RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TP53P04637 393 aaPredicted RBP4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 CD247P20963 164 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 POLR2BP30876 1174 aaKnown RBP4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 SQSTM1Q13501 440 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 GRIK4Q16099 956 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 NBPF12Q5TAG4 269 aaPredicted RBP4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 Q6ZS46 218 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 ARMCX6Q7L4S7 300 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 FILIP1Q7Z7B0 1213 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 BVESQ8NE79 360 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 WFDC12Q8WWY7 111 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 ZNF775Q96BV0 537 aaPredicted RBP4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 VWCEQ96DN2 955 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 CCDC140Q96MF4 163 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 CDC6Q99741 560 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 HAUS7Q99871 368 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 DHRS4Q9BTZ2 278 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 ASPNQ9BXN1 380 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 WHRNQ9P202 907 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 DIS3Q9Y2L1 958 aaKnown RBP4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 LEMD3Q9Y2U8 911 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 PTCH2Q9Y6C5 1203 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 TRAV20A0A0B4J274 112 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 A0A1W2PQU0 124 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 FAM86C2PA6NEL3 165 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 WIPF1O43516 503 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 ASMTLO95671 621 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 FAM153BP0C7A2 387 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 GLB1P16278 677 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 AUHQ13825 339 aaKnown RBP4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 LETMD1Q6P1Q0 360 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 C7orf61Q8IZ16 206 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 LRRN4CLQ8ND94 238 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 PPP1R13LQ8WUF5 828 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 RNF141Q8WVD5 230 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 FAM46AQ96IP4 442 aaKnown RBP4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 KREMEN1Q96MU8 473 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 PSMG3-AS1Q96PY0 264 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 MKRN2Q9H000 416 aaKnown RBP4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 KANSL2Q9H9L4 492 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 KCNH3Q9ULD8 1083 aa4.18□□□□□ -1.74
TRAJ40-201ENST00000390497 FAM95CA0A1B0GW59 222 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 FAM229AH3BQW9 127 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 ADCY3O60266 1144 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 ALX3O95076 343 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 APPP05067 770 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 EPHX1P07099 455 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 NFICP08651 508 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 FGFR1P11362 822 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 ITGA4P13612 1032 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 IREB2P48200 963 aaKnown RBP4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 MASP1P48740 699 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 FNDC3BQ53EP0 1204 aaKnown RBP4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 NOL9Q5SY16 702 aaKnown RBP4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 AXDND1Q5T1B0 1012 aaPredicted RBP4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 CDPF1Q6NVV7 123 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 PAOXQ6QHF9 649 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 SHISA2Q6UWI4 295 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 DZIP1LQ8IYY4 767 aaKnown RBP4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 AGGF1Q8N302 714 aaeCLIP4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 ARHGEF39Q8N4T4 335 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 DNAJB8Q8NHS0 232 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 XAGE3Q8WTP9 111 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 NINJ1Q92982 152 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 MYRFLQ96LU7 910 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 DPH2Q9BQC3 489 aaPredicted RBP4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 AARSD1Q9BTE6 412 aaKnown RBP4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 KLHL25Q9H0H3 589 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 SEMA6CQ9H3T2 930 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 PRDM10Q9NQV6 1147 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 SUSD2Q9UGT4 822 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 FBXL21Q9UKT6 434 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 SUGT1Q9Y2Z0 365 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 DAGLAQ9Y4D2 1042 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 PCDHB12Q9Y5F1 795 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 COL4A3BPQ9Y5P4 624 aa4.17□□□□□ -1.74
TRAJ40-201ENST00000390497 TRBV23-1A0A0A0MS06 115 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 C9IYK1 514 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 PLD2O14939 933 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 DHX15O43143 795 aaKnown RBP4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 CBFA2T2O43439 604 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 BMP3P12645 472 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 RAB6AP20340 208 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 MAP4P27816 1152 aaKnown RBP4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 RXRBP28702 533 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 HOXC12P31275 282 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 KIR3DL1P43629 444 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 PREPP48147 710 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 ADGRE1Q14246 886 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 NBPF9Q3BBW0 867 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 DALRD3Q5D0E6 543 aaKnown RBP4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 LCE2CQ5TA81 110 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 SEZ6L2Q6UXD5 910 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 NSMFQ6X4W1 530 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 KRT26Q7Z3Y9 468 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 CDH24Q86UP0 819 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 PPFIBP1Q86W92 1011 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 CLEC10AQ8IUN9 316 aa4.16□□□□□ -1.74
TRAJ40-201ENST00000390497 ENOX1Q8TC92 643 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms