RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PPP2R5EQ16537 467 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 CCDC65Q8IXS2 484 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 CSRNP2Q9H175 543 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 SEC31AO94979 1220 aaKnown RBP21.87■■□□□ 1.09
SHANK1-203ENST00000391813 TBC1D31Q96DN5 1066 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 RNF40O75150 1001 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 SETSIPP0DME0 302 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 MAGEA9P43362 315 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 PUM3Q15397 648 aaKnown RBP21.87■■□□□ 1.09
SHANK1-203ENST00000391813 LONRF3Q496Y0 759 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 SYCE1Q8N0S2 351 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 HELBQ8NG08 1087 aaPredicted RBP21.87■■□□□ 1.09
SHANK1-203ENST00000391813 FANCLQ9NW38 375 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 PCDHA7Q9UN72 937 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 RIPOR2Q9Y4F9 1068 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 NOL3O60936 208 aaKnown RBP21.86■■□□□ 1.09
SHANK1-203ENST00000391813 SIK1P57059 783 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 MCUR1Q96AQ8 359 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 RAB17Q9H0T7 212 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 SERPINA10Q9UK55 444 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 FBXO18Q8NFZ0 1043 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 SPATS2LQ9NUQ6 558 aaKnown RBP21.86■■□□□ 1.09
SHANK1-203ENST00000391813 KLHL7Q8IXQ5 586 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 CFAP57Q96MR6 1250 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 FAN1Q9Y2M0 1017 aa21.86■■□□□ 1.09
SHANK1-203ENST00000391813 CTNNA1P35221 906 aaKnown RBP21.85■■□□□ 1.09
SHANK1-203ENST00000391813 RBBP5Q15291 538 aaKnown RBP21.85■■□□□ 1.09
SHANK1-203ENST00000391813 TTC38Q5R3I4 469 aa21.85■■□□□ 1.09
SHANK1-203ENST00000391813 HOMER3Q9NSC5 361 aa21.85■■□□□ 1.09
SHANK1-203ENST00000391813 HIBADHP31937 336 aaKnown RBP21.85■■□□□ 1.09
SHANK1-203ENST00000391813 PLCB3Q01970 1234 aa21.85■■□□□ 1.09
SHANK1-203ENST00000391813 ASIC2Q16515 512 aa21.85■■□□□ 1.09
SHANK1-203ENST00000391813 PHLDB2Q86SQ0 1253 aa21.85■■□□□ 1.09
SHANK1-203ENST00000391813 IL17REQ8NFR9 667 aa21.85■■□□□ 1.09
SHANK1-203ENST00000391813 NELFBQ8WX92 580 aa21.85■■□□□ 1.09
SHANK1-203ENST00000391813 DPP8Q6V1X1 898 aaPredicted RBP21.85■■□□□ 1.09
SHANK1-203ENST00000391813 RIMBP2O15034 1052 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 EIF6P56537 245 aaKnown RBP21.84■■□□□ 1.09
SHANK1-203ENST00000391813 UBL4BQ8N7F7 174 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 DBNDD2Q9BQY9 259 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.84■■□□□ 1.09
SHANK1-203ENST00000391813 B4E1Z4 1266 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.84■■□□□ 1.09
SHANK1-203ENST00000391813 TMEM110-MUSTN1A8MSY1 372 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 GCKRQ14397 625 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 PARP2Q9UGN5 583 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 RNASE9P60153 205 aaKnown RBP21.84■■□□□ 1.09
SHANK1-203ENST00000391813 SPATA1Q5VX52 437 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 RAB3IPQ96QF0 476 aaPredicted RBP21.84■■□□□ 1.09
SHANK1-203ENST00000391813 PARD6BQ9BYG5 372 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 RTEL1Q9NZ71 1219 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 ANAPC4Q9UJX5 808 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 MAPK8IP1Q9UQF2 711 aa21.84■■□□□ 1.09
SHANK1-203ENST00000391813 FLOT1O75955 427 aa21.83■■□□□ 1.09
SHANK1-203ENST00000391813 ATP5JP18859 108 aa21.83■■□□□ 1.09
SHANK1-203ENST00000391813 DNM2P50570 870 aa21.83■■□□□ 1.09
SHANK1-203ENST00000391813 MCTP2Q6DN12 878 aa21.83■■□□□ 1.09
SHANK1-203ENST00000391813 SERTAD1Q9UHV2 236 aa21.83■■□□□ 1.09
SHANK1-203ENST00000391813 MORC2Q9Y6X9 1032 aaPredicted RBP21.83■■□□□ 1.09
SHANK1-203ENST00000391813 ARHGEF2Q92974 986 aaKnown RBP21.83■■□□□ 1.09
SHANK1-203ENST00000391813 DENND2CQ68D51 928 aa21.83■■□□□ 1.08
SHANK1-203ENST00000391813 MMS22LQ6ZRQ5 1243 aa21.83■■□□□ 1.08
SHANK1-203ENST00000391813 HOOK2Q96ED9 719 aa21.83■■□□□ 1.08
SHANK1-203ENST00000391813 EPN1Q9Y6I3 576 aaPredicted RBP21.83■■□□□ 1.08
SHANK1-203ENST00000391813 ADGRB3O60242 1522 aa21.83■■□□□ 1.08
SHANK1-203ENST00000391813 ATP1A2P50993 1020 aa21.83■■□□□ 1.08
SHANK1-203ENST00000391813 SARM1Q6SZW1 724 aa21.83■■□□□ 1.08
SHANK1-203ENST00000391813 RRP36Q96EU6 259 aaKnown RBP21.83■■□□□ 1.08
SHANK1-203ENST00000391813 AGLP35573 1532 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 PTH1RQ03431 593 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 PSMB7Q99436 277 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 NAP1L4Q99733 375 aaKnown RBP21.82■■□□□ 1.08
SHANK1-203ENST00000391813 CETN3O15182 167 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 RGS16O15492 202 aaPredicted RBP21.82■■□□□ 1.08
SHANK1-203ENST00000391813 CCDC62Q6P9F0 684 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 ARMC9Q7Z3E5 817 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 E7EWF7 191 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 LARGE2Q8N3Y3 721 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 CCDC63Q8NA47 563 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 ODF2LQ9ULJ1 636 aa21.82■■□□□ 1.08
SHANK1-203ENST00000391813 EEF2P13639 858 aaKnown RBP21.81■■□□□ 1.08
SHANK1-203ENST00000391813 SH2D4BQ5SQS7 431 aa21.81■■□□□ 1.08
SHANK1-203ENST00000391813 LSG1Q9H089 658 aaKnown RBP21.81■■□□□ 1.08
SHANK1-203ENST00000391813 RCOR1Q9UKL0 485 aa21.81■■□□□ 1.08
SHANK1-203ENST00000391813 SPOPO43791 374 aa21.81■■□□□ 1.08
SHANK1-203ENST00000391813 NDUFA8P51970 172 aa21.81■■□□□ 1.08
SHANK1-203ENST00000391813 KLHL14Q9P2G3 628 aa21.81■■□□□ 1.08
SHANK1-203ENST00000391813 B4DLN1 442 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 ERCC5P28715 1186 aaPredicted RBP21.8■■□□□ 1.08
SHANK1-203ENST00000391813 MRPL12P52815 198 aaKnown RBP21.8■■□□□ 1.08
SHANK1-203ENST00000391813 PLIN2Q99541 437 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 H7C1D1 291 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 KLHL30Q0D2K2 578 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 EPB41P11171 864 aaKnown RBP21.8■■□□□ 1.08
SHANK1-203ENST00000391813 TNFAIP3P21580 790 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 PEX26Q7Z412 305 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 CERKQ8TCT0 537 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 GBP5Q96PP8 586 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 TRIM31Q9BZY9 425 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms