1LF5GYI3 381 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 BBS5Q8N3I7 341 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 MORC4Q8TE76 937 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 KRT4P19013 534 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 POLD1P28340 1107 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 CCDC78A2IDD5 438 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 CREB3L3Q68CJ9 461 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
CCDC50-201ENST00000392455 CTTNBP2Q8WZ74 1663 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 NXNQ6DKJ4 435 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 ZNF212Q9UDV6 495 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 TPX2Q9ULW0 747 aaKnown RBP16.16■□□□□ 0.18
CCDC50-201ENST00000392455 SERPINB2P05120 415 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 CCDC51Q96ER9 411 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 FAM81BQ96LP2 452 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 TRAF5O00463 557 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 EFCAB13Q8IY85 973 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 BAIAP2L1Q9UHR4 511 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 CTNND2Q9UQB3 1225 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 ABCC1P33527 1531 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 KRT9P35527 623 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 PPARGP37231 505 aaPredicted RBP16.16■□□□□ 0.18
CCDC50-201ENST00000392455 RPS6KA1Q15418 735 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 IL2RBP14784 551 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms